ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1S72:0579:0555

Extra

PDB:
ATOM 1 O3' A A 578 -11.490 99.661 107.422 1.00 58.94 O
ATOM 2 P A A 579 -10.895 100.105 105.996 1.00 60.72 P
ATOM 3 OP1 A A 579 -11.572 101.369 105.599 1.00 61.33 O
ATOM 4 OP2 A A 579 -10.955 98.921 105.087 1.00 59.23 O
ATOM 5 O5' A A 579 -9.369 100.451 106.321 1.00 59.90 O
ATOM 6 C5' A A 579 -9.027 101.478 107.286 1.00 57.09 C
ATOM 7 C4' A A 579 -7.546 101.432 107.621 1.00 56.29 C
ATOM 8 O4' A A 579 -7.199 100.113 108.130 1.00 54.98 O
ATOM 9 C3' A A 579 -6.577 101.643 106.466 1.00 54.82 C
ATOM 10 O3' A A 579 -6.371 103.024 106.189 1.00 54.09 O
ATOM 11 C2' A A 579 -5.312 100.984 106.993 1.00 53.34 C
ATOM 12 O2' A A 579 -4.655 101.802 107.939 1.00 55.01 O
ATOM 13 C1' A A 579 -5.892 99.761 107.704 1.00 51.04 C
ATOM 14 N9 A A 579 -6.008 98.608 106.813 1.00 47.73 N
ATOM 15 C8 A A 579 -7.148 98.099 106.245 1.00 46.13 C
ATOM 16 N7 A A 579 -6.937 97.055 105.483 1.00 46.93 N
ATOM 17 C5 A A 579 -5.564 96.866 105.550 1.00 44.98 C
ATOM 18 C6 A A 579 -4.710 95.924 104.953 1.00 44.45 C
ATOM 19 N6 A A 579 -5.126 94.969 104.123 1.00 41.53 N
ATOM 20 N1 A A 579 -3.393 96.005 105.234 1.00 44.08 N
ATOM 21 C2 A A 579 -2.971 96.978 106.048 1.00 45.11 C
ATOM 22 N3 A A 579 -3.671 97.928 106.659 1.00 46.05 N
ATOM 23 C4 A A 579 -4.980 97.813 106.367 1.00 46.42 C
ATOM 24 P G A 580 -6.319 103.529 104.665 1.00 52.95 P
ATOM 25 OP1 G A 580 -5.949 104.966 104.728 1.00 53.30 O
ATOM 26 OP2 G A 580 -7.564 103.118 103.968 1.00 54.60 O
ATOM 27 O5' G A 580 -5.127 102.691 104.020 1.00 52.86 O
TER

ATOM 1 O3' A B 554 3.558 89.962 102.040 1.00 38.86 O
ATOM 2 P U B 555 2.965 89.421 103.430 1.00 38.02 P
ATOM 3 OP1 U B 555 3.871 88.358 103.911 1.00 35.02 O
ATOM 4 OP2 U B 555 1.531 89.114 103.205 1.00 38.37 O
ATOM 5 O5' U B 555 3.042 90.679 104.406 1.00 36.26 O
ATOM 6 C5' U B 555 4.284 91.360 104.661 1.00 36.13 C
ATOM 7 C4' U B 555 4.012 92.732 105.230 1.00 36.38 C
ATOM 8 O4' U B 555 3.166 93.445 104.300 1.00 38.24 O
ATOM 9 C3' U B 555 3.240 92.751 106.534 1.00 37.26 C
ATOM 10 O3' U B 555 4.112 92.632 107.654 1.00 39.43 O
ATOM 11 C2' U B 555 2.539 94.101 106.497 1.00 37.43 C
ATOM 12 O2' U B 555 3.353 95.178 106.908 1.00 35.47 O
ATOM 13 C1' U B 555 2.227 94.233 105.007 1.00 39.31 C
ATOM 14 N1 U B 555 0.872 93.807 104.617 1.00 41.44 N
ATOM 15 C2 U B 555 -0.160 94.731 104.751 1.00 43.01 C
ATOM 16 O2 U B 555 0.004 95.854 105.218 1.00 42.70 O
ATOM 17 N3 U B 555 -1.390 94.290 104.324 1.00 42.67 N
ATOM 18 C4 U B 555 -1.692 93.048 103.801 1.00 44.58 C
ATOM 19 O4 U B 555 -2.843 92.813 103.427 1.00 46.77 O
ATOM 20 C5 U B 555 -0.580 92.144 103.719 1.00 43.85 C
ATOM 21 C6 U B 555 0.630 92.543 104.120 1.00 41.38 C
ATOM 22 P G B 556 3.560 92.007 109.026 1.00 38.46 P
ATOM 23 OP1 G B 556 4.513 92.324 110.115 1.00 37.31 O
ATOM 24 OP2 G B 556 3.208 90.584 108.748 1.00 35.55 O
ATOM 25 O5' G B 556 2.230 92.840 109.289 1.00 38.37 O
TER

Atoms:
OP1: (-11.572,101.369,105.599)
OP2: (-10.955,98.921,105.087)
C3': (-6.577,101.643,106.466)
C1': (-5.892,99.761,107.704)
C5': (-9.027,101.478,107.286)
O4': (-7.199,100.113,108.130)
C8: (-7.148,98.099,106.245)
O2': (-4.655,101.802,107.939)
C6: (-4.710,95.924,104.953)
C5: (-5.564,96.866,105.550)
C4: (-4.980,97.813,106.367)
P: (-10.895,100.105,105.996)
C4': (-7.546,101.432,107.621)
C2': (-5.312,100.984,106.993)
C2: (-2.971,96.978,106.048)
N1: (-3.393,96.005,105.234)
N3: (-3.671,97.928,106.659)
N6: (-5.126,94.969,104.123)
N7: (-6.937,97.055,105.483)
N9: (-6.008,98.608,106.813)
O5': (-9.369,100.451,106.321)
O3': (-6.371,103.024,106.189)
C4: (-1.692,93.048,103.801)
N3: (-1.390,94.290,104.324)
OP1: (3.871,88.358,103.911)
OP2: (1.531,89.114,103.205)
C2: (-0.160,94.731,104.751)
C1': (2.227,94.233,105.007)
C3': (3.240,92.751,106.534)
O5': (3.042,90.679,104.406)
O4': (3.166,93.445,104.300)
C5': (4.284,91.360,104.661)
P: (2.965,89.421,103.430)
C4': (4.012,92.732,105.230)
C2': (2.539,94.101,106.497)
O2': (3.353,95.178,106.908)
N1: (0.872,93.807,104.617)
O4: (-2.843,92.813,103.427)
O2: (0.004,95.854,105.218)
C6: (0.630,92.543,104.120)
C5: (-0.580,92.144,103.719)
O3': (4.112,92.632,107.654)
Image (generated by PyMOL):
PyMOL image
show in jmol