Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12026:12033
Extra
PDB:
ATOM 1 O3' G A2025 10.607 -63.461 114.853 1.00 71.36 O
ATOM 2 P A A2026 11.698 -64.619 114.681 1.00 70.63 P
ATOM 3 OP1 A A2026 11.105 -65.864 115.232 1.00 71.24 O
ATOM 4 OP2 A A2026 12.951 -64.121 115.280 1.00 70.53 O
ATOM 5 O5' A A2026 11.848 -64.755 113.102 1.00 70.25 O
ATOM 6 C5' A A2026 10.990 -65.624 112.383 1.00 70.42 C
ATOM 7 C4' A A2026 11.374 -65.719 110.933 1.00 70.06 C
ATOM 8 O4' A A2026 11.453 -64.390 110.360 1.00 69.48 O
ATOM 9 C3' A A2026 12.733 -66.337 110.629 1.00 70.07 C
ATOM 10 O3' A A2026 12.716 -67.759 110.660 1.00 70.57 O
ATOM 11 C2' A A2026 13.046 -65.763 109.253 1.00 69.53 C
ATOM 12 O2' A A2026 12.325 -66.454 108.245 1.00 69.58 O
ATOM 13 C1' A A2026 12.463 -64.352 109.374 1.00 69.14 C
ATOM 14 N9 A A2026 13.483 -63.346 109.767 1.00 68.83 N
ATOM 15 C8 A A2026 13.722 -62.774 110.998 1.00 68.93 C
ATOM 16 N7 A A2026 14.717 -61.910 110.997 1.00 68.58 N
ATOM 17 C5 A A2026 15.166 -61.902 109.684 1.00 68.23 C
ATOM 18 C6 A A2026 16.181 -61.190 109.013 1.00 67.77 C
ATOM 19 N6 A A2026 16.991 -60.307 109.592 1.00 67.59 N
ATOM 20 N1 A A2026 16.359 -61.402 107.699 1.00 67.52 N
ATOM 21 C2 A A2026 15.561 -62.277 107.106 1.00 67.71 C
ATOM 22 N3 A A2026 14.574 -63.012 107.612 1.00 68.13 N
ATOM 23 C4 A A2026 14.416 -62.775 108.924 1.00 68.37 C
ATOM 24 P A A2027 13.927 -68.588 111.337 1.00 67.66 P
ATOM 25 OP1 A A2027 13.394 -69.924 111.714 1.00 68.27 O
ATOM 26 OP2 A A2027 14.498 -67.735 112.402 1.00 67.59 O
ATOM 27 O5' A A2027 14.963 -68.745 110.126 1.00 67.34 O
TER
ATOM 1 O3' U B2032 23.868 -56.962 103.040 1.00 61.40 O
ATOM 2 P U B2033 22.450 -56.312 102.614 1.00 66.20 P
ATOM 3 OP1 U B2033 22.651 -55.614 101.348 1.00 65.74 O
ATOM 4 OP2 U B2033 21.944 -55.544 103.772 1.00 66.25 O
ATOM 5 O5' U B2033 21.552 -57.576 102.353 1.00 66.55 O
ATOM 6 C5' U B2033 21.580 -58.212 101.089 1.00 66.48 C
ATOM 7 C4' U B2033 20.533 -59.283 101.001 1.00 66.84 C
ATOM 8 O4' U B2033 20.717 -60.215 102.100 1.00 67.32 O
ATOM 9 C3' U B2033 19.102 -58.809 101.165 1.00 66.81 C
ATOM 10 O3' U B2033 18.532 -58.282 99.971 1.00 66.47 O
ATOM 11 C2' U B2033 18.418 -60.056 101.653 1.00 67.32 C
ATOM 12 O2' U B2033 18.274 -60.957 100.573 1.00 67.40 O
ATOM 13 C1' U B2033 19.469 -60.611 102.598 1.00 67.61 C
ATOM 14 N1 U B2033 19.333 -60.091 103.977 1.00 67.74 N
ATOM 15 C2 U B2033 18.376 -60.622 104.812 1.00 68.14 C
ATOM 16 O2 U B2033 17.604 -61.472 104.416 1.00 68.37 O
ATOM 17 N3 U B2033 18.316 -60.128 106.101 1.00 68.27 N
ATOM 18 C4 U B2033 19.121 -59.174 106.663 1.00 68.07 C
ATOM 19 O4 U B2033 18.970 -58.818 107.841 1.00 68.24 O
ATOM 20 C5 U B2033 20.099 -58.689 105.741 1.00 67.66 C
ATOM 21 C6 U B2033 20.178 -59.143 104.479 1.00 67.52 C
ATOM 22 P C B2034 17.326 -57.199 100.067 1.00 66.20 P
ATOM 23 OP1 C B2034 17.028 -56.733 98.677 1.00 65.84 O
ATOM 24 OP2 C B2034 17.705 -56.182 101.114 1.00 66.09 O
ATOM 25 O5' C B2034 16.130 -58.087 100.600 1.00 66.65 O
TER
ATOM 2 P A A2026 11.698 -64.619 114.681 1.00 70.63 P
ATOM 3 OP1 A A2026 11.105 -65.864 115.232 1.00 71.24 O
ATOM 4 OP2 A A2026 12.951 -64.121 115.280 1.00 70.53 O
ATOM 5 O5' A A2026 11.848 -64.755 113.102 1.00 70.25 O
ATOM 6 C5' A A2026 10.990 -65.624 112.383 1.00 70.42 C
ATOM 7 C4' A A2026 11.374 -65.719 110.933 1.00 70.06 C
ATOM 8 O4' A A2026 11.453 -64.390 110.360 1.00 69.48 O
ATOM 9 C3' A A2026 12.733 -66.337 110.629 1.00 70.07 C
ATOM 10 O3' A A2026 12.716 -67.759 110.660 1.00 70.57 O
ATOM 11 C2' A A2026 13.046 -65.763 109.253 1.00 69.53 C
ATOM 12 O2' A A2026 12.325 -66.454 108.245 1.00 69.58 O
ATOM 13 C1' A A2026 12.463 -64.352 109.374 1.00 69.14 C
ATOM 14 N9 A A2026 13.483 -63.346 109.767 1.00 68.83 N
ATOM 15 C8 A A2026 13.722 -62.774 110.998 1.00 68.93 C
ATOM 16 N7 A A2026 14.717 -61.910 110.997 1.00 68.58 N
ATOM 17 C5 A A2026 15.166 -61.902 109.684 1.00 68.23 C
ATOM 18 C6 A A2026 16.181 -61.190 109.013 1.00 67.77 C
ATOM 19 N6 A A2026 16.991 -60.307 109.592 1.00 67.59 N
ATOM 20 N1 A A2026 16.359 -61.402 107.699 1.00 67.52 N
ATOM 21 C2 A A2026 15.561 -62.277 107.106 1.00 67.71 C
ATOM 22 N3 A A2026 14.574 -63.012 107.612 1.00 68.13 N
ATOM 23 C4 A A2026 14.416 -62.775 108.924 1.00 68.37 C
ATOM 24 P A A2027 13.927 -68.588 111.337 1.00 67.66 P
ATOM 25 OP1 A A2027 13.394 -69.924 111.714 1.00 68.27 O
ATOM 26 OP2 A A2027 14.498 -67.735 112.402 1.00 67.59 O
ATOM 27 O5' A A2027 14.963 -68.745 110.126 1.00 67.34 O
TER
ATOM 1 O3' U B2032 23.868 -56.962 103.040 1.00 61.40 O
ATOM 2 P U B2033 22.450 -56.312 102.614 1.00 66.20 P
ATOM 3 OP1 U B2033 22.651 -55.614 101.348 1.00 65.74 O
ATOM 4 OP2 U B2033 21.944 -55.544 103.772 1.00 66.25 O
ATOM 5 O5' U B2033 21.552 -57.576 102.353 1.00 66.55 O
ATOM 6 C5' U B2033 21.580 -58.212 101.089 1.00 66.48 C
ATOM 7 C4' U B2033 20.533 -59.283 101.001 1.00 66.84 C
ATOM 8 O4' U B2033 20.717 -60.215 102.100 1.00 67.32 O
ATOM 9 C3' U B2033 19.102 -58.809 101.165 1.00 66.81 C
ATOM 10 O3' U B2033 18.532 -58.282 99.971 1.00 66.47 O
ATOM 11 C2' U B2033 18.418 -60.056 101.653 1.00 67.32 C
ATOM 12 O2' U B2033 18.274 -60.957 100.573 1.00 67.40 O
ATOM 13 C1' U B2033 19.469 -60.611 102.598 1.00 67.61 C
ATOM 14 N1 U B2033 19.333 -60.091 103.977 1.00 67.74 N
ATOM 15 C2 U B2033 18.376 -60.622 104.812 1.00 68.14 C
ATOM 16 O2 U B2033 17.604 -61.472 104.416 1.00 68.37 O
ATOM 17 N3 U B2033 18.316 -60.128 106.101 1.00 68.27 N
ATOM 18 C4 U B2033 19.121 -59.174 106.663 1.00 68.07 C
ATOM 19 O4 U B2033 18.970 -58.818 107.841 1.00 68.24 O
ATOM 20 C5 U B2033 20.099 -58.689 105.741 1.00 67.66 C
ATOM 21 C6 U B2033 20.178 -59.143 104.479 1.00 67.52 C
ATOM 22 P C B2034 17.326 -57.199 100.067 1.00 66.20 P
ATOM 23 OP1 C B2034 17.028 -56.733 98.677 1.00 65.84 O
ATOM 24 OP2 C B2034 17.705 -56.182 101.114 1.00 66.09 O
ATOM 25 O5' C B2034 16.130 -58.087 100.600 1.00 66.65 O
TER
Atoms:
OP1: (11.105,-65.864,115.232)
OP2: (12.951,-64.121,115.280)
C3': (12.733,-66.337,110.629)
C1': (12.463,-64.352,109.374)
C5': (10.990,-65.624,112.383)
O4': (11.453,-64.390,110.360)
C8: (13.722,-62.774,110.998)
O2': (12.325,-66.454,108.245)
C6: (16.181,-61.190,109.013)
C5: (15.166,-61.902,109.684)
C4: (14.416,-62.775,108.924)
P: (11.698,-64.619,114.681)
C4': (11.374,-65.719,110.933)
C2': (13.046,-65.763,109.253)
C2: (15.561,-62.277,107.106)
N1: (16.359,-61.402,107.699)
N3: (14.574,-63.012,107.612)
N6: (16.991,-60.307,109.592)
N7: (14.717,-61.910,110.997)
N9: (13.483,-63.346,109.767)
O5': (11.848,-64.755,113.102)
O3': (12.716,-67.759,110.660)
OP2: (12.951,-64.121,115.280)
C3': (12.733,-66.337,110.629)
C1': (12.463,-64.352,109.374)
C5': (10.990,-65.624,112.383)
O4': (11.453,-64.390,110.360)
C8: (13.722,-62.774,110.998)
O2': (12.325,-66.454,108.245)
C6: (16.181,-61.190,109.013)
C5: (15.166,-61.902,109.684)
C4: (14.416,-62.775,108.924)
P: (11.698,-64.619,114.681)
C4': (11.374,-65.719,110.933)
C2': (13.046,-65.763,109.253)
C2: (15.561,-62.277,107.106)
N1: (16.359,-61.402,107.699)
N3: (14.574,-63.012,107.612)
N6: (16.991,-60.307,109.592)
N7: (14.717,-61.910,110.997)
N9: (13.483,-63.346,109.767)
O5': (11.848,-64.755,113.102)
O3': (12.716,-67.759,110.660)
C4: (19.121,-59.174,106.663)
N3: (18.316,-60.128,106.101)
OP1: (22.651,-55.614,101.348)
OP2: (21.944,-55.544,103.772)
C2: (18.376,-60.622,104.812)
C1': (19.469,-60.611,102.598)
C3': (19.102,-58.809,101.165)
O5': (21.552,-57.576,102.353)
O4': (20.717,-60.215,102.100)
C5': (21.580,-58.212,101.089)
P: (22.450,-56.312,102.614)
C4': (20.533,-59.283,101.001)
C2': (18.418,-60.056,101.653)
O2': (18.274,-60.957,100.573)
N1: (19.333,-60.091,103.977)
O4: (18.970,-58.818,107.841)
O2: (17.604,-61.472,104.416)
C6: (20.178,-59.143,104.479)
C5: (20.099,-58.689,105.741)
O3': (18.532,-58.282,99.971)
N3: (18.316,-60.128,106.101)
OP1: (22.651,-55.614,101.348)
OP2: (21.944,-55.544,103.772)
C2: (18.376,-60.622,104.812)
C1': (19.469,-60.611,102.598)
C3': (19.102,-58.809,101.165)
O5': (21.552,-57.576,102.353)
O4': (20.717,-60.215,102.100)
C5': (21.580,-58.212,101.089)
P: (22.450,-56.312,102.614)
C4': (20.533,-59.283,101.001)
C2': (18.418,-60.056,101.653)
O2': (18.274,-60.957,100.573)
N1: (19.333,-60.091,103.977)
O4: (18.970,-58.818,107.841)
O2: (17.604,-61.472,104.416)
C6: (20.178,-59.143,104.479)
C5: (20.099,-58.689,105.741)
O3': (18.532,-58.282,99.971)
Image (generated by PyMOL):