Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0590:0543
Extra
PDB:
ATOM 1 O3' G A 589 -13.366 127.156 96.174 1.00 65.49 O
ATOM 2 P A A 590 -12.829 128.159 95.034 1.00 66.88 P
ATOM 3 OP1 A A 590 -12.913 129.541 95.589 1.00 65.62 O
ATOM 4 OP2 A A 590 -13.511 127.837 93.752 1.00 64.11 O
ATOM 5 O5' A A 590 -11.287 127.781 94.877 1.00 66.48 O
ATOM 6 C5' A A 590 -10.333 128.122 95.905 1.00 65.91 C
ATOM 7 C4' A A 590 -8.922 127.870 95.422 1.00 65.51 C
ATOM 8 O4' A A 590 -8.777 126.461 95.091 1.00 64.46 O
ATOM 9 C3' A A 590 -8.491 128.590 94.149 1.00 66.14 C
ATOM 10 O3' A A 590 -8.059 129.929 94.405 1.00 68.31 O
ATOM 11 C2' A A 590 -7.338 127.714 93.678 1.00 64.14 C
ATOM 12 O2' A A 590 -6.171 127.948 94.440 1.00 63.92 O
ATOM 13 C1' A A 590 -7.864 126.315 94.013 1.00 62.23 C
ATOM 14 N9 A A 590 -8.560 125.666 92.900 1.00 59.25 N
ATOM 15 C8 A A 590 -9.911 125.634 92.667 1.00 58.36 C
ATOM 16 N7 A A 590 -10.247 124.966 91.593 1.00 56.94 N
ATOM 17 C5 A A 590 -9.038 124.529 91.078 1.00 57.19 C
ATOM 18 C6 A A 590 -8.718 123.767 89.942 1.00 56.83 C
ATOM 19 N6 A A 590 -9.629 123.295 89.090 1.00 55.09 N
ATOM 20 N1 A A 590 -7.413 123.506 89.707 1.00 57.07 N
ATOM 21 C2 A A 590 -6.500 123.989 90.561 1.00 57.60 C
ATOM 22 N3 A A 590 -6.677 124.719 91.663 1.00 58.46 N
ATOM 23 C4 A A 590 -7.987 124.956 91.870 1.00 58.70 C
ATOM 24 P A A 591 -8.458 131.111 93.382 1.00 69.99 P
ATOM 25 OP1 A A 591 -8.026 132.399 93.995 1.00 70.62 O
ATOM 26 OP2 A A 591 -9.880 130.923 92.997 1.00 69.97 O
ATOM 27 O5' A A 591 -7.581 130.847 92.075 1.00 70.81 O
TER
ATOM 1 O3' G B 542 -4.707 119.406 82.199 1.00 44.47 O
ATOM 2 P U B 543 -4.767 117.798 82.089 1.00 48.89 P
ATOM 3 OP1 U B 543 -4.462 117.402 80.678 1.00 47.82 O
ATOM 4 OP2 U B 543 -6.047 117.349 82.715 1.00 49.93 O
ATOM 5 O5' U B 543 -3.540 117.327 82.995 1.00 46.82 O
ATOM 6 C5' U B 543 -3.710 117.054 84.396 1.00 45.85 C
ATOM 7 C4' U B 543 -2.946 118.055 85.235 1.00 45.35 C
ATOM 8 O4' U B 543 -3.451 119.392 84.980 1.00 46.18 O
ATOM 9 C3' U B 543 -3.157 117.870 86.726 1.00 46.42 C
ATOM 10 O3' U B 543 -2.292 116.883 87.257 1.00 46.20 O
ATOM 11 C2' U B 543 -2.892 119.257 87.284 1.00 46.39 C
ATOM 12 O2' U B 543 -1.519 119.556 87.418 1.00 48.48 O
ATOM 13 C1' U B 543 -3.507 120.132 86.193 1.00 46.31 C
ATOM 14 N1 U B 543 -4.912 120.492 86.460 1.00 47.69 N
ATOM 15 C2 U B 543 -5.174 121.386 87.495 1.00 48.27 C
ATOM 16 O2 U B 543 -4.304 121.852 88.211 1.00 47.92 O
ATOM 17 N3 U B 543 -6.501 121.706 87.662 1.00 48.64 N
ATOM 18 C4 U B 543 -7.572 121.231 86.932 1.00 48.36 C
ATOM 19 O4 U B 543 -8.706 121.642 87.184 1.00 47.74 O
ATOM 20 C5 U B 543 -7.227 120.299 85.904 1.00 47.84 C
ATOM 21 C6 U B 543 -5.944 119.970 85.706 1.00 47.90 C
ATOM 22 P C B 544 -2.783 115.982 88.486 1.00 44.46 P
ATOM 23 OP1 C B 544 -1.652 115.073 88.796 1.00 46.59 O
ATOM 24 OP2 C B 544 -4.124 115.418 88.194 1.00 44.43 O
ATOM 25 O5' C B 544 -2.927 117.026 89.675 1.00 45.58 O
TER
ATOM 2 P A A 590 -12.829 128.159 95.034 1.00 66.88 P
ATOM 3 OP1 A A 590 -12.913 129.541 95.589 1.00 65.62 O
ATOM 4 OP2 A A 590 -13.511 127.837 93.752 1.00 64.11 O
ATOM 5 O5' A A 590 -11.287 127.781 94.877 1.00 66.48 O
ATOM 6 C5' A A 590 -10.333 128.122 95.905 1.00 65.91 C
ATOM 7 C4' A A 590 -8.922 127.870 95.422 1.00 65.51 C
ATOM 8 O4' A A 590 -8.777 126.461 95.091 1.00 64.46 O
ATOM 9 C3' A A 590 -8.491 128.590 94.149 1.00 66.14 C
ATOM 10 O3' A A 590 -8.059 129.929 94.405 1.00 68.31 O
ATOM 11 C2' A A 590 -7.338 127.714 93.678 1.00 64.14 C
ATOM 12 O2' A A 590 -6.171 127.948 94.440 1.00 63.92 O
ATOM 13 C1' A A 590 -7.864 126.315 94.013 1.00 62.23 C
ATOM 14 N9 A A 590 -8.560 125.666 92.900 1.00 59.25 N
ATOM 15 C8 A A 590 -9.911 125.634 92.667 1.00 58.36 C
ATOM 16 N7 A A 590 -10.247 124.966 91.593 1.00 56.94 N
ATOM 17 C5 A A 590 -9.038 124.529 91.078 1.00 57.19 C
ATOM 18 C6 A A 590 -8.718 123.767 89.942 1.00 56.83 C
ATOM 19 N6 A A 590 -9.629 123.295 89.090 1.00 55.09 N
ATOM 20 N1 A A 590 -7.413 123.506 89.707 1.00 57.07 N
ATOM 21 C2 A A 590 -6.500 123.989 90.561 1.00 57.60 C
ATOM 22 N3 A A 590 -6.677 124.719 91.663 1.00 58.46 N
ATOM 23 C4 A A 590 -7.987 124.956 91.870 1.00 58.70 C
ATOM 24 P A A 591 -8.458 131.111 93.382 1.00 69.99 P
ATOM 25 OP1 A A 591 -8.026 132.399 93.995 1.00 70.62 O
ATOM 26 OP2 A A 591 -9.880 130.923 92.997 1.00 69.97 O
ATOM 27 O5' A A 591 -7.581 130.847 92.075 1.00 70.81 O
TER
ATOM 1 O3' G B 542 -4.707 119.406 82.199 1.00 44.47 O
ATOM 2 P U B 543 -4.767 117.798 82.089 1.00 48.89 P
ATOM 3 OP1 U B 543 -4.462 117.402 80.678 1.00 47.82 O
ATOM 4 OP2 U B 543 -6.047 117.349 82.715 1.00 49.93 O
ATOM 5 O5' U B 543 -3.540 117.327 82.995 1.00 46.82 O
ATOM 6 C5' U B 543 -3.710 117.054 84.396 1.00 45.85 C
ATOM 7 C4' U B 543 -2.946 118.055 85.235 1.00 45.35 C
ATOM 8 O4' U B 543 -3.451 119.392 84.980 1.00 46.18 O
ATOM 9 C3' U B 543 -3.157 117.870 86.726 1.00 46.42 C
ATOM 10 O3' U B 543 -2.292 116.883 87.257 1.00 46.20 O
ATOM 11 C2' U B 543 -2.892 119.257 87.284 1.00 46.39 C
ATOM 12 O2' U B 543 -1.519 119.556 87.418 1.00 48.48 O
ATOM 13 C1' U B 543 -3.507 120.132 86.193 1.00 46.31 C
ATOM 14 N1 U B 543 -4.912 120.492 86.460 1.00 47.69 N
ATOM 15 C2 U B 543 -5.174 121.386 87.495 1.00 48.27 C
ATOM 16 O2 U B 543 -4.304 121.852 88.211 1.00 47.92 O
ATOM 17 N3 U B 543 -6.501 121.706 87.662 1.00 48.64 N
ATOM 18 C4 U B 543 -7.572 121.231 86.932 1.00 48.36 C
ATOM 19 O4 U B 543 -8.706 121.642 87.184 1.00 47.74 O
ATOM 20 C5 U B 543 -7.227 120.299 85.904 1.00 47.84 C
ATOM 21 C6 U B 543 -5.944 119.970 85.706 1.00 47.90 C
ATOM 22 P C B 544 -2.783 115.982 88.486 1.00 44.46 P
ATOM 23 OP1 C B 544 -1.652 115.073 88.796 1.00 46.59 O
ATOM 24 OP2 C B 544 -4.124 115.418 88.194 1.00 44.43 O
ATOM 25 O5' C B 544 -2.927 117.026 89.675 1.00 45.58 O
TER
Atoms:
OP1: (-12.913,129.541,95.589)
OP2: (-13.511,127.837,93.752)
C3': (-8.491,128.590,94.149)
C1': (-7.864,126.315,94.013)
C5': (-10.333,128.122,95.905)
O4': (-8.777,126.461,95.091)
C8: (-9.911,125.634,92.667)
O2': (-6.171,127.948,94.440)
C6: (-8.718,123.767,89.942)
C5: (-9.038,124.529,91.078)
C4: (-7.987,124.956,91.870)
P: (-12.829,128.159,95.034)
C4': (-8.922,127.870,95.422)
C2': (-7.338,127.714,93.678)
C2: (-6.500,123.989,90.561)
N1: (-7.413,123.506,89.707)
N3: (-6.677,124.719,91.663)
N6: (-9.629,123.295,89.090)
N7: (-10.247,124.966,91.593)
N9: (-8.560,125.666,92.900)
O5': (-11.287,127.781,94.877)
O3': (-8.059,129.929,94.405)
OP2: (-13.511,127.837,93.752)
C3': (-8.491,128.590,94.149)
C1': (-7.864,126.315,94.013)
C5': (-10.333,128.122,95.905)
O4': (-8.777,126.461,95.091)
C8: (-9.911,125.634,92.667)
O2': (-6.171,127.948,94.440)
C6: (-8.718,123.767,89.942)
C5: (-9.038,124.529,91.078)
C4: (-7.987,124.956,91.870)
P: (-12.829,128.159,95.034)
C4': (-8.922,127.870,95.422)
C2': (-7.338,127.714,93.678)
C2: (-6.500,123.989,90.561)
N1: (-7.413,123.506,89.707)
N3: (-6.677,124.719,91.663)
N6: (-9.629,123.295,89.090)
N7: (-10.247,124.966,91.593)
N9: (-8.560,125.666,92.900)
O5': (-11.287,127.781,94.877)
O3': (-8.059,129.929,94.405)
C4: (-7.572,121.231,86.932)
N3: (-6.501,121.706,87.662)
OP1: (-4.462,117.402,80.678)
OP2: (-6.047,117.349,82.715)
C2: (-5.174,121.386,87.495)
C1': (-3.507,120.132,86.193)
C3': (-3.157,117.870,86.726)
O5': (-3.540,117.327,82.995)
O4': (-3.451,119.392,84.980)
C5': (-3.710,117.054,84.396)
P: (-4.767,117.798,82.089)
C4': (-2.946,118.055,85.235)
C2': (-2.892,119.257,87.284)
O2': (-1.519,119.556,87.418)
N1: (-4.912,120.492,86.460)
O4: (-8.706,121.642,87.184)
O2: (-4.304,121.852,88.211)
C6: (-5.944,119.970,85.706)
C5: (-7.227,120.299,85.904)
O3': (-2.292,116.883,87.257)
N3: (-6.501,121.706,87.662)
OP1: (-4.462,117.402,80.678)
OP2: (-6.047,117.349,82.715)
C2: (-5.174,121.386,87.495)
C1': (-3.507,120.132,86.193)
C3': (-3.157,117.870,86.726)
O5': (-3.540,117.327,82.995)
O4': (-3.451,119.392,84.980)
C5': (-3.710,117.054,84.396)
P: (-4.767,117.798,82.089)
C4': (-2.946,118.055,85.235)
C2': (-2.892,119.257,87.284)
O2': (-1.519,119.556,87.418)
N1: (-4.912,120.492,86.460)
O4: (-8.706,121.642,87.184)
O2: (-4.304,121.852,88.211)
C6: (-5.944,119.970,85.706)
C5: (-7.227,120.299,85.904)
O3': (-2.292,116.883,87.257)
Image (generated by PyMOL):