Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0504:017
Extra
PDB:
ATOM 1 O3' C A 503 27.251 148.781 61.252 1.00 50.10 O
ATOM 2 P A A 504 27.713 147.255 61.061 1.00 48.88 P
ATOM 3 OP1 A A 504 27.298 146.535 62.290 1.00 49.95 O
ATOM 4 OP2 A A 504 29.126 147.206 60.630 1.00 49.75 O
ATOM 5 O5' A A 504 26.843 146.726 59.842 1.00 46.87 O
ATOM 6 C5' A A 504 25.579 147.323 59.521 1.00 44.79 C
ATOM 7 C4' A A 504 24.575 146.253 59.201 1.00 41.60 C
ATOM 8 O4' A A 504 25.166 145.345 58.234 1.00 40.62 O
ATOM 9 C3' A A 504 24.178 145.360 60.360 1.00 40.12 C
ATOM 10 O3' A A 504 23.129 145.971 61.112 1.00 40.26 O
ATOM 11 C2' A A 504 23.713 144.107 59.631 1.00 41.34 C
ATOM 12 O2' A A 504 22.443 144.284 59.040 1.00 43.20 O
ATOM 13 C1' A A 504 24.731 144.024 58.491 1.00 41.10 C
ATOM 14 N9 A A 504 25.911 143.210 58.785 1.00 41.05 N
ATOM 15 C8 A A 504 27.200 143.653 58.931 1.00 41.86 C
ATOM 16 N7 A A 504 28.061 142.702 59.189 1.00 42.61 N
ATOM 17 C5 A A 504 27.289 141.552 59.217 1.00 41.01 C
ATOM 18 C6 A A 504 27.616 140.208 59.444 1.00 41.44 C
ATOM 19 N6 A A 504 28.855 139.783 59.692 1.00 42.41 N
ATOM 20 N1 A A 504 26.617 139.304 59.405 1.00 40.51 N
ATOM 21 C2 A A 504 25.378 139.737 59.148 1.00 41.46 C
ATOM 22 N3 A A 504 24.945 140.975 58.917 1.00 40.09 N
ATOM 23 C4 A A 504 25.963 141.847 58.968 1.00 40.55 C
ATOM 24 P U A 505 23.072 145.793 62.713 1.00 40.75 P
ATOM 25 OP1 U A 505 21.812 146.394 63.210 1.00 39.24 O
ATOM 26 OP2 U A 505 24.361 146.248 63.285 1.00 42.10 O
ATOM 27 O5' U A 505 22.955 144.219 62.907 1.00 38.16 O
TER
ATOM 1 O3' U B 16 27.818 130.590 63.863 1.00 31.23 O
ATOM 2 P U B 17 28.179 130.102 62.389 1.00 34.79 P
ATOM 3 OP1 U B 17 28.135 128.621 62.427 1.00 33.29 O
ATOM 4 OP2 U B 17 29.426 130.788 61.963 1.00 35.19 O
ATOM 5 O5' U B 17 26.983 130.674 61.504 1.00 35.26 O
ATOM 6 C5' U B 17 25.613 130.323 61.788 1.00 32.35 C
ATOM 7 C4' U B 17 24.666 131.292 61.122 1.00 30.29 C
ATOM 8 O4' U B 17 24.715 132.583 61.780 1.00 30.10 O
ATOM 9 C3' U B 17 24.965 131.618 59.674 1.00 31.86 C
ATOM 10 O3' U B 17 24.532 130.593 58.794 1.00 34.84 O
ATOM 11 C2' U B 17 24.217 132.929 59.494 1.00 31.95 C
ATOM 12 O2' U B 17 22.823 132.741 59.401 1.00 33.20 O
ATOM 13 C1' U B 17 24.503 133.615 60.828 1.00 31.63 C
ATOM 14 N1 U B 17 25.691 134.489 60.789 1.00 33.19 N
ATOM 15 C2 U B 17 25.511 135.833 60.454 1.00 34.80 C
ATOM 16 O2 U B 17 24.424 136.321 60.199 1.00 37.95 O
ATOM 17 N3 U B 17 26.659 136.584 60.429 1.00 32.41 N
ATOM 18 C4 U B 17 27.934 136.151 60.698 1.00 31.19 C
ATOM 19 O4 U B 17 28.867 136.941 60.613 1.00 28.82 O
ATOM 20 C5 U B 17 28.038 134.766 61.039 1.00 32.49 C
ATOM 21 C6 U B 17 26.945 134.002 61.071 1.00 32.00 C
ATOM 22 P G B 18 25.368 130.300 57.456 1.00 38.90 P
ATOM 23 OP1 G B 18 24.838 129.075 56.809 1.00 36.40 O
ATOM 24 OP2 G B 18 26.808 130.376 57.795 1.00 40.85 O
ATOM 25 O5' G B 18 25.021 131.554 56.543 1.00 39.89 O
TER
ATOM 2 P A A 504 27.713 147.255 61.061 1.00 48.88 P
ATOM 3 OP1 A A 504 27.298 146.535 62.290 1.00 49.95 O
ATOM 4 OP2 A A 504 29.126 147.206 60.630 1.00 49.75 O
ATOM 5 O5' A A 504 26.843 146.726 59.842 1.00 46.87 O
ATOM 6 C5' A A 504 25.579 147.323 59.521 1.00 44.79 C
ATOM 7 C4' A A 504 24.575 146.253 59.201 1.00 41.60 C
ATOM 8 O4' A A 504 25.166 145.345 58.234 1.00 40.62 O
ATOM 9 C3' A A 504 24.178 145.360 60.360 1.00 40.12 C
ATOM 10 O3' A A 504 23.129 145.971 61.112 1.00 40.26 O
ATOM 11 C2' A A 504 23.713 144.107 59.631 1.00 41.34 C
ATOM 12 O2' A A 504 22.443 144.284 59.040 1.00 43.20 O
ATOM 13 C1' A A 504 24.731 144.024 58.491 1.00 41.10 C
ATOM 14 N9 A A 504 25.911 143.210 58.785 1.00 41.05 N
ATOM 15 C8 A A 504 27.200 143.653 58.931 1.00 41.86 C
ATOM 16 N7 A A 504 28.061 142.702 59.189 1.00 42.61 N
ATOM 17 C5 A A 504 27.289 141.552 59.217 1.00 41.01 C
ATOM 18 C6 A A 504 27.616 140.208 59.444 1.00 41.44 C
ATOM 19 N6 A A 504 28.855 139.783 59.692 1.00 42.41 N
ATOM 20 N1 A A 504 26.617 139.304 59.405 1.00 40.51 N
ATOM 21 C2 A A 504 25.378 139.737 59.148 1.00 41.46 C
ATOM 22 N3 A A 504 24.945 140.975 58.917 1.00 40.09 N
ATOM 23 C4 A A 504 25.963 141.847 58.968 1.00 40.55 C
ATOM 24 P U A 505 23.072 145.793 62.713 1.00 40.75 P
ATOM 25 OP1 U A 505 21.812 146.394 63.210 1.00 39.24 O
ATOM 26 OP2 U A 505 24.361 146.248 63.285 1.00 42.10 O
ATOM 27 O5' U A 505 22.955 144.219 62.907 1.00 38.16 O
TER
ATOM 1 O3' U B 16 27.818 130.590 63.863 1.00 31.23 O
ATOM 2 P U B 17 28.179 130.102 62.389 1.00 34.79 P
ATOM 3 OP1 U B 17 28.135 128.621 62.427 1.00 33.29 O
ATOM 4 OP2 U B 17 29.426 130.788 61.963 1.00 35.19 O
ATOM 5 O5' U B 17 26.983 130.674 61.504 1.00 35.26 O
ATOM 6 C5' U B 17 25.613 130.323 61.788 1.00 32.35 C
ATOM 7 C4' U B 17 24.666 131.292 61.122 1.00 30.29 C
ATOM 8 O4' U B 17 24.715 132.583 61.780 1.00 30.10 O
ATOM 9 C3' U B 17 24.965 131.618 59.674 1.00 31.86 C
ATOM 10 O3' U B 17 24.532 130.593 58.794 1.00 34.84 O
ATOM 11 C2' U B 17 24.217 132.929 59.494 1.00 31.95 C
ATOM 12 O2' U B 17 22.823 132.741 59.401 1.00 33.20 O
ATOM 13 C1' U B 17 24.503 133.615 60.828 1.00 31.63 C
ATOM 14 N1 U B 17 25.691 134.489 60.789 1.00 33.19 N
ATOM 15 C2 U B 17 25.511 135.833 60.454 1.00 34.80 C
ATOM 16 O2 U B 17 24.424 136.321 60.199 1.00 37.95 O
ATOM 17 N3 U B 17 26.659 136.584 60.429 1.00 32.41 N
ATOM 18 C4 U B 17 27.934 136.151 60.698 1.00 31.19 C
ATOM 19 O4 U B 17 28.867 136.941 60.613 1.00 28.82 O
ATOM 20 C5 U B 17 28.038 134.766 61.039 1.00 32.49 C
ATOM 21 C6 U B 17 26.945 134.002 61.071 1.00 32.00 C
ATOM 22 P G B 18 25.368 130.300 57.456 1.00 38.90 P
ATOM 23 OP1 G B 18 24.838 129.075 56.809 1.00 36.40 O
ATOM 24 OP2 G B 18 26.808 130.376 57.795 1.00 40.85 O
ATOM 25 O5' G B 18 25.021 131.554 56.543 1.00 39.89 O
TER
Atoms:
OP1: (27.298,146.535,62.290)
OP2: (29.126,147.206,60.630)
C3': (24.178,145.360,60.360)
C1': (24.731,144.024,58.491)
C5': (25.579,147.323,59.521)
O4': (25.166,145.345,58.234)
C8: (27.200,143.653,58.931)
O2': (22.443,144.284,59.040)
C6: (27.616,140.208,59.444)
C5: (27.289,141.552,59.217)
C4: (25.963,141.847,58.968)
P: (27.713,147.255,61.061)
C4': (24.575,146.253,59.201)
C2': (23.713,144.107,59.631)
C2: (25.378,139.737,59.148)
N1: (26.617,139.304,59.405)
N3: (24.945,140.975,58.917)
N6: (28.855,139.783,59.692)
N7: (28.061,142.702,59.189)
N9: (25.911,143.210,58.785)
O5': (26.843,146.726,59.842)
O3': (23.129,145.971,61.112)
OP2: (29.126,147.206,60.630)
C3': (24.178,145.360,60.360)
C1': (24.731,144.024,58.491)
C5': (25.579,147.323,59.521)
O4': (25.166,145.345,58.234)
C8: (27.200,143.653,58.931)
O2': (22.443,144.284,59.040)
C6: (27.616,140.208,59.444)
C5: (27.289,141.552,59.217)
C4: (25.963,141.847,58.968)
P: (27.713,147.255,61.061)
C4': (24.575,146.253,59.201)
C2': (23.713,144.107,59.631)
C2: (25.378,139.737,59.148)
N1: (26.617,139.304,59.405)
N3: (24.945,140.975,58.917)
N6: (28.855,139.783,59.692)
N7: (28.061,142.702,59.189)
N9: (25.911,143.210,58.785)
O5': (26.843,146.726,59.842)
O3': (23.129,145.971,61.112)
C4: (27.934,136.151,60.698)
N3: (26.659,136.584,60.429)
OP1: (28.135,128.621,62.427)
OP2: (29.426,130.788,61.963)
C2: (25.511,135.833,60.454)
C1': (24.503,133.615,60.828)
C3': (24.965,131.618,59.674)
O5': (26.983,130.674,61.504)
O4': (24.715,132.583,61.780)
C5': (25.613,130.323,61.788)
P: (28.179,130.102,62.389)
C4': (24.666,131.292,61.122)
C2': (24.217,132.929,59.494)
O2': (22.823,132.741,59.401)
N1: (25.691,134.489,60.789)
O4: (28.867,136.941,60.613)
O2: (24.424,136.321,60.199)
C6: (26.945,134.002,61.071)
C5: (28.038,134.766,61.039)
O3': (24.532,130.593,58.794)
N3: (26.659,136.584,60.429)
OP1: (28.135,128.621,62.427)
OP2: (29.426,130.788,61.963)
C2: (25.511,135.833,60.454)
C1': (24.503,133.615,60.828)
C3': (24.965,131.618,59.674)
O5': (26.983,130.674,61.504)
O4': (24.715,132.583,61.780)
C5': (25.613,130.323,61.788)
P: (28.179,130.102,62.389)
C4': (24.666,131.292,61.122)
C2': (24.217,132.929,59.494)
O2': (22.823,132.741,59.401)
N1: (25.691,134.489,60.789)
O4: (28.867,136.941,60.613)
O2: (24.424,136.321,60.199)
C6: (26.945,134.002,61.071)
C5: (28.038,134.766,61.039)
O3': (24.532,130.593,58.794)
Image (generated by PyMOL):