Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q3Z:A40:A23
Extra
PDB:
ATOM 1 O3' G A 39 -9.163 8.544 -11.258 1.00 63.11 O
ATOM 2 P A A 40 -9.847 7.882 -12.544 1.00 59.91 P
ATOM 3 OP1 A A 40 -9.887 8.929 -13.589 1.00 64.02 O
ATOM 4 OP2 A A 40 -11.089 7.198 -12.132 1.00 62.72 O
ATOM 5 O5' A A 40 -8.806 6.758 -12.986 1.00 56.35 O
ATOM 6 C5' A A 40 -7.493 7.124 -13.373 1.00 54.37 C
ATOM 7 C4' A A 40 -6.624 5.894 -13.571 1.00 55.78 C
ATOM 8 O4' A A 40 -6.425 5.212 -12.306 1.00 52.34 O
ATOM 9 C3' A A 40 -7.201 4.823 -14.484 1.00 53.94 C
ATOM 10 O3' A A 40 -7.021 5.161 -15.849 1.00 57.63 O
ATOM 11 C2' A A 40 -6.383 3.614 -14.049 1.00 61.62 C
ATOM 12 O2' A A 40 -5.083 3.581 -14.606 1.00 59.33 O
ATOM 13 C1' A A 40 -6.362 3.814 -12.533 1.00 58.14 C
ATOM 14 N9 A A 40 -7.496 3.165 -11.874 1.00 62.32 N
ATOM 15 C8 A A 40 -8.654 3.742 -11.418 1.00 61.56 C
ATOM 16 N7 A A 40 -9.498 2.895 -10.876 1.00 57.90 N
ATOM 17 C5 A A 40 -8.853 1.676 -10.987 1.00 61.55 C
ATOM 18 C6 A A 40 -9.218 0.370 -10.603 1.00 63.66 C
ATOM 19 N6 A A 40 -10.376 0.077 -9.998 1.00 58.50 N
ATOM 20 N1 A A 40 -8.342 -0.628 -10.863 1.00 63.60 N
ATOM 21 C2 A A 40 -7.182 -0.331 -11.464 1.00 61.85 C
ATOM 22 N3 A A 40 -6.734 0.855 -11.870 1.00 65.05 N
ATOM 23 C4 A A 40 -7.622 1.824 -11.601 1.00 61.35 C
ATOM 24 P C A 41 -8.100 4.747 -16.963 1.00 59.14 P
ATOM 25 OP1 C A 41 -7.722 5.395 -18.236 1.00 64.60 O
ATOM 26 OP2 C A 41 -9.449 4.966 -16.403 1.00 64.16 O
ATOM 27 O5' C A 41 -7.851 3.183 -17.143 1.00 61.11 O
TER
ATOM 1 O3' G B 22 -10.835 -10.283 -9.165 1.00 84.41 O
ATOM 2 P U B 23 -9.974 -9.769 -7.915 1.00 89.37 P
ATOM 3 OP1 U B 23 -9.430 -10.965 -7.227 1.00 89.92 O
ATOM 4 OP2 U B 23 -10.774 -8.783 -7.154 1.00 84.50 O
ATOM 5 O5' U B 23 -8.778 -8.983 -8.626 1.00 82.05 O
ATOM 6 C5' U B 23 -7.880 -9.672 -9.487 1.00 87.02 C
ATOM 7 C4' U B 23 -6.971 -8.702 -10.220 1.00 85.30 C
ATOM 8 O4' U B 23 -7.765 -7.838 -11.072 1.00 81.83 O
ATOM 9 C3' U B 23 -6.182 -7.743 -9.341 1.00 84.59 C
ATOM 10 O3' U B 23 -5.004 -8.357 -8.817 1.00 85.22 O
ATOM 11 C2' U B 23 -5.879 -6.624 -10.329 1.00 83.31 C
ATOM 12 O2' U B 23 -4.780 -6.903 -11.175 1.00 88.53 O
ATOM 13 C1' U B 23 -7.176 -6.549 -11.130 1.00 77.71 C
ATOM 14 N1 U B 23 -8.138 -5.512 -10.611 1.00 72.09 N
ATOM 15 C2 U B 23 -7.921 -4.179 -10.918 1.00 70.75 C
ATOM 16 O2 U B 23 -6.983 -3.790 -11.589 1.00 66.78 O
ATOM 17 N3 U B 23 -8.852 -3.306 -10.404 1.00 68.60 N
ATOM 18 C4 U B 23 -9.954 -3.620 -9.623 1.00 71.14 C
ATOM 19 O4 U B 23 -10.706 -2.732 -9.230 1.00 67.75 O
ATOM 20 C5 U B 23 -10.117 -5.023 -9.345 1.00 69.69 C
ATOM 21 C6 U B 23 -9.222 -5.890 -9.835 1.00 69.76 C
ATOM 22 P U B 24 -4.340 -7.816 -7.460 1.00 88.60 P
ATOM 23 OP1 U B 24 -3.063 -8.532 -7.247 1.00 87.27 O
ATOM 24 OP2 U B 24 -5.376 -7.844 -6.405 1.00 86.40 O
ATOM 25 O5' U B 24 -4.028 -6.286 -7.809 1.00 84.15 O
TER
ATOM 2 P A A 40 -9.847 7.882 -12.544 1.00 59.91 P
ATOM 3 OP1 A A 40 -9.887 8.929 -13.589 1.00 64.02 O
ATOM 4 OP2 A A 40 -11.089 7.198 -12.132 1.00 62.72 O
ATOM 5 O5' A A 40 -8.806 6.758 -12.986 1.00 56.35 O
ATOM 6 C5' A A 40 -7.493 7.124 -13.373 1.00 54.37 C
ATOM 7 C4' A A 40 -6.624 5.894 -13.571 1.00 55.78 C
ATOM 8 O4' A A 40 -6.425 5.212 -12.306 1.00 52.34 O
ATOM 9 C3' A A 40 -7.201 4.823 -14.484 1.00 53.94 C
ATOM 10 O3' A A 40 -7.021 5.161 -15.849 1.00 57.63 O
ATOM 11 C2' A A 40 -6.383 3.614 -14.049 1.00 61.62 C
ATOM 12 O2' A A 40 -5.083 3.581 -14.606 1.00 59.33 O
ATOM 13 C1' A A 40 -6.362 3.814 -12.533 1.00 58.14 C
ATOM 14 N9 A A 40 -7.496 3.165 -11.874 1.00 62.32 N
ATOM 15 C8 A A 40 -8.654 3.742 -11.418 1.00 61.56 C
ATOM 16 N7 A A 40 -9.498 2.895 -10.876 1.00 57.90 N
ATOM 17 C5 A A 40 -8.853 1.676 -10.987 1.00 61.55 C
ATOM 18 C6 A A 40 -9.218 0.370 -10.603 1.00 63.66 C
ATOM 19 N6 A A 40 -10.376 0.077 -9.998 1.00 58.50 N
ATOM 20 N1 A A 40 -8.342 -0.628 -10.863 1.00 63.60 N
ATOM 21 C2 A A 40 -7.182 -0.331 -11.464 1.00 61.85 C
ATOM 22 N3 A A 40 -6.734 0.855 -11.870 1.00 65.05 N
ATOM 23 C4 A A 40 -7.622 1.824 -11.601 1.00 61.35 C
ATOM 24 P C A 41 -8.100 4.747 -16.963 1.00 59.14 P
ATOM 25 OP1 C A 41 -7.722 5.395 -18.236 1.00 64.60 O
ATOM 26 OP2 C A 41 -9.449 4.966 -16.403 1.00 64.16 O
ATOM 27 O5' C A 41 -7.851 3.183 -17.143 1.00 61.11 O
TER
ATOM 1 O3' G B 22 -10.835 -10.283 -9.165 1.00 84.41 O
ATOM 2 P U B 23 -9.974 -9.769 -7.915 1.00 89.37 P
ATOM 3 OP1 U B 23 -9.430 -10.965 -7.227 1.00 89.92 O
ATOM 4 OP2 U B 23 -10.774 -8.783 -7.154 1.00 84.50 O
ATOM 5 O5' U B 23 -8.778 -8.983 -8.626 1.00 82.05 O
ATOM 6 C5' U B 23 -7.880 -9.672 -9.487 1.00 87.02 C
ATOM 7 C4' U B 23 -6.971 -8.702 -10.220 1.00 85.30 C
ATOM 8 O4' U B 23 -7.765 -7.838 -11.072 1.00 81.83 O
ATOM 9 C3' U B 23 -6.182 -7.743 -9.341 1.00 84.59 C
ATOM 10 O3' U B 23 -5.004 -8.357 -8.817 1.00 85.22 O
ATOM 11 C2' U B 23 -5.879 -6.624 -10.329 1.00 83.31 C
ATOM 12 O2' U B 23 -4.780 -6.903 -11.175 1.00 88.53 O
ATOM 13 C1' U B 23 -7.176 -6.549 -11.130 1.00 77.71 C
ATOM 14 N1 U B 23 -8.138 -5.512 -10.611 1.00 72.09 N
ATOM 15 C2 U B 23 -7.921 -4.179 -10.918 1.00 70.75 C
ATOM 16 O2 U B 23 -6.983 -3.790 -11.589 1.00 66.78 O
ATOM 17 N3 U B 23 -8.852 -3.306 -10.404 1.00 68.60 N
ATOM 18 C4 U B 23 -9.954 -3.620 -9.623 1.00 71.14 C
ATOM 19 O4 U B 23 -10.706 -2.732 -9.230 1.00 67.75 O
ATOM 20 C5 U B 23 -10.117 -5.023 -9.345 1.00 69.69 C
ATOM 21 C6 U B 23 -9.222 -5.890 -9.835 1.00 69.76 C
ATOM 22 P U B 24 -4.340 -7.816 -7.460 1.00 88.60 P
ATOM 23 OP1 U B 24 -3.063 -8.532 -7.247 1.00 87.27 O
ATOM 24 OP2 U B 24 -5.376 -7.844 -6.405 1.00 86.40 O
ATOM 25 O5' U B 24 -4.028 -6.286 -7.809 1.00 84.15 O
TER
Atoms:
OP1: (-9.887,8.929,-13.589)
OP2: (-11.089,7.198,-12.132)
C3': (-7.201,4.823,-14.484)
C1': (-6.362,3.814,-12.533)
C5': (-7.493,7.124,-13.373)
O4': (-6.425,5.212,-12.306)
C8: (-8.654,3.742,-11.418)
O2': (-5.083,3.581,-14.606)
C6: (-9.218,0.370,-10.603)
C5: (-8.853,1.676,-10.987)
C4: (-7.622,1.824,-11.601)
P: (-9.847,7.882,-12.544)
C4': (-6.624,5.894,-13.571)
C2': (-6.383,3.614,-14.049)
C2: (-7.182,-0.331,-11.464)
N1: (-8.342,-0.628,-10.863)
N3: (-6.734,0.855,-11.870)
N6: (-10.376,0.077,-9.998)
N7: (-9.498,2.895,-10.876)
N9: (-7.496,3.165,-11.874)
O5': (-8.806,6.758,-12.986)
O3': (-7.021,5.161,-15.849)
OP2: (-11.089,7.198,-12.132)
C3': (-7.201,4.823,-14.484)
C1': (-6.362,3.814,-12.533)
C5': (-7.493,7.124,-13.373)
O4': (-6.425,5.212,-12.306)
C8: (-8.654,3.742,-11.418)
O2': (-5.083,3.581,-14.606)
C6: (-9.218,0.370,-10.603)
C5: (-8.853,1.676,-10.987)
C4: (-7.622,1.824,-11.601)
P: (-9.847,7.882,-12.544)
C4': (-6.624,5.894,-13.571)
C2': (-6.383,3.614,-14.049)
C2: (-7.182,-0.331,-11.464)
N1: (-8.342,-0.628,-10.863)
N3: (-6.734,0.855,-11.870)
N6: (-10.376,0.077,-9.998)
N7: (-9.498,2.895,-10.876)
N9: (-7.496,3.165,-11.874)
O5': (-8.806,6.758,-12.986)
O3': (-7.021,5.161,-15.849)
C4: (-9.954,-3.620,-9.623)
N3: (-8.852,-3.306,-10.404)
OP1: (-9.430,-10.965,-7.227)
OP2: (-10.774,-8.783,-7.154)
C2: (-7.921,-4.179,-10.918)
C1': (-7.176,-6.549,-11.130)
C3': (-6.182,-7.743,-9.341)
O5': (-8.778,-8.983,-8.626)
O4': (-7.765,-7.838,-11.072)
C5': (-7.880,-9.672,-9.487)
P: (-9.974,-9.769,-7.915)
C4': (-6.971,-8.702,-10.220)
C2': (-5.879,-6.624,-10.329)
O2': (-4.780,-6.903,-11.175)
N1: (-8.138,-5.512,-10.611)
O4: (-10.706,-2.732,-9.230)
O2: (-6.983,-3.790,-11.589)
C6: (-9.222,-5.890,-9.835)
C5: (-10.117,-5.023,-9.345)
O3': (-5.004,-8.357,-8.817)
N3: (-8.852,-3.306,-10.404)
OP1: (-9.430,-10.965,-7.227)
OP2: (-10.774,-8.783,-7.154)
C2: (-7.921,-4.179,-10.918)
C1': (-7.176,-6.549,-11.130)
C3': (-6.182,-7.743,-9.341)
O5': (-8.778,-8.983,-8.626)
O4': (-7.765,-7.838,-11.072)
C5': (-7.880,-9.672,-9.487)
P: (-9.974,-9.769,-7.915)
C4': (-6.971,-8.702,-10.220)
C2': (-5.879,-6.624,-10.329)
O2': (-4.780,-6.903,-11.175)
N1: (-8.138,-5.512,-10.611)
O4: (-10.706,-2.732,-9.230)
O2: (-6.983,-3.790,-11.589)
C6: (-9.222,-5.890,-9.835)
C5: (-10.117,-5.023,-9.345)
O3': (-5.004,-8.357,-8.817)
Image (generated by PyMOL):