Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11859:11881
Extra
PDB:
ATOM 1 O3' G A1858 -1.649 45.731 95.364 1.00 49.04 O
ATOM 2 P A A1859 -3.008 45.010 95.716 1.00 51.19 P
ATOM 3 OP1 A A1859 -2.751 44.120 96.882 1.00 51.03 O
ATOM 4 OP2 A A1859 -3.488 44.415 94.469 1.00 50.86 O
ATOM 5 O5' A A1859 -3.960 46.217 96.132 1.00 51.91 O
ATOM 6 C5' A A1859 -3.568 47.142 97.135 1.00 52.35 C
ATOM 7 C4' A A1859 -4.161 48.505 96.899 1.00 52.96 C
ATOM 8 O4' A A1859 -3.724 49.024 95.626 1.00 52.84 O
ATOM 9 C3' A A1859 -5.669 48.564 96.802 1.00 53.28 C
ATOM 10 O3' A A1859 -6.313 48.482 98.071 1.00 53.63 O
ATOM 11 C2' A A1859 -5.899 49.884 96.056 1.00 53.72 C
ATOM 12 O2' A A1859 -5.781 51.014 96.940 1.00 54.30 O
ATOM 13 C1' A A1859 -4.702 49.893 95.103 1.00 53.29 C
ATOM 14 N9 A A1859 -5.041 49.488 93.710 1.00 52.97 N
ATOM 15 C8 A A1859 -4.870 48.314 92.988 1.00 52.37 C
ATOM 16 N7 A A1859 -5.274 48.364 91.734 1.00 52.28 N
ATOM 17 C5 A A1859 -5.726 49.651 91.640 1.00 52.86 C
ATOM 18 C6 A A1859 -6.270 50.342 90.595 1.00 53.11 C
ATOM 19 N6 A A1859 -6.460 49.824 89.405 1.00 52.78 N
ATOM 20 N1 A A1859 -6.612 51.626 90.808 1.00 53.73 N
ATOM 21 C2 A A1859 -6.425 52.188 92.010 1.00 54.09 C
ATOM 22 N3 A A1859 -5.937 51.629 93.096 1.00 53.93 N
ATOM 23 C4 A A1859 -5.594 50.355 92.813 1.00 53.29 C
ATOM 24 P U A1860 -7.781 47.863 98.182 1.00 55.56 P
ATOM 25 OP1 U A1860 -8.084 47.696 99.622 1.00 55.85 O
ATOM 26 OP2 U A1860 -7.822 46.675 97.319 1.00 54.96 O
ATOM 27 O5' U A1860 -8.677 49.028 97.562 1.00 56.10 O
TER
ATOM 1 O3' A B1880 -12.519 55.675 83.731 1.00 63.41 O
ATOM 2 P U B1881 -11.070 56.329 83.480 1.00 66.68 P
ATOM 3 OP1 U B1881 -11.271 57.548 82.672 1.00 67.19 O
ATOM 4 OP2 U B1881 -10.203 55.275 82.937 1.00 65.95 O
ATOM 5 O5' U B1881 -10.614 56.719 84.959 1.00 66.88 O
ATOM 6 C5' U B1881 -11.506 57.376 85.841 1.00 67.49 C
ATOM 7 C4' U B1881 -11.145 57.134 87.286 1.00 67.46 C
ATOM 8 O4' U B1881 -11.246 55.723 87.597 1.00 66.91 O
ATOM 9 C3' U B1881 -9.728 57.494 87.689 1.00 67.32 C
ATOM 10 O3' U B1881 -9.552 58.868 87.929 1.00 67.92 O
ATOM 11 C2' U B1881 -9.490 56.630 88.924 1.00 67.04 C
ATOM 12 O2' U B1881 -10.027 57.239 90.085 1.00 67.59 O
ATOM 13 C1' U B1881 -10.311 55.384 88.600 1.00 66.66 C
ATOM 14 N1 U B1881 -9.469 54.275 88.112 1.00 65.92 N
ATOM 15 C2 U B1881 -8.787 53.554 89.071 1.00 65.57 C
ATOM 16 O2 U B1881 -8.839 53.779 90.268 1.00 65.84 O
ATOM 17 N3 U B1881 -8.051 52.539 88.554 1.00 64.91 N
ATOM 18 C4 U B1881 -7.948 52.190 87.235 1.00 64.58 C
ATOM 19 O4 U B1881 -7.230 51.232 86.968 1.00 63.99 O
ATOM 20 C5 U B1881 -8.658 52.981 86.291 1.00 64.96 C
ATOM 21 C6 U B1881 -9.386 53.979 86.766 1.00 65.61 C
ATOM 22 P U B1882 -8.124 59.537 87.696 1.00 62.11 P
ATOM 23 OP1 U B1882 -8.309 61.013 87.844 1.00 62.85 O
ATOM 24 OP2 U B1882 -7.572 58.992 86.410 1.00 61.57 O
ATOM 25 O5' U B1882 -7.261 58.984 88.904 1.00 61.81 O
TER
ATOM 2 P A A1859 -3.008 45.010 95.716 1.00 51.19 P
ATOM 3 OP1 A A1859 -2.751 44.120 96.882 1.00 51.03 O
ATOM 4 OP2 A A1859 -3.488 44.415 94.469 1.00 50.86 O
ATOM 5 O5' A A1859 -3.960 46.217 96.132 1.00 51.91 O
ATOM 6 C5' A A1859 -3.568 47.142 97.135 1.00 52.35 C
ATOM 7 C4' A A1859 -4.161 48.505 96.899 1.00 52.96 C
ATOM 8 O4' A A1859 -3.724 49.024 95.626 1.00 52.84 O
ATOM 9 C3' A A1859 -5.669 48.564 96.802 1.00 53.28 C
ATOM 10 O3' A A1859 -6.313 48.482 98.071 1.00 53.63 O
ATOM 11 C2' A A1859 -5.899 49.884 96.056 1.00 53.72 C
ATOM 12 O2' A A1859 -5.781 51.014 96.940 1.00 54.30 O
ATOM 13 C1' A A1859 -4.702 49.893 95.103 1.00 53.29 C
ATOM 14 N9 A A1859 -5.041 49.488 93.710 1.00 52.97 N
ATOM 15 C8 A A1859 -4.870 48.314 92.988 1.00 52.37 C
ATOM 16 N7 A A1859 -5.274 48.364 91.734 1.00 52.28 N
ATOM 17 C5 A A1859 -5.726 49.651 91.640 1.00 52.86 C
ATOM 18 C6 A A1859 -6.270 50.342 90.595 1.00 53.11 C
ATOM 19 N6 A A1859 -6.460 49.824 89.405 1.00 52.78 N
ATOM 20 N1 A A1859 -6.612 51.626 90.808 1.00 53.73 N
ATOM 21 C2 A A1859 -6.425 52.188 92.010 1.00 54.09 C
ATOM 22 N3 A A1859 -5.937 51.629 93.096 1.00 53.93 N
ATOM 23 C4 A A1859 -5.594 50.355 92.813 1.00 53.29 C
ATOM 24 P U A1860 -7.781 47.863 98.182 1.00 55.56 P
ATOM 25 OP1 U A1860 -8.084 47.696 99.622 1.00 55.85 O
ATOM 26 OP2 U A1860 -7.822 46.675 97.319 1.00 54.96 O
ATOM 27 O5' U A1860 -8.677 49.028 97.562 1.00 56.10 O
TER
ATOM 1 O3' A B1880 -12.519 55.675 83.731 1.00 63.41 O
ATOM 2 P U B1881 -11.070 56.329 83.480 1.00 66.68 P
ATOM 3 OP1 U B1881 -11.271 57.548 82.672 1.00 67.19 O
ATOM 4 OP2 U B1881 -10.203 55.275 82.937 1.00 65.95 O
ATOM 5 O5' U B1881 -10.614 56.719 84.959 1.00 66.88 O
ATOM 6 C5' U B1881 -11.506 57.376 85.841 1.00 67.49 C
ATOM 7 C4' U B1881 -11.145 57.134 87.286 1.00 67.46 C
ATOM 8 O4' U B1881 -11.246 55.723 87.597 1.00 66.91 O
ATOM 9 C3' U B1881 -9.728 57.494 87.689 1.00 67.32 C
ATOM 10 O3' U B1881 -9.552 58.868 87.929 1.00 67.92 O
ATOM 11 C2' U B1881 -9.490 56.630 88.924 1.00 67.04 C
ATOM 12 O2' U B1881 -10.027 57.239 90.085 1.00 67.59 O
ATOM 13 C1' U B1881 -10.311 55.384 88.600 1.00 66.66 C
ATOM 14 N1 U B1881 -9.469 54.275 88.112 1.00 65.92 N
ATOM 15 C2 U B1881 -8.787 53.554 89.071 1.00 65.57 C
ATOM 16 O2 U B1881 -8.839 53.779 90.268 1.00 65.84 O
ATOM 17 N3 U B1881 -8.051 52.539 88.554 1.00 64.91 N
ATOM 18 C4 U B1881 -7.948 52.190 87.235 1.00 64.58 C
ATOM 19 O4 U B1881 -7.230 51.232 86.968 1.00 63.99 O
ATOM 20 C5 U B1881 -8.658 52.981 86.291 1.00 64.96 C
ATOM 21 C6 U B1881 -9.386 53.979 86.766 1.00 65.61 C
ATOM 22 P U B1882 -8.124 59.537 87.696 1.00 62.11 P
ATOM 23 OP1 U B1882 -8.309 61.013 87.844 1.00 62.85 O
ATOM 24 OP2 U B1882 -7.572 58.992 86.410 1.00 61.57 O
ATOM 25 O5' U B1882 -7.261 58.984 88.904 1.00 61.81 O
TER
Atoms:
OP1: (-2.751,44.120,96.882)
OP2: (-3.488,44.415,94.469)
C3': (-5.669,48.564,96.802)
C1': (-4.702,49.893,95.103)
C5': (-3.568,47.142,97.135)
O4': (-3.724,49.024,95.626)
C8: (-4.870,48.314,92.988)
O2': (-5.781,51.014,96.940)
C6: (-6.270,50.342,90.595)
C5: (-5.726,49.651,91.640)
C4: (-5.594,50.355,92.813)
P: (-3.008,45.010,95.716)
C4': (-4.161,48.505,96.899)
C2': (-5.899,49.884,96.056)
C2: (-6.425,52.188,92.010)
N1: (-6.612,51.626,90.808)
N3: (-5.937,51.629,93.096)
N6: (-6.460,49.824,89.405)
N7: (-5.274,48.364,91.734)
N9: (-5.041,49.488,93.710)
O5': (-3.960,46.217,96.132)
O3': (-6.313,48.482,98.071)
OP2: (-3.488,44.415,94.469)
C3': (-5.669,48.564,96.802)
C1': (-4.702,49.893,95.103)
C5': (-3.568,47.142,97.135)
O4': (-3.724,49.024,95.626)
C8: (-4.870,48.314,92.988)
O2': (-5.781,51.014,96.940)
C6: (-6.270,50.342,90.595)
C5: (-5.726,49.651,91.640)
C4: (-5.594,50.355,92.813)
P: (-3.008,45.010,95.716)
C4': (-4.161,48.505,96.899)
C2': (-5.899,49.884,96.056)
C2: (-6.425,52.188,92.010)
N1: (-6.612,51.626,90.808)
N3: (-5.937,51.629,93.096)
N6: (-6.460,49.824,89.405)
N7: (-5.274,48.364,91.734)
N9: (-5.041,49.488,93.710)
O5': (-3.960,46.217,96.132)
O3': (-6.313,48.482,98.071)
C4: (-7.948,52.190,87.235)
N3: (-8.051,52.539,88.554)
OP1: (-11.271,57.548,82.672)
OP2: (-10.203,55.275,82.937)
C2: (-8.787,53.554,89.071)
C1': (-10.311,55.384,88.600)
C3': (-9.728,57.494,87.689)
O5': (-10.614,56.719,84.959)
O4': (-11.246,55.723,87.597)
C5': (-11.506,57.376,85.841)
P: (-11.070,56.329,83.480)
C4': (-11.145,57.134,87.286)
C2': (-9.490,56.630,88.924)
O2': (-10.027,57.239,90.085)
N1: (-9.469,54.275,88.112)
O4: (-7.230,51.232,86.968)
O2: (-8.839,53.779,90.268)
C6: (-9.386,53.979,86.766)
C5: (-8.658,52.981,86.291)
O3': (-9.552,58.868,87.929)
N3: (-8.051,52.539,88.554)
OP1: (-11.271,57.548,82.672)
OP2: (-10.203,55.275,82.937)
C2: (-8.787,53.554,89.071)
C1': (-10.311,55.384,88.600)
C3': (-9.728,57.494,87.689)
O5': (-10.614,56.719,84.959)
O4': (-11.246,55.723,87.597)
C5': (-11.506,57.376,85.841)
P: (-11.070,56.329,83.480)
C4': (-11.145,57.134,87.286)
C2': (-9.490,56.630,88.924)
O2': (-10.027,57.239,90.085)
N1: (-9.469,54.275,88.112)
O4: (-7.230,51.232,86.968)
O2: (-8.839,53.779,90.268)
C6: (-9.386,53.979,86.766)
C5: (-8.658,52.981,86.291)
O3': (-9.552,58.868,87.929)
Image (generated by PyMOL):