Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01266:01306
Extra
PDB:
ATOM 1 O3' U A1265 25.695 119.029 44.016 1.00 36.07 O
ATOM 2 P A A1266 24.149 119.196 43.634 1.00 37.12 P
ATOM 3 OP1 A A1266 24.116 119.802 42.273 1.00 35.61 O
ATOM 4 OP2 A A1266 23.466 119.883 44.756 1.00 35.07 O
ATOM 5 O5' A A1266 23.632 117.689 43.567 1.00 35.10 O
ATOM 6 C5' A A1266 24.111 116.791 42.544 1.00 37.40 C
ATOM 7 C4' A A1266 23.479 115.427 42.700 1.00 38.92 C
ATOM 8 O4' A A1266 23.915 114.855 43.957 1.00 40.14 O
ATOM 9 C3' A A1266 21.960 115.380 42.775 1.00 39.30 C
ATOM 10 O3' A A1266 21.360 115.406 41.480 1.00 41.50 O
ATOM 11 C2' A A1266 21.725 114.067 43.509 1.00 39.20 C
ATOM 12 O2' A A1266 21.883 112.924 42.686 1.00 39.12 O
ATOM 13 C1' A A1266 22.866 114.096 44.526 1.00 38.86 C
ATOM 14 N9 A A1266 22.494 114.726 45.791 1.00 37.95 N
ATOM 15 C8 A A1266 22.729 116.017 46.194 1.00 38.65 C
ATOM 16 N7 A A1266 22.271 116.289 47.391 1.00 39.15 N
ATOM 17 C5 A A1266 21.696 115.095 47.804 1.00 38.78 C
ATOM 18 C6 A A1266 21.036 114.721 48.985 1.00 38.96 C
ATOM 19 N6 A A1266 20.836 115.548 50.023 1.00 38.88 N
ATOM 20 N1 A A1266 20.582 113.454 49.070 1.00 37.22 N
ATOM 21 C2 A A1266 20.783 112.630 48.038 1.00 35.81 C
ATOM 22 N3 A A1266 21.386 112.861 46.884 1.00 35.53 N
ATOM 23 C4 A A1266 21.826 114.125 46.827 1.00 37.26 C
ATOM 24 P A A1267 19.900 116.058 41.279 1.00 42.86 P
ATOM 25 OP1 A A1267 19.741 116.290 39.825 1.00 45.19 O
ATOM 26 OP2 A A1267 19.721 117.193 42.216 1.00 43.93 O
ATOM 27 O5' A A1267 18.891 114.900 41.710 1.00 43.90 O
TER
ATOM 1 O3' U B1305 14.714 109.524 56.218 1.00 47.83 O
ATOM 2 P U B1306 16.126 108.810 56.444 1.00 49.94 P
ATOM 3 OP1 U B1306 15.889 107.570 57.223 1.00 50.92 O
ATOM 4 OP2 U B1306 17.056 109.845 56.963 1.00 49.96 O
ATOM 5 O5' U B1306 16.595 108.403 54.983 1.00 48.19 O
ATOM 6 C5' U B1306 15.860 107.443 54.229 1.00 47.12 C
ATOM 7 C4' U B1306 16.371 107.399 52.818 1.00 47.90 C
ATOM 8 O4' U B1306 16.152 108.686 52.183 1.00 48.19 O
ATOM 9 C3' U B1306 17.865 107.189 52.682 1.00 47.34 C
ATOM 10 O3' U B1306 18.250 105.838 52.831 1.00 46.19 O
ATOM 11 C2' U B1306 18.142 107.732 51.289 1.00 49.43 C
ATOM 12 O2' U B1306 17.826 106.830 50.245 1.00 49.19 O
ATOM 13 C1' U B1306 17.197 108.936 51.255 1.00 49.59 C
ATOM 14 N1 U B1306 17.868 110.194 51.619 1.00 49.92 N
ATOM 15 C2 U B1306 18.607 110.830 50.635 1.00 51.18 C
ATOM 16 O2 U B1306 18.749 110.374 49.505 1.00 51.40 O
ATOM 17 N3 U B1306 19.184 112.013 51.020 1.00 51.24 N
ATOM 18 C4 U B1306 19.111 112.609 52.255 1.00 49.66 C
ATOM 19 O4 U B1306 19.632 113.713 52.424 1.00 48.50 O
ATOM 20 C5 U B1306 18.351 111.881 53.221 1.00 49.88 C
ATOM 21 C6 U B1306 17.768 110.730 52.879 1.00 48.93 C
ATOM 22 P A B1307 19.692 105.505 53.441 1.00 47.39 P
ATOM 23 OP1 A B1307 19.783 104.041 53.660 1.00 48.11 O
ATOM 24 OP2 A B1307 19.928 106.436 54.573 1.00 46.55 O
ATOM 25 O5' A B1307 20.691 105.884 52.268 1.00 45.47 O
TER
ATOM 2 P A A1266 24.149 119.196 43.634 1.00 37.12 P
ATOM 3 OP1 A A1266 24.116 119.802 42.273 1.00 35.61 O
ATOM 4 OP2 A A1266 23.466 119.883 44.756 1.00 35.07 O
ATOM 5 O5' A A1266 23.632 117.689 43.567 1.00 35.10 O
ATOM 6 C5' A A1266 24.111 116.791 42.544 1.00 37.40 C
ATOM 7 C4' A A1266 23.479 115.427 42.700 1.00 38.92 C
ATOM 8 O4' A A1266 23.915 114.855 43.957 1.00 40.14 O
ATOM 9 C3' A A1266 21.960 115.380 42.775 1.00 39.30 C
ATOM 10 O3' A A1266 21.360 115.406 41.480 1.00 41.50 O
ATOM 11 C2' A A1266 21.725 114.067 43.509 1.00 39.20 C
ATOM 12 O2' A A1266 21.883 112.924 42.686 1.00 39.12 O
ATOM 13 C1' A A1266 22.866 114.096 44.526 1.00 38.86 C
ATOM 14 N9 A A1266 22.494 114.726 45.791 1.00 37.95 N
ATOM 15 C8 A A1266 22.729 116.017 46.194 1.00 38.65 C
ATOM 16 N7 A A1266 22.271 116.289 47.391 1.00 39.15 N
ATOM 17 C5 A A1266 21.696 115.095 47.804 1.00 38.78 C
ATOM 18 C6 A A1266 21.036 114.721 48.985 1.00 38.96 C
ATOM 19 N6 A A1266 20.836 115.548 50.023 1.00 38.88 N
ATOM 20 N1 A A1266 20.582 113.454 49.070 1.00 37.22 N
ATOM 21 C2 A A1266 20.783 112.630 48.038 1.00 35.81 C
ATOM 22 N3 A A1266 21.386 112.861 46.884 1.00 35.53 N
ATOM 23 C4 A A1266 21.826 114.125 46.827 1.00 37.26 C
ATOM 24 P A A1267 19.900 116.058 41.279 1.00 42.86 P
ATOM 25 OP1 A A1267 19.741 116.290 39.825 1.00 45.19 O
ATOM 26 OP2 A A1267 19.721 117.193 42.216 1.00 43.93 O
ATOM 27 O5' A A1267 18.891 114.900 41.710 1.00 43.90 O
TER
ATOM 1 O3' U B1305 14.714 109.524 56.218 1.00 47.83 O
ATOM 2 P U B1306 16.126 108.810 56.444 1.00 49.94 P
ATOM 3 OP1 U B1306 15.889 107.570 57.223 1.00 50.92 O
ATOM 4 OP2 U B1306 17.056 109.845 56.963 1.00 49.96 O
ATOM 5 O5' U B1306 16.595 108.403 54.983 1.00 48.19 O
ATOM 6 C5' U B1306 15.860 107.443 54.229 1.00 47.12 C
ATOM 7 C4' U B1306 16.371 107.399 52.818 1.00 47.90 C
ATOM 8 O4' U B1306 16.152 108.686 52.183 1.00 48.19 O
ATOM 9 C3' U B1306 17.865 107.189 52.682 1.00 47.34 C
ATOM 10 O3' U B1306 18.250 105.838 52.831 1.00 46.19 O
ATOM 11 C2' U B1306 18.142 107.732 51.289 1.00 49.43 C
ATOM 12 O2' U B1306 17.826 106.830 50.245 1.00 49.19 O
ATOM 13 C1' U B1306 17.197 108.936 51.255 1.00 49.59 C
ATOM 14 N1 U B1306 17.868 110.194 51.619 1.00 49.92 N
ATOM 15 C2 U B1306 18.607 110.830 50.635 1.00 51.18 C
ATOM 16 O2 U B1306 18.749 110.374 49.505 1.00 51.40 O
ATOM 17 N3 U B1306 19.184 112.013 51.020 1.00 51.24 N
ATOM 18 C4 U B1306 19.111 112.609 52.255 1.00 49.66 C
ATOM 19 O4 U B1306 19.632 113.713 52.424 1.00 48.50 O
ATOM 20 C5 U B1306 18.351 111.881 53.221 1.00 49.88 C
ATOM 21 C6 U B1306 17.768 110.730 52.879 1.00 48.93 C
ATOM 22 P A B1307 19.692 105.505 53.441 1.00 47.39 P
ATOM 23 OP1 A B1307 19.783 104.041 53.660 1.00 48.11 O
ATOM 24 OP2 A B1307 19.928 106.436 54.573 1.00 46.55 O
ATOM 25 O5' A B1307 20.691 105.884 52.268 1.00 45.47 O
TER
Atoms:
OP1: (24.116,119.802,42.273)
OP2: (23.466,119.883,44.756)
C3': (21.960,115.380,42.775)
C1': (22.866,114.096,44.526)
C5': (24.111,116.791,42.544)
O4': (23.915,114.855,43.957)
C8: (22.729,116.017,46.194)
O2': (21.883,112.924,42.686)
C6: (21.036,114.721,48.985)
C5: (21.696,115.095,47.804)
C4: (21.826,114.125,46.827)
P: (24.149,119.196,43.634)
C4': (23.479,115.427,42.700)
C2': (21.725,114.067,43.509)
C2: (20.783,112.630,48.038)
N1: (20.582,113.454,49.070)
N3: (21.386,112.861,46.884)
N6: (20.836,115.548,50.023)
N7: (22.271,116.289,47.391)
N9: (22.494,114.726,45.791)
O5': (23.632,117.689,43.567)
O3': (21.360,115.406,41.480)
OP2: (23.466,119.883,44.756)
C3': (21.960,115.380,42.775)
C1': (22.866,114.096,44.526)
C5': (24.111,116.791,42.544)
O4': (23.915,114.855,43.957)
C8: (22.729,116.017,46.194)
O2': (21.883,112.924,42.686)
C6: (21.036,114.721,48.985)
C5: (21.696,115.095,47.804)
C4: (21.826,114.125,46.827)
P: (24.149,119.196,43.634)
C4': (23.479,115.427,42.700)
C2': (21.725,114.067,43.509)
C2: (20.783,112.630,48.038)
N1: (20.582,113.454,49.070)
N3: (21.386,112.861,46.884)
N6: (20.836,115.548,50.023)
N7: (22.271,116.289,47.391)
N9: (22.494,114.726,45.791)
O5': (23.632,117.689,43.567)
O3': (21.360,115.406,41.480)
C4: (19.111,112.609,52.255)
N3: (19.184,112.013,51.020)
OP1: (15.889,107.570,57.223)
OP2: (17.056,109.845,56.963)
C2: (18.607,110.830,50.635)
C1': (17.197,108.936,51.255)
C3': (17.865,107.189,52.682)
O5': (16.595,108.403,54.983)
O4': (16.152,108.686,52.183)
C5': (15.860,107.443,54.229)
P: (16.126,108.810,56.444)
C4': (16.371,107.399,52.818)
C2': (18.142,107.732,51.289)
O2': (17.826,106.830,50.245)
N1: (17.868,110.194,51.619)
O4: (19.632,113.713,52.424)
O2: (18.749,110.374,49.505)
C6: (17.768,110.730,52.879)
C5: (18.351,111.881,53.221)
O3': (18.250,105.838,52.831)
N3: (19.184,112.013,51.020)
OP1: (15.889,107.570,57.223)
OP2: (17.056,109.845,56.963)
C2: (18.607,110.830,50.635)
C1': (17.197,108.936,51.255)
C3': (17.865,107.189,52.682)
O5': (16.595,108.403,54.983)
O4': (16.152,108.686,52.183)
C5': (15.860,107.443,54.229)
P: (16.126,108.810,56.444)
C4': (16.371,107.399,52.818)
C2': (18.142,107.732,51.289)
O2': (17.826,106.830,50.245)
N1: (17.868,110.194,51.619)
O4: (19.632,113.713,52.424)
O2: (18.749,110.374,49.505)
C6: (17.768,110.730,52.879)
C5: (18.351,111.881,53.221)
O3': (18.250,105.838,52.831)
Image (generated by PyMOL):