Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A129:A213
Extra
PDB:
ATOM 1 O3' G A 128 86.703 67.771 -2.069 1.00 67.78 O
ATOM 2 P A A 129 85.918 66.394 -1.765 1.00 74.34 P
ATOM 3 OP1 A A 129 84.494 66.758 -1.524 1.00 55.13 O
ATOM 4 OP2 A A 129 86.657 65.627 -0.725 1.00 55.13 O
ATOM 5 O5' A A 129 86.024 65.585 -3.139 1.00 74.34 O
ATOM 6 C5' A A 129 85.444 66.116 -4.344 1.00 74.34 C
ATOM 7 C4' A A 129 85.591 65.143 -5.490 1.00 74.34 C
ATOM 8 O4' A A 129 86.970 65.086 -5.943 1.00 74.34 O
ATOM 9 C3' A A 129 85.228 63.696 -5.222 1.00 74.34 C
ATOM 10 O3' A A 129 83.829 63.467 -5.249 1.00 74.34 O
ATOM 11 C2' A A 129 85.976 62.962 -6.331 1.00 74.34 C
ATOM 12 O2' A A 129 85.310 62.980 -7.578 1.00 74.34 O
ATOM 13 C1' A A 129 87.257 63.788 -6.440 1.00 74.34 C
ATOM 14 N9 A A 129 88.319 63.205 -5.624 1.00 55.13 N
ATOM 15 C8 A A 129 88.748 63.602 -4.379 1.00 55.13 C
ATOM 16 N7 A A 129 89.692 62.844 -3.877 1.00 55.13 N
ATOM 17 C5 A A 129 89.910 61.891 -4.862 1.00 55.13 C
ATOM 18 C6 A A 129 90.790 60.800 -4.938 1.00 55.13 C
ATOM 19 N6 A A 129 91.641 60.470 -3.962 1.00 55.13 N
ATOM 20 N1 A A 129 90.764 60.050 -6.060 1.00 55.13 N
ATOM 21 C2 A A 129 89.902 60.383 -7.029 1.00 55.13 C
ATOM 22 N3 A A 129 89.020 61.383 -7.073 1.00 55.13 N
ATOM 23 C4 A A 129 89.077 62.107 -5.947 1.00 55.13 C
ATOM 24 P A A 130 83.199 62.330 -4.299 1.00 80.48 P
ATOM 25 OP1 A A 130 81.726 62.405 -4.486 1.00 49.74 O
ATOM 26 OP2 A A 130 83.764 62.427 -2.924 1.00 49.74 O
ATOM 27 O5' A A 130 83.750 60.972 -4.931 1.00 80.48 O
TER
ATOM 1 O3' U B 212 96.960 52.255 -7.588 1.00 49.39 O
ATOM 2 P U B 213 97.823 53.453 -8.238 1.00 54.61 P
ATOM 3 OP1 U B 213 98.762 52.821 -9.213 1.00 47.62 O
ATOM 4 OP2 U B 213 98.364 54.325 -7.164 1.00 47.62 O
ATOM 5 O5' U B 213 96.732 54.265 -9.058 1.00 54.61 O
ATOM 6 C5' U B 213 95.972 53.601 -10.063 1.00 54.61 C
ATOM 7 C4' U B 213 94.864 54.484 -10.556 1.00 54.61 C
ATOM 8 O4' U B 213 93.775 54.518 -9.604 1.00 54.61 O
ATOM 9 C3' U B 213 95.205 55.942 -10.775 1.00 54.61 C
ATOM 10 O3' U B 213 95.919 56.159 -11.980 1.00 54.61 O
ATOM 11 C2' U B 213 93.826 56.586 -10.755 1.00 54.61 C
ATOM 12 O2' U B 213 93.138 56.380 -11.976 1.00 54.61 O
ATOM 13 C1' U B 213 93.136 55.783 -9.653 1.00 54.61 C
ATOM 14 N1 U B 213 93.286 56.423 -8.337 1.00 47.62 N
ATOM 15 C2 U B 213 92.345 57.364 -7.955 1.00 47.62 C
ATOM 16 O2 U B 213 91.385 57.666 -8.648 1.00 47.62 O
ATOM 17 N3 U B 213 92.575 57.946 -6.733 1.00 47.62 N
ATOM 18 C4 U B 213 93.626 57.689 -5.878 1.00 47.62 C
ATOM 19 O4 U B 213 93.712 58.301 -4.809 1.00 47.62 O
ATOM 20 C5 U B 213 94.539 56.698 -6.344 1.00 47.62 C
ATOM 21 C6 U B 213 94.339 56.112 -7.521 1.00 47.62 C
ATOM 22 P C B 214 97.014 57.335 -12.042 1.00 56.43 P
ATOM 23 OP1 C B 214 97.688 57.134 -13.350 1.00 43.29 O
ATOM 24 OP2 C B 214 97.823 57.373 -10.795 1.00 43.29 O
ATOM 25 O5' C B 214 96.126 58.658 -12.065 1.00 56.43 O
TER
ATOM 2 P A A 129 85.918 66.394 -1.765 1.00 74.34 P
ATOM 3 OP1 A A 129 84.494 66.758 -1.524 1.00 55.13 O
ATOM 4 OP2 A A 129 86.657 65.627 -0.725 1.00 55.13 O
ATOM 5 O5' A A 129 86.024 65.585 -3.139 1.00 74.34 O
ATOM 6 C5' A A 129 85.444 66.116 -4.344 1.00 74.34 C
ATOM 7 C4' A A 129 85.591 65.143 -5.490 1.00 74.34 C
ATOM 8 O4' A A 129 86.970 65.086 -5.943 1.00 74.34 O
ATOM 9 C3' A A 129 85.228 63.696 -5.222 1.00 74.34 C
ATOM 10 O3' A A 129 83.829 63.467 -5.249 1.00 74.34 O
ATOM 11 C2' A A 129 85.976 62.962 -6.331 1.00 74.34 C
ATOM 12 O2' A A 129 85.310 62.980 -7.578 1.00 74.34 O
ATOM 13 C1' A A 129 87.257 63.788 -6.440 1.00 74.34 C
ATOM 14 N9 A A 129 88.319 63.205 -5.624 1.00 55.13 N
ATOM 15 C8 A A 129 88.748 63.602 -4.379 1.00 55.13 C
ATOM 16 N7 A A 129 89.692 62.844 -3.877 1.00 55.13 N
ATOM 17 C5 A A 129 89.910 61.891 -4.862 1.00 55.13 C
ATOM 18 C6 A A 129 90.790 60.800 -4.938 1.00 55.13 C
ATOM 19 N6 A A 129 91.641 60.470 -3.962 1.00 55.13 N
ATOM 20 N1 A A 129 90.764 60.050 -6.060 1.00 55.13 N
ATOM 21 C2 A A 129 89.902 60.383 -7.029 1.00 55.13 C
ATOM 22 N3 A A 129 89.020 61.383 -7.073 1.00 55.13 N
ATOM 23 C4 A A 129 89.077 62.107 -5.947 1.00 55.13 C
ATOM 24 P A A 130 83.199 62.330 -4.299 1.00 80.48 P
ATOM 25 OP1 A A 130 81.726 62.405 -4.486 1.00 49.74 O
ATOM 26 OP2 A A 130 83.764 62.427 -2.924 1.00 49.74 O
ATOM 27 O5' A A 130 83.750 60.972 -4.931 1.00 80.48 O
TER
ATOM 1 O3' U B 212 96.960 52.255 -7.588 1.00 49.39 O
ATOM 2 P U B 213 97.823 53.453 -8.238 1.00 54.61 P
ATOM 3 OP1 U B 213 98.762 52.821 -9.213 1.00 47.62 O
ATOM 4 OP2 U B 213 98.364 54.325 -7.164 1.00 47.62 O
ATOM 5 O5' U B 213 96.732 54.265 -9.058 1.00 54.61 O
ATOM 6 C5' U B 213 95.972 53.601 -10.063 1.00 54.61 C
ATOM 7 C4' U B 213 94.864 54.484 -10.556 1.00 54.61 C
ATOM 8 O4' U B 213 93.775 54.518 -9.604 1.00 54.61 O
ATOM 9 C3' U B 213 95.205 55.942 -10.775 1.00 54.61 C
ATOM 10 O3' U B 213 95.919 56.159 -11.980 1.00 54.61 O
ATOM 11 C2' U B 213 93.826 56.586 -10.755 1.00 54.61 C
ATOM 12 O2' U B 213 93.138 56.380 -11.976 1.00 54.61 O
ATOM 13 C1' U B 213 93.136 55.783 -9.653 1.00 54.61 C
ATOM 14 N1 U B 213 93.286 56.423 -8.337 1.00 47.62 N
ATOM 15 C2 U B 213 92.345 57.364 -7.955 1.00 47.62 C
ATOM 16 O2 U B 213 91.385 57.666 -8.648 1.00 47.62 O
ATOM 17 N3 U B 213 92.575 57.946 -6.733 1.00 47.62 N
ATOM 18 C4 U B 213 93.626 57.689 -5.878 1.00 47.62 C
ATOM 19 O4 U B 213 93.712 58.301 -4.809 1.00 47.62 O
ATOM 20 C5 U B 213 94.539 56.698 -6.344 1.00 47.62 C
ATOM 21 C6 U B 213 94.339 56.112 -7.521 1.00 47.62 C
ATOM 22 P C B 214 97.014 57.335 -12.042 1.00 56.43 P
ATOM 23 OP1 C B 214 97.688 57.134 -13.350 1.00 43.29 O
ATOM 24 OP2 C B 214 97.823 57.373 -10.795 1.00 43.29 O
ATOM 25 O5' C B 214 96.126 58.658 -12.065 1.00 56.43 O
TER
Atoms:
OP1: (84.494,66.758,-1.524)
OP2: (86.657,65.627,-0.725)
C3': (85.228,63.696,-5.222)
C1': (87.257,63.788,-6.440)
C5': (85.444,66.116,-4.344)
O4': (86.970,65.086,-5.943)
C8: (88.748,63.602,-4.379)
O2': (85.310,62.980,-7.578)
C6: (90.790,60.800,-4.938)
C5: (89.910,61.891,-4.862)
C4: (89.077,62.107,-5.947)
P: (85.918,66.394,-1.765)
C4': (85.591,65.143,-5.490)
C2': (85.976,62.962,-6.331)
C2: (89.902,60.383,-7.029)
N1: (90.764,60.050,-6.060)
N3: (89.020,61.383,-7.073)
N6: (91.641,60.470,-3.962)
N7: (89.692,62.844,-3.877)
N9: (88.319,63.205,-5.624)
O5': (86.024,65.585,-3.139)
O3': (83.829,63.467,-5.249)
OP2: (86.657,65.627,-0.725)
C3': (85.228,63.696,-5.222)
C1': (87.257,63.788,-6.440)
C5': (85.444,66.116,-4.344)
O4': (86.970,65.086,-5.943)
C8: (88.748,63.602,-4.379)
O2': (85.310,62.980,-7.578)
C6: (90.790,60.800,-4.938)
C5: (89.910,61.891,-4.862)
C4: (89.077,62.107,-5.947)
P: (85.918,66.394,-1.765)
C4': (85.591,65.143,-5.490)
C2': (85.976,62.962,-6.331)
C2: (89.902,60.383,-7.029)
N1: (90.764,60.050,-6.060)
N3: (89.020,61.383,-7.073)
N6: (91.641,60.470,-3.962)
N7: (89.692,62.844,-3.877)
N9: (88.319,63.205,-5.624)
O5': (86.024,65.585,-3.139)
O3': (83.829,63.467,-5.249)
C4: (93.626,57.689,-5.878)
N3: (92.575,57.946,-6.733)
OP1: (98.762,52.821,-9.213)
OP2: (98.364,54.325,-7.164)
C2: (92.345,57.364,-7.955)
C1': (93.136,55.783,-9.653)
C3': (95.205,55.942,-10.775)
O5': (96.732,54.265,-9.058)
O4': (93.775,54.518,-9.604)
C5': (95.972,53.601,-10.063)
P: (97.823,53.453,-8.238)
C4': (94.864,54.484,-10.556)
C2': (93.826,56.586,-10.755)
O2': (93.138,56.380,-11.976)
N1: (93.286,56.423,-8.337)
O4: (93.712,58.301,-4.809)
O2: (91.385,57.666,-8.648)
C6: (94.339,56.112,-7.521)
C5: (94.539,56.698,-6.344)
O3': (95.919,56.159,-11.980)
N3: (92.575,57.946,-6.733)
OP1: (98.762,52.821,-9.213)
OP2: (98.364,54.325,-7.164)
C2: (92.345,57.364,-7.955)
C1': (93.136,55.783,-9.653)
C3': (95.205,55.942,-10.775)
O5': (96.732,54.265,-9.058)
O4': (93.775,54.518,-9.604)
C5': (95.972,53.601,-10.063)
P: (97.823,53.453,-8.238)
C4': (94.864,54.484,-10.556)
C2': (93.826,56.586,-10.755)
O2': (93.138,56.380,-11.976)
N1: (93.286,56.423,-8.337)
O4: (93.712,58.301,-4.809)
O2: (91.385,57.666,-8.648)
C6: (94.339,56.112,-7.521)
C5: (94.539,56.698,-6.344)
O3': (95.919,56.159,-11.980)
Image (generated by PyMOL):