Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1819:A1963
Extra
PDB:
ATOM 1 O3' U A1818 -66.506 -19.068 21.322 1.00 0.01 O
ATOM 2 P G A1819 -65.944 -19.738 20.005 1.00 0.01 P
ATOM 3 OP1 G A1819 -66.706 -20.924 19.788 1.00 0.01 O
ATOM 4 OP2 G A1819 -64.503 -19.827 20.141 1.00 0.01 O
ATOM 5 O5' G A1819 -66.295 -18.701 18.915 1.00 0.01 O
ATOM 6 C5' G A1819 -67.596 -18.651 18.403 1.00 0.01 C
ATOM 7 C4' G A1819 -67.840 -17.369 17.673 1.00 0.01 C
ATOM 8 O4' G A1819 -67.287 -16.271 18.418 1.00 0.01 O
ATOM 9 C3' G A1819 -67.178 -17.236 16.328 1.00 0.01 C
ATOM 10 O3' G A1819 -67.836 -17.982 15.321 1.00 0.01 O
ATOM 11 C2' G A1819 -67.236 -15.739 16.125 1.00 0.01 C
ATOM 12 O2' G A1819 -68.552 -15.334 15.806 1.00 0.01 O
ATOM 13 C1' G A1819 -66.931 -15.248 17.532 1.00 0.01 C
ATOM 14 N9 G A1819 -65.520 -14.943 17.729 1.00 0.01 N
ATOM 15 C8 G A1819 -64.685 -15.666 18.482 1.00 0.01 C
ATOM 16 N7 G A1819 -63.503 -15.155 18.497 1.00 0.01 N
ATOM 17 C5 G A1819 -63.577 -14.028 17.731 1.00 0.01 C
ATOM 18 C6 G A1819 -62.591 -13.080 17.422 1.00 0.01 C
ATOM 19 O6 G A1819 -61.422 -13.067 17.776 1.00 0.01 O
ATOM 20 N1 G A1819 -63.065 -12.073 16.617 1.00 0.01 N
ATOM 21 C2 G A1819 -64.356 -12.010 16.173 1.00 0.01 C
ATOM 22 N2 G A1819 -64.659 -10.969 15.396 1.00 0.01 N
ATOM 23 N3 G A1819 -65.296 -12.896 16.468 1.00 0.01 N
ATOM 24 C4 G A1819 -64.829 -13.875 17.255 1.00 0.01 C
ATOM 25 P U A1820 -67.121 -18.254 13.924 1.00 0.01 P
ATOM 26 OP1 U A1820 -68.129 -18.813 13.014 1.00 0.01 O
ATOM 27 OP2 U A1820 -65.934 -19.043 14.200 1.00 0.01 O
ATOM 28 O5' U A1820 -66.700 -16.789 13.466 1.00 0.01 O
TER
ATOM 1 O3' A B1962 -73.319 -10.256 8.724 1.00 0.01 O
ATOM 2 P A B1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 3 OP1 A B1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 4 OP2 A B1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 5 O5' A B1963 -72.015 -9.527 10.702 1.00 0.01 O
ATOM 6 C5' A B1963 -71.505 -9.916 11.959 1.00 0.01 C
ATOM 7 C4' A B1963 -70.684 -11.156 11.843 1.00 0.01 C
ATOM 8 O4' A B1963 -69.606 -10.897 10.929 1.00 0.01 O
ATOM 9 C3' A B1963 -70.043 -11.614 13.133 1.00 0.01 C
ATOM 10 O3' A B1963 -69.877 -13.036 13.116 1.00 0.01 O
ATOM 11 C2' A B1963 -68.705 -10.920 13.104 1.00 0.01 C
ATOM 12 O2' A B1963 -67.722 -11.580 13.861 1.00 0.01 O
ATOM 13 C1' A B1963 -68.380 -10.912 11.608 1.00 0.01 C
ATOM 14 N9 A B1963 -67.650 -9.744 11.152 1.00 0.12 N
ATOM 15 C8 A B1963 -68.213 -8.656 10.546 1.00 0.12 C
ATOM 16 N7 A B1963 -67.386 -7.726 10.150 1.00 0.12 N
ATOM 17 C5 A B1963 -66.181 -8.267 10.516 1.00 0.12 C
ATOM 18 C6 A B1963 -64.890 -7.764 10.360 1.00 0.12 C
ATOM 19 N6 A B1963 -64.638 -6.567 9.805 1.00 0.12 N
ATOM 20 N1 A B1963 -63.872 -8.534 10.797 1.00 0.12 N
ATOM 21 C2 A B1963 -64.181 -9.719 11.347 1.00 0.12 C
ATOM 22 N3 A B1963 -65.362 -10.307 11.542 1.00 0.12 N
ATOM 23 C4 A B1963 -66.324 -9.512 11.098 1.00 0.12 C
ATOM 24 P U B1964 -71.069 -13.947 13.645 1.00 12.12 P
ATOM 25 OP1 U B1964 -72.054 -13.036 14.239 1.00 12.12 O
ATOM 26 OP2 U B1964 -70.485 -14.981 14.502 1.00 12.12 O
ATOM 27 O5' U B1964 -71.673 -14.600 12.322 1.00 12.12 O
TER
ATOM 2 P G A1819 -65.944 -19.738 20.005 1.00 0.01 P
ATOM 3 OP1 G A1819 -66.706 -20.924 19.788 1.00 0.01 O
ATOM 4 OP2 G A1819 -64.503 -19.827 20.141 1.00 0.01 O
ATOM 5 O5' G A1819 -66.295 -18.701 18.915 1.00 0.01 O
ATOM 6 C5' G A1819 -67.596 -18.651 18.403 1.00 0.01 C
ATOM 7 C4' G A1819 -67.840 -17.369 17.673 1.00 0.01 C
ATOM 8 O4' G A1819 -67.287 -16.271 18.418 1.00 0.01 O
ATOM 9 C3' G A1819 -67.178 -17.236 16.328 1.00 0.01 C
ATOM 10 O3' G A1819 -67.836 -17.982 15.321 1.00 0.01 O
ATOM 11 C2' G A1819 -67.236 -15.739 16.125 1.00 0.01 C
ATOM 12 O2' G A1819 -68.552 -15.334 15.806 1.00 0.01 O
ATOM 13 C1' G A1819 -66.931 -15.248 17.532 1.00 0.01 C
ATOM 14 N9 G A1819 -65.520 -14.943 17.729 1.00 0.01 N
ATOM 15 C8 G A1819 -64.685 -15.666 18.482 1.00 0.01 C
ATOM 16 N7 G A1819 -63.503 -15.155 18.497 1.00 0.01 N
ATOM 17 C5 G A1819 -63.577 -14.028 17.731 1.00 0.01 C
ATOM 18 C6 G A1819 -62.591 -13.080 17.422 1.00 0.01 C
ATOM 19 O6 G A1819 -61.422 -13.067 17.776 1.00 0.01 O
ATOM 20 N1 G A1819 -63.065 -12.073 16.617 1.00 0.01 N
ATOM 21 C2 G A1819 -64.356 -12.010 16.173 1.00 0.01 C
ATOM 22 N2 G A1819 -64.659 -10.969 15.396 1.00 0.01 N
ATOM 23 N3 G A1819 -65.296 -12.896 16.468 1.00 0.01 N
ATOM 24 C4 G A1819 -64.829 -13.875 17.255 1.00 0.01 C
ATOM 25 P U A1820 -67.121 -18.254 13.924 1.00 0.01 P
ATOM 26 OP1 U A1820 -68.129 -18.813 13.014 1.00 0.01 O
ATOM 27 OP2 U A1820 -65.934 -19.043 14.200 1.00 0.01 O
ATOM 28 O5' U A1820 -66.700 -16.789 13.466 1.00 0.01 O
TER
ATOM 1 O3' A B1962 -73.319 -10.256 8.724 1.00 0.01 O
ATOM 2 P A B1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 3 OP1 A B1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 4 OP2 A B1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 5 O5' A B1963 -72.015 -9.527 10.702 1.00 0.01 O
ATOM 6 C5' A B1963 -71.505 -9.916 11.959 1.00 0.01 C
ATOM 7 C4' A B1963 -70.684 -11.156 11.843 1.00 0.01 C
ATOM 8 O4' A B1963 -69.606 -10.897 10.929 1.00 0.01 O
ATOM 9 C3' A B1963 -70.043 -11.614 13.133 1.00 0.01 C
ATOM 10 O3' A B1963 -69.877 -13.036 13.116 1.00 0.01 O
ATOM 11 C2' A B1963 -68.705 -10.920 13.104 1.00 0.01 C
ATOM 12 O2' A B1963 -67.722 -11.580 13.861 1.00 0.01 O
ATOM 13 C1' A B1963 -68.380 -10.912 11.608 1.00 0.01 C
ATOM 14 N9 A B1963 -67.650 -9.744 11.152 1.00 0.12 N
ATOM 15 C8 A B1963 -68.213 -8.656 10.546 1.00 0.12 C
ATOM 16 N7 A B1963 -67.386 -7.726 10.150 1.00 0.12 N
ATOM 17 C5 A B1963 -66.181 -8.267 10.516 1.00 0.12 C
ATOM 18 C6 A B1963 -64.890 -7.764 10.360 1.00 0.12 C
ATOM 19 N6 A B1963 -64.638 -6.567 9.805 1.00 0.12 N
ATOM 20 N1 A B1963 -63.872 -8.534 10.797 1.00 0.12 N
ATOM 21 C2 A B1963 -64.181 -9.719 11.347 1.00 0.12 C
ATOM 22 N3 A B1963 -65.362 -10.307 11.542 1.00 0.12 N
ATOM 23 C4 A B1963 -66.324 -9.512 11.098 1.00 0.12 C
ATOM 24 P U B1964 -71.069 -13.947 13.645 1.00 12.12 P
ATOM 25 OP1 U B1964 -72.054 -13.036 14.239 1.00 12.12 O
ATOM 26 OP2 U B1964 -70.485 -14.981 14.502 1.00 12.12 O
ATOM 27 O5' U B1964 -71.673 -14.600 12.322 1.00 12.12 O
TER
Atoms:
OP1: (-66.706,-20.924,19.788)
OP2: (-64.503,-19.827,20.141)
C3': (-67.178,-17.236,16.328)
C1': (-66.931,-15.248,17.532)
C5': (-67.596,-18.651,18.403)
O6: (-61.422,-13.067,17.776)
O4': (-67.287,-16.271,18.418)
C8: (-64.685,-15.666,18.482)
C2: (-64.356,-12.010,16.173)
C6: (-62.591,-13.080,17.422)
C5: (-63.577,-14.028,17.731)
C4: (-64.829,-13.875,17.255)
P: (-65.944,-19.738,20.005)
C4': (-67.840,-17.369,17.673)
C2': (-67.236,-15.739,16.125)
O2': (-68.552,-15.334,15.806)
N1: (-63.065,-12.073,16.617)
N2: (-64.659,-10.969,15.396)
N3: (-65.296,-12.896,16.468)
N7: (-63.503,-15.155,18.497)
N9: (-65.520,-14.943,17.729)
O5': (-66.295,-18.701,18.915)
O3': (-67.836,-17.982,15.321)
OP2: (-64.503,-19.827,20.141)
C3': (-67.178,-17.236,16.328)
C1': (-66.931,-15.248,17.532)
C5': (-67.596,-18.651,18.403)
O6: (-61.422,-13.067,17.776)
O4': (-67.287,-16.271,18.418)
C8: (-64.685,-15.666,18.482)
C2: (-64.356,-12.010,16.173)
C6: (-62.591,-13.080,17.422)
C5: (-63.577,-14.028,17.731)
C4: (-64.829,-13.875,17.255)
P: (-65.944,-19.738,20.005)
C4': (-67.840,-17.369,17.673)
C2': (-67.236,-15.739,16.125)
O2': (-68.552,-15.334,15.806)
N1: (-63.065,-12.073,16.617)
N2: (-64.659,-10.969,15.396)
N3: (-65.296,-12.896,16.468)
N7: (-63.503,-15.155,18.497)
N9: (-65.520,-14.943,17.729)
O5': (-66.295,-18.701,18.915)
O3': (-67.836,-17.982,15.321)
OP1: (-73.871,-11.199,10.970)
OP2: (-74.343,-8.784,10.413)
C3': (-70.043,-11.614,13.133)
C1': (-68.380,-10.912,11.608)
C5': (-71.505,-9.916,11.959)
O4': (-69.606,-10.897,10.929)
C8: (-68.213,-8.656,10.546)
O2': (-67.722,-11.580,13.861)
C6: (-64.890,-7.764,10.360)
C5: (-66.181,-8.267,10.516)
C4: (-66.324,-9.512,11.098)
P: (-73.478,-9.935,10.288)
C4': (-70.684,-11.156,11.843)
C2': (-68.705,-10.920,13.104)
C2: (-64.181,-9.719,11.347)
N1: (-63.872,-8.534,10.797)
N3: (-65.362,-10.307,11.542)
N6: (-64.638,-6.567,9.805)
N7: (-67.386,-7.726,10.150)
N9: (-67.650,-9.744,11.152)
O5': (-72.015,-9.527,10.702)
O3': (-69.877,-13.036,13.116)
OP2: (-74.343,-8.784,10.413)
C3': (-70.043,-11.614,13.133)
C1': (-68.380,-10.912,11.608)
C5': (-71.505,-9.916,11.959)
O4': (-69.606,-10.897,10.929)
C8: (-68.213,-8.656,10.546)
O2': (-67.722,-11.580,13.861)
C6: (-64.890,-7.764,10.360)
C5: (-66.181,-8.267,10.516)
C4: (-66.324,-9.512,11.098)
P: (-73.478,-9.935,10.288)
C4': (-70.684,-11.156,11.843)
C2': (-68.705,-10.920,13.104)
C2: (-64.181,-9.719,11.347)
N1: (-63.872,-8.534,10.797)
N3: (-65.362,-10.307,11.542)
N6: (-64.638,-6.567,9.805)
N7: (-67.386,-7.726,10.150)
N9: (-67.650,-9.744,11.152)
O5': (-72.015,-9.527,10.702)
O3': (-69.877,-13.036,13.116)
Image (generated by PyMOL):