ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IQR:A84:A63

Extra

PDB:
ATOM 1 O3' A A 83 59.909 38.055 30.563 1.00 61.18 O
ATOM 2 P A A 84 60.226 39.544 31.058 1.00 61.73 P
ATOM 3 OP1 A A 84 61.571 39.578 31.699 1.00 61.47 O
ATOM 4 OP2 A A 84 59.028 39.991 31.821 1.00 59.77 O
ATOM 5 O5' A A 84 60.306 40.367 29.702 1.00 59.58 O
ATOM 6 C5' A A 84 61.363 40.134 28.786 1.00 57.64 C
ATOM 7 C4' A A 84 61.107 40.879 27.507 1.00 56.37 C
ATOM 8 O4' A A 84 59.916 40.334 26.887 1.00 56.03 O
ATOM 9 C3' A A 84 60.773 42.348 27.677 1.00 56.44 C
ATOM 10 O3' A A 84 61.901 43.188 27.848 1.00 55.01 O
ATOM 11 C2' A A 84 60.013 42.647 26.399 1.00 56.19 C
ATOM 12 O2' A A 84 60.873 42.785 25.289 1.00 57.04 O
ATOM 13 C1' A A 84 59.195 41.371 26.252 1.00 56.47 C
ATOM 14 N9 A A 84 57.896 41.496 26.909 1.00 57.38 N
ATOM 15 C8 A A 84 57.467 40.937 28.089 1.00 56.68 C
ATOM 16 N7 A A 84 56.218 41.218 28.383 1.00 56.91 N
ATOM 17 C5 A A 84 55.802 42.025 27.329 1.00 58.13 C
ATOM 18 C6 A A 84 54.574 42.655 27.035 1.00 57.78 C
ATOM 19 N6 A A 84 53.490 42.562 27.803 1.00 57.70 N
ATOM 20 N1 A A 84 54.501 43.392 25.906 1.00 57.53 N
ATOM 21 C2 A A 84 55.585 43.483 25.127 1.00 57.32 C
ATOM 22 N3 A A 84 56.786 42.938 25.289 1.00 57.64 N
ATOM 23 C4 A A 84 56.830 42.212 26.421 1.00 57.86 C
ATOM 24 P G A 85 61.748 44.520 28.729 1.00 55.82 P
ATOM 25 OP1 G A 85 63.055 45.235 28.765 1.00 54.94 O
ATOM 26 OP2 G A 85 61.075 44.122 30.000 1.00 51.93 O
ATOM 27 O5' G A 85 60.738 45.420 27.888 1.00 52.81 O
TER

ATOM 1 O3' U B 62 46.103 49.310 20.189 1.00 47.62 O
ATOM 2 P U B 63 46.207 49.172 21.768 1.00 45.20 P
ATOM 3 OP1 U B 63 45.295 48.068 22.098 1.00 46.35 O
ATOM 4 OP2 U B 63 45.964 50.508 22.343 1.00 46.03 O
ATOM 5 O5' U B 63 47.725 48.731 22.024 1.00 48.60 O
ATOM 6 C5' U B 63 48.796 49.624 21.715 1.00 50.54 C
ATOM 7 C4' U B 63 50.118 48.885 21.544 1.00 52.82 C
ATOM 8 O4' U B 63 50.634 48.457 22.841 1.00 53.92 O
ATOM 9 C3' U B 63 49.992 47.580 20.765 1.00 52.98 C
ATOM 10 O3' U B 63 50.162 47.714 19.346 1.00 51.11 O
ATOM 11 C2' U B 63 51.208 46.786 21.224 1.00 54.76 C
ATOM 12 O2' U B 63 52.348 47.096 20.445 1.00 59.87 O
ATOM 13 C1' U B 63 51.394 47.276 22.659 1.00 54.35 C
ATOM 14 N1 U B 63 51.206 46.317 23.757 1.00 53.18 N
ATOM 15 C2 U B 63 52.252 45.435 23.969 1.00 51.99 C
ATOM 16 O2 U B 63 53.253 45.428 23.275 1.00 51.29 O
ATOM 17 N3 U B 63 52.085 44.560 25.010 1.00 51.50 N
ATOM 18 C4 U B 63 51.000 44.464 25.844 1.00 52.42 C
ATOM 19 O4 U B 63 51.008 43.615 26.743 1.00 50.87 O
ATOM 20 C5 U B 63 49.941 45.401 25.560 1.00 52.49 C
ATOM 21 C6 U B 63 50.080 46.277 24.548 1.00 53.61 C
ATOM 22 P C B 64 50.601 49.119 18.676 1.00 46.70 P
ATOM 23 OP1 C B 64 52.052 49.318 18.814 1.00 45.04 O
ATOM 24 OP2 C B 64 49.673 50.190 19.109 1.00 48.15 O
ATOM 25 O5' C B 64 50.310 48.842 17.135 1.00 46.23 O
TER

Atoms:
OP1: (61.571,39.578,31.699)
OP2: (59.028,39.991,31.821)
C3': (60.773,42.348,27.677)
C1': (59.195,41.371,26.252)
C5': (61.363,40.134,28.786)
O4': (59.916,40.334,26.887)
C8: (57.467,40.937,28.089)
O2': (60.873,42.785,25.289)
C6: (54.574,42.655,27.035)
C5: (55.802,42.025,27.329)
C4: (56.830,42.212,26.421)
P: (60.226,39.544,31.058)
C4': (61.107,40.879,27.507)
C2': (60.013,42.647,26.399)
C2: (55.585,43.483,25.127)
N1: (54.501,43.392,25.906)
N3: (56.786,42.938,25.289)
N6: (53.490,42.562,27.803)
N7: (56.218,41.218,28.383)
N9: (57.896,41.496,26.909)
O5': (60.306,40.367,29.702)
O3': (61.901,43.188,27.848)
C4: (51.000,44.464,25.844)
N3: (52.085,44.560,25.010)
OP1: (45.295,48.068,22.098)
OP2: (45.964,50.508,22.343)
C2: (52.252,45.435,23.969)
C1': (51.394,47.276,22.659)
C3': (49.992,47.580,20.765)
O5': (47.725,48.731,22.024)
O4': (50.634,48.457,22.841)
C5': (48.796,49.624,21.715)
P: (46.207,49.172,21.768)
C4': (50.118,48.885,21.544)
C2': (51.208,46.786,21.224)
O2': (52.348,47.096,20.445)
N1: (51.206,46.317,23.757)
O4: (51.008,43.615,26.743)
O2: (53.253,45.428,23.275)
C6: (50.080,46.277,24.548)
C5: (49.941,45.401,25.560)
O3': (50.162,47.714,19.346)
Image (generated by PyMOL):
PyMOL image
show in jmol