Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0579:0555
Extra
PDB:
ATOM 1 O3' A A 578 -11.445 98.951 107.668 1.00 54.79 O
ATOM 2 P A A 579 -10.845 99.368 106.233 1.00 53.05 P
ATOM 3 OP1 A A 579 -11.586 100.589 105.805 1.00 54.50 O
ATOM 4 OP2 A A 579 -10.821 98.166 105.346 1.00 52.66 O
ATOM 5 O5' A A 579 -9.345 99.786 106.567 1.00 53.32 O
ATOM 6 C5' A A 579 -9.067 100.849 107.498 1.00 51.20 C
ATOM 7 C4' A A 579 -7.587 100.913 107.780 1.00 51.24 C
ATOM 8 O4' A A 579 -7.152 99.653 108.366 1.00 51.30 O
ATOM 9 C3' A A 579 -6.695 101.072 106.558 1.00 50.08 C
ATOM 10 O3' A A 579 -6.585 102.432 106.154 1.00 49.79 O
ATOM 11 C2' A A 579 -5.371 100.529 107.070 1.00 49.52 C
ATOM 12 O2' A A 579 -4.741 101.477 107.912 1.00 48.77 O
ATOM 13 C1' A A 579 -5.848 99.334 107.902 1.00 48.49 C
ATOM 14 N9 A A 579 -5.934 98.093 107.127 1.00 45.86 N
ATOM 15 C8 A A 579 -7.064 97.459 106.666 1.00 44.19 C
ATOM 16 N7 A A 579 -6.815 96.352 106.000 1.00 43.95 N
ATOM 17 C5 A A 579 -5.431 96.255 106.017 1.00 41.58 C
ATOM 18 C6 A A 579 -4.541 95.310 105.478 1.00 41.43 C
ATOM 19 N6 A A 579 -4.925 94.257 104.755 1.00 39.72 N
ATOM 20 N1 A A 579 -3.220 95.493 105.697 1.00 41.54 N
ATOM 21 C2 A A 579 -2.829 96.570 106.389 1.00 41.36 C
ATOM 22 N3 A A 579 -3.564 97.540 106.928 1.00 43.02 N
ATOM 23 C4 A A 579 -4.874 97.319 106.709 1.00 44.34 C
ATOM 24 P G A 580 -6.469 102.788 104.592 1.00 48.43 P
ATOM 25 OP1 G A 580 -6.204 104.247 104.505 1.00 49.24 O
ATOM 26 OP2 G A 580 -7.643 102.207 103.881 1.00 49.55 O
ATOM 27 O5' G A 580 -5.183 101.979 104.108 1.00 47.99 O
TER
ATOM 1 O3' A B 554 3.702 89.434 102.439 1.00 40.53 O
ATOM 2 P U B 555 3.037 88.898 103.807 1.00 40.66 P
ATOM 3 OP1 U B 555 3.861 87.763 104.275 1.00 37.55 O
ATOM 4 OP2 U B 555 1.578 88.696 103.558 1.00 41.28 O
ATOM 5 O5' U B 555 3.169 90.113 104.830 1.00 38.32 O
ATOM 6 C5' U B 555 4.423 90.798 105.043 1.00 35.26 C
ATOM 7 C4' U B 555 4.157 92.183 105.574 1.00 34.41 C
ATOM 8 O4' U B 555 3.283 92.867 104.638 1.00 36.88 O
ATOM 9 C3' U B 555 3.399 92.226 106.887 1.00 36.15 C
ATOM 10 O3' U B 555 4.295 92.139 107.985 1.00 40.25 O
ATOM 11 C2' U B 555 2.696 93.576 106.830 1.00 35.36 C
ATOM 12 O2' U B 555 3.532 94.653 107.180 1.00 32.09 O
ATOM 13 C1' U B 555 2.358 93.677 105.342 1.00 36.85 C
ATOM 14 N1 U B 555 0.995 93.237 105.000 1.00 39.23 N
ATOM 15 C2 U B 555 -0.046 94.138 105.207 1.00 39.72 C
ATOM 16 O2 U B 555 0.122 95.257 105.687 1.00 40.61 O
ATOM 17 N3 U B 555 -1.289 93.680 104.837 1.00 38.96 N
ATOM 18 C4 U B 555 -1.595 92.440 104.303 1.00 40.42 C
ATOM 19 O4 U B 555 -2.763 92.192 103.983 1.00 42.40 O
ATOM 20 C5 U B 555 -0.471 91.559 104.139 1.00 38.17 C
ATOM 21 C6 U B 555 0.751 91.974 104.481 1.00 38.31 C
ATOM 22 P G B 556 3.780 91.570 109.400 1.00 41.16 P
ATOM 23 OP1 G B 556 4.782 92.004 110.415 1.00 42.74 O
ATOM 24 OP2 G B 556 3.476 90.124 109.237 1.00 38.16 O
ATOM 25 O5' G B 556 2.435 92.378 109.672 1.00 41.28 O
TER
ATOM 2 P A A 579 -10.845 99.368 106.233 1.00 53.05 P
ATOM 3 OP1 A A 579 -11.586 100.589 105.805 1.00 54.50 O
ATOM 4 OP2 A A 579 -10.821 98.166 105.346 1.00 52.66 O
ATOM 5 O5' A A 579 -9.345 99.786 106.567 1.00 53.32 O
ATOM 6 C5' A A 579 -9.067 100.849 107.498 1.00 51.20 C
ATOM 7 C4' A A 579 -7.587 100.913 107.780 1.00 51.24 C
ATOM 8 O4' A A 579 -7.152 99.653 108.366 1.00 51.30 O
ATOM 9 C3' A A 579 -6.695 101.072 106.558 1.00 50.08 C
ATOM 10 O3' A A 579 -6.585 102.432 106.154 1.00 49.79 O
ATOM 11 C2' A A 579 -5.371 100.529 107.070 1.00 49.52 C
ATOM 12 O2' A A 579 -4.741 101.477 107.912 1.00 48.77 O
ATOM 13 C1' A A 579 -5.848 99.334 107.902 1.00 48.49 C
ATOM 14 N9 A A 579 -5.934 98.093 107.127 1.00 45.86 N
ATOM 15 C8 A A 579 -7.064 97.459 106.666 1.00 44.19 C
ATOM 16 N7 A A 579 -6.815 96.352 106.000 1.00 43.95 N
ATOM 17 C5 A A 579 -5.431 96.255 106.017 1.00 41.58 C
ATOM 18 C6 A A 579 -4.541 95.310 105.478 1.00 41.43 C
ATOM 19 N6 A A 579 -4.925 94.257 104.755 1.00 39.72 N
ATOM 20 N1 A A 579 -3.220 95.493 105.697 1.00 41.54 N
ATOM 21 C2 A A 579 -2.829 96.570 106.389 1.00 41.36 C
ATOM 22 N3 A A 579 -3.564 97.540 106.928 1.00 43.02 N
ATOM 23 C4 A A 579 -4.874 97.319 106.709 1.00 44.34 C
ATOM 24 P G A 580 -6.469 102.788 104.592 1.00 48.43 P
ATOM 25 OP1 G A 580 -6.204 104.247 104.505 1.00 49.24 O
ATOM 26 OP2 G A 580 -7.643 102.207 103.881 1.00 49.55 O
ATOM 27 O5' G A 580 -5.183 101.979 104.108 1.00 47.99 O
TER
ATOM 1 O3' A B 554 3.702 89.434 102.439 1.00 40.53 O
ATOM 2 P U B 555 3.037 88.898 103.807 1.00 40.66 P
ATOM 3 OP1 U B 555 3.861 87.763 104.275 1.00 37.55 O
ATOM 4 OP2 U B 555 1.578 88.696 103.558 1.00 41.28 O
ATOM 5 O5' U B 555 3.169 90.113 104.830 1.00 38.32 O
ATOM 6 C5' U B 555 4.423 90.798 105.043 1.00 35.26 C
ATOM 7 C4' U B 555 4.157 92.183 105.574 1.00 34.41 C
ATOM 8 O4' U B 555 3.283 92.867 104.638 1.00 36.88 O
ATOM 9 C3' U B 555 3.399 92.226 106.887 1.00 36.15 C
ATOM 10 O3' U B 555 4.295 92.139 107.985 1.00 40.25 O
ATOM 11 C2' U B 555 2.696 93.576 106.830 1.00 35.36 C
ATOM 12 O2' U B 555 3.532 94.653 107.180 1.00 32.09 O
ATOM 13 C1' U B 555 2.358 93.677 105.342 1.00 36.85 C
ATOM 14 N1 U B 555 0.995 93.237 105.000 1.00 39.23 N
ATOM 15 C2 U B 555 -0.046 94.138 105.207 1.00 39.72 C
ATOM 16 O2 U B 555 0.122 95.257 105.687 1.00 40.61 O
ATOM 17 N3 U B 555 -1.289 93.680 104.837 1.00 38.96 N
ATOM 18 C4 U B 555 -1.595 92.440 104.303 1.00 40.42 C
ATOM 19 O4 U B 555 -2.763 92.192 103.983 1.00 42.40 O
ATOM 20 C5 U B 555 -0.471 91.559 104.139 1.00 38.17 C
ATOM 21 C6 U B 555 0.751 91.974 104.481 1.00 38.31 C
ATOM 22 P G B 556 3.780 91.570 109.400 1.00 41.16 P
ATOM 23 OP1 G B 556 4.782 92.004 110.415 1.00 42.74 O
ATOM 24 OP2 G B 556 3.476 90.124 109.237 1.00 38.16 O
ATOM 25 O5' G B 556 2.435 92.378 109.672 1.00 41.28 O
TER
Atoms:
OP1: (-11.586,100.589,105.805)
OP2: (-10.821,98.166,105.346)
C3': (-6.695,101.072,106.558)
C1': (-5.848,99.334,107.902)
C5': (-9.067,100.849,107.498)
O4': (-7.152,99.653,108.366)
C8: (-7.064,97.459,106.666)
O2': (-4.741,101.477,107.912)
C6: (-4.541,95.310,105.478)
C5: (-5.431,96.255,106.017)
C4: (-4.874,97.319,106.709)
P: (-10.845,99.368,106.233)
C4': (-7.587,100.913,107.780)
C2': (-5.371,100.529,107.070)
C2: (-2.829,96.570,106.389)
N1: (-3.220,95.493,105.697)
N3: (-3.564,97.540,106.928)
N6: (-4.925,94.257,104.755)
N7: (-6.815,96.352,106.000)
N9: (-5.934,98.093,107.127)
O5': (-9.345,99.786,106.567)
O3': (-6.585,102.432,106.154)
OP2: (-10.821,98.166,105.346)
C3': (-6.695,101.072,106.558)
C1': (-5.848,99.334,107.902)
C5': (-9.067,100.849,107.498)
O4': (-7.152,99.653,108.366)
C8: (-7.064,97.459,106.666)
O2': (-4.741,101.477,107.912)
C6: (-4.541,95.310,105.478)
C5: (-5.431,96.255,106.017)
C4: (-4.874,97.319,106.709)
P: (-10.845,99.368,106.233)
C4': (-7.587,100.913,107.780)
C2': (-5.371,100.529,107.070)
C2: (-2.829,96.570,106.389)
N1: (-3.220,95.493,105.697)
N3: (-3.564,97.540,106.928)
N6: (-4.925,94.257,104.755)
N7: (-6.815,96.352,106.000)
N9: (-5.934,98.093,107.127)
O5': (-9.345,99.786,106.567)
O3': (-6.585,102.432,106.154)
C4: (-1.595,92.440,104.303)
N3: (-1.289,93.680,104.837)
OP1: (3.861,87.763,104.275)
OP2: (1.578,88.696,103.558)
C2: (-0.046,94.138,105.207)
C1': (2.358,93.677,105.342)
C3': (3.399,92.226,106.887)
O5': (3.169,90.113,104.830)
O4': (3.283,92.867,104.638)
C5': (4.423,90.798,105.043)
P: (3.037,88.898,103.807)
C4': (4.157,92.183,105.574)
C2': (2.696,93.576,106.830)
O2': (3.532,94.653,107.180)
N1: (0.995,93.237,105.000)
O4: (-2.763,92.192,103.983)
O2: (0.122,95.257,105.687)
C6: (0.751,91.974,104.481)
C5: (-0.471,91.559,104.139)
O3': (4.295,92.139,107.985)
N3: (-1.289,93.680,104.837)
OP1: (3.861,87.763,104.275)
OP2: (1.578,88.696,103.558)
C2: (-0.046,94.138,105.207)
C1': (2.358,93.677,105.342)
C3': (3.399,92.226,106.887)
O5': (3.169,90.113,104.830)
O4': (3.283,92.867,104.638)
C5': (4.423,90.798,105.043)
P: (3.037,88.898,103.807)
C4': (4.157,92.183,105.574)
C2': (2.696,93.576,106.830)
O2': (3.532,94.653,107.180)
N1: (0.995,93.237,105.000)
O4: (-2.763,92.192,103.983)
O2: (0.122,95.257,105.687)
C6: (0.751,91.974,104.481)
C5: (-0.471,91.559,104.139)
O3': (4.295,92.139,107.985)
Image (generated by PyMOL):