ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0998:01255

Extra

PDB:
ATOM 1 O3' G A 997 42.599 90.307 63.146 1.00 25.89 O
ATOM 2 P G A 998 43.683 90.892 64.176 1.00 29.78 P
ATOM 3 OP1 G A 998 44.457 91.920 63.440 1.00 31.21 O
ATOM 4 OP2 G A 998 44.402 89.784 64.855 1.00 29.09 O
ATOM 5 O5' G A 998 42.797 91.635 65.264 1.00 28.56 O
ATOM 6 C5' G A 998 42.098 92.838 64.923 1.00 30.09 C
ATOM 7 C4' G A 998 41.488 93.449 66.152 1.00 29.55 C
ATOM 8 O4' G A 998 40.436 92.585 66.659 1.00 28.76 O
ATOM 9 C3' G A 998 42.419 93.576 67.339 1.00 27.51 C
ATOM 10 O3' G A 998 43.295 94.680 67.231 1.00 27.96 O
ATOM 11 C2' G A 998 41.426 93.741 68.469 1.00 26.87 C
ATOM 12 O2' G A 998 40.880 95.040 68.497 1.00 29.69 O
ATOM 13 C1' G A 998 40.358 92.718 68.068 1.00 26.68 C
ATOM 14 N9 G A 998 40.691 91.441 68.688 1.00 24.61 N
ATOM 15 C8 G A 998 41.378 90.385 68.139 1.00 24.19 C
ATOM 16 N7 G A 998 41.674 89.460 69.013 1.00 23.51 N
ATOM 17 C5 G A 998 41.115 89.918 70.199 1.00 22.34 C
ATOM 18 C6 G A 998 41.140 89.367 71.498 1.00 21.87 C
ATOM 19 O6 G A 998 41.708 88.343 71.889 1.00 22.35 O
ATOM 20 N1 G A 998 40.424 90.151 72.398 1.00 22.66 N
ATOM 21 C2 G A 998 39.781 91.325 72.091 1.00 21.92 C
ATOM 22 N2 G A 998 39.129 91.935 73.094 1.00 20.56 N
ATOM 23 N3 G A 998 39.774 91.861 70.890 1.00 21.70 N
ATOM 24 C4 G A 998 40.458 91.112 70.000 1.00 23.13 C
ATOM 25 P A A 999 44.842 94.497 67.612 1.00 28.69 P
ATOM 26 OP1 A A 999 45.329 95.847 67.960 1.00 26.26 O
ATOM 27 OP2 A A 999 45.530 93.710 66.565 1.00 29.12 O
ATOM 28 O5' A A 999 44.814 93.598 68.921 1.00 27.19 O
TER

ATOM 1 O3' G B1254 40.128 98.009 73.040 1.00 30.05 O
ATOM 2 P A B1255 39.086 98.285 71.844 1.00 29.98 P
ATOM 3 OP1 A B1255 39.880 98.419 70.593 1.00 28.89 O
ATOM 4 OP2 A B1255 38.177 99.380 72.257 1.00 27.78 O
ATOM 5 O5' A B1255 38.239 96.937 71.728 1.00 30.89 O
ATOM 6 C5' A B1255 38.816 95.743 71.140 1.00 31.52 C
ATOM 7 C4' A B1255 37.787 94.629 71.073 1.00 32.20 C
ATOM 8 O4' A B1255 37.372 94.247 72.415 1.00 30.35 O
ATOM 9 C3' A B1255 36.489 94.983 70.368 1.00 32.08 C
ATOM 10 O3' A B1255 36.592 94.881 68.949 1.00 32.44 O
ATOM 11 C2' A B1255 35.512 93.985 70.972 1.00 29.54 C
ATOM 12 O2' A B1255 35.641 92.698 70.422 1.00 30.64 O
ATOM 13 C1' A B1255 35.985 93.950 72.423 1.00 28.80 C
ATOM 14 N9 A B1255 35.301 94.968 73.219 1.00 28.70 N
ATOM 15 C8 A B1255 35.745 96.228 73.517 1.00 29.12 C
ATOM 16 N7 A B1255 34.888 96.941 74.201 1.00 29.94 N
ATOM 17 C5 A B1255 33.810 96.092 74.374 1.00 28.90 C
ATOM 18 C6 A B1255 32.573 96.263 75.003 1.00 30.00 C
ATOM 19 N6 A B1255 32.195 97.396 75.592 1.00 31.93 N
ATOM 20 N1 A B1255 31.720 95.221 75.005 1.00 31.20 N
ATOM 21 C2 A B1255 32.098 94.086 74.410 1.00 31.98 C
ATOM 22 N3 A B1255 33.234 93.804 73.781 1.00 31.50 N
ATOM 23 C4 A B1255 34.057 94.866 73.794 1.00 29.58 C
ATOM 24 P U B1256 35.629 95.772 68.026 1.00 32.21 P
ATOM 25 OP1 U B1256 35.885 95.431 66.608 1.00 31.58 O
ATOM 26 OP2 U B1256 35.769 97.173 68.479 1.00 32.13 O
ATOM 27 O5' U B1256 34.169 95.261 68.406 1.00 32.96 O
TER

Atoms:
OP1: (44.457,91.920,63.440)
OP2: (44.402,89.784,64.855)
C3': (42.419,93.576,67.339)
C1': (40.358,92.718,68.068)
C5': (42.098,92.838,64.923)
O6: (41.708,88.343,71.889)
O4': (40.436,92.585,66.659)
C8: (41.378,90.385,68.139)
C2: (39.781,91.325,72.091)
C6: (41.140,89.367,71.498)
C5: (41.115,89.918,70.199)
C4: (40.458,91.112,70.000)
P: (43.683,90.892,64.176)
C4': (41.488,93.449,66.152)
C2': (41.426,93.741,68.469)
O2': (40.880,95.040,68.497)
N1: (40.424,90.151,72.398)
N2: (39.129,91.935,73.094)
N3: (39.774,91.861,70.890)
N7: (41.674,89.460,69.013)
N9: (40.691,91.441,68.688)
O5': (42.797,91.635,65.264)
O3': (43.295,94.680,67.231)
OP1: (39.880,98.419,70.593)
OP2: (38.177,99.380,72.257)
C3': (36.489,94.983,70.368)
C1': (35.985,93.950,72.423)
C5': (38.816,95.743,71.140)
O4': (37.372,94.247,72.415)
C8: (35.745,96.228,73.517)
O2': (35.641,92.698,70.422)
C6: (32.573,96.263,75.003)
C5: (33.810,96.092,74.374)
C4: (34.057,94.866,73.794)
P: (39.086,98.285,71.844)
C4': (37.787,94.629,71.073)
C2': (35.512,93.985,70.972)
C2: (32.098,94.086,74.410)
N1: (31.720,95.221,75.005)
N3: (33.234,93.804,73.781)
N6: (32.195,97.396,75.592)
N7: (34.888,96.941,74.201)
N9: (35.301,94.968,73.219)
O5': (38.239,96.937,71.728)
O3': (36.592,94.881,68.949)
Image (generated by PyMOL):
PyMOL image
show in jmol