ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01080:01207

Extra

PDB:
ATOM 1 O3' U A1079 40.118 101.694 132.674 1.00 43.12 O
ATOM 2 P G A1080 40.018 102.223 131.155 1.00 42.18 P
ATOM 3 OP1 G A1080 40.997 101.420 130.385 1.00 43.21 O
ATOM 4 OP2 G A1080 40.078 103.707 131.117 1.00 38.39 O
ATOM 5 O5' G A1080 38.575 101.761 130.683 1.00 39.69 O
ATOM 6 C5' G A1080 38.193 100.386 130.766 1.00 38.31 C
ATOM 7 C4' G A1080 36.694 100.273 130.760 1.00 40.47 C
ATOM 8 O4' G A1080 36.151 100.987 131.906 1.00 41.01 O
ATOM 9 C3' G A1080 35.983 100.920 129.585 1.00 38.94 C
ATOM 10 O3' G A1080 36.022 100.097 128.428 1.00 39.66 O
ATOM 11 C2' G A1080 34.576 101.063 130.141 1.00 38.98 C
ATOM 12 O2' G A1080 33.938 99.808 130.194 1.00 39.38 O
ATOM 13 C1' G A1080 34.872 101.511 131.575 1.00 39.68 C
ATOM 14 N9 G A1080 34.920 102.966 131.693 1.00 37.63 N
ATOM 15 C8 G A1080 36.043 103.758 131.727 1.00 37.50 C
ATOM 16 N7 G A1080 35.769 105.033 131.813 1.00 37.74 N
ATOM 17 C5 G A1080 34.383 105.087 131.844 1.00 37.96 C
ATOM 18 C6 G A1080 33.513 106.199 131.933 1.00 39.29 C
ATOM 19 O6 G A1080 33.801 107.405 132.007 1.00 42.57 O
ATOM 20 N1 G A1080 32.183 105.807 131.930 1.00 36.75 N
ATOM 21 C2 G A1080 31.741 104.515 131.849 1.00 37.55 C
ATOM 22 N2 G A1080 30.405 104.352 131.851 1.00 36.85 N
ATOM 23 N3 G A1080 32.541 103.463 131.769 1.00 37.65 N
ATOM 24 C4 G A1080 33.841 103.821 131.773 1.00 38.01 C
ATOM 25 P U A1081 35.840 100.761 126.966 1.00 43.12 P
ATOM 26 OP1 U A1081 35.749 99.653 125.974 1.00 40.26 O
ATOM 27 OP2 U A1081 36.876 101.819 126.805 1.00 39.93 O
ATOM 28 O5' U A1081 34.424 101.486 127.013 1.00 38.64 O
TER

ATOM 1 O3' A B1206 25.719 103.074 129.912 1.00 38.96 O
ATOM 2 P A B1207 26.148 101.588 129.465 1.00 43.45 P
ATOM 3 OP1 A B1207 26.528 101.694 128.025 1.00 45.84 O
ATOM 4 OP2 A B1207 25.118 100.592 129.868 1.00 45.07 O
ATOM 5 O5' A B1207 27.474 101.287 130.298 1.00 43.75 O
ATOM 6 C5' A B1207 28.732 101.925 129.965 1.00 45.16 C
ATOM 7 C4' A B1207 29.864 101.298 130.748 1.00 45.14 C
ATOM 8 O4' A B1207 29.690 101.575 132.161 1.00 48.00 O
ATOM 9 C3' A B1207 29.938 99.785 130.660 1.00 44.95 C
ATOM 10 O3' A B1207 30.647 99.386 129.496 1.00 46.42 O
ATOM 11 C2' A B1207 30.650 99.410 131.952 1.00 45.59 C
ATOM 12 O2' A B1207 32.048 99.579 131.902 1.00 46.07 O
ATOM 13 C1' A B1207 30.081 100.447 132.921 1.00 46.65 C
ATOM 14 N9 A B1207 28.916 99.970 133.663 1.00 49.03 N
ATOM 15 C8 A B1207 27.588 100.236 133.428 1.00 49.88 C
ATOM 16 N7 A B1207 26.776 99.661 134.282 1.00 51.06 N
ATOM 17 C5 A B1207 27.625 98.967 135.133 1.00 51.44 C
ATOM 18 C6 A B1207 27.384 98.153 136.259 1.00 52.27 C
ATOM 19 N6 A B1207 26.168 97.897 136.740 1.00 51.60 N
ATOM 20 N1 A B1207 28.452 97.608 136.881 1.00 51.82 N
ATOM 21 C2 A B1207 29.672 97.876 136.405 1.00 52.97 C
ATOM 22 N3 A B1207 30.027 98.630 135.363 1.00 51.01 N
ATOM 23 C4 A B1207 28.944 99.149 134.762 1.00 50.41 C
ATOM 24 P U B1208 30.272 98.009 128.767 1.00 46.66 P
ATOM 25 OP1 U B1208 31.168 97.838 127.598 1.00 49.30 O
ATOM 26 OP2 U B1208 28.810 97.959 128.574 1.00 46.29 O
ATOM 27 O5' U B1208 30.674 96.906 129.841 1.00 48.78 O
TER

Atoms:
OP1: (40.997,101.420,130.385)
OP2: (40.078,103.707,131.117)
C3': (35.983,100.920,129.585)
C1': (34.872,101.511,131.575)
C5': (38.193,100.386,130.766)
O6: (33.801,107.405,132.007)
O4': (36.151,100.987,131.906)
C8: (36.043,103.758,131.727)
C2: (31.741,104.515,131.849)
C6: (33.513,106.199,131.933)
C5: (34.383,105.087,131.844)
C4: (33.841,103.821,131.773)
P: (40.018,102.223,131.155)
C4': (36.694,100.273,130.760)
C2': (34.576,101.063,130.141)
O2': (33.938,99.808,130.194)
N1: (32.183,105.807,131.930)
N2: (30.405,104.352,131.851)
N3: (32.541,103.463,131.769)
N7: (35.769,105.033,131.813)
N9: (34.920,102.966,131.693)
O5': (38.575,101.761,130.683)
O3': (36.022,100.097,128.428)
OP1: (26.528,101.694,128.025)
OP2: (25.118,100.592,129.868)
C3': (29.938,99.785,130.660)
C1': (30.081,100.447,132.921)
C5': (28.732,101.925,129.965)
O4': (29.690,101.575,132.161)
C8: (27.588,100.236,133.428)
O2': (32.048,99.579,131.902)
C6: (27.384,98.153,136.259)
C5: (27.625,98.967,135.133)
C4: (28.944,99.149,134.762)
P: (26.148,101.588,129.465)
C4': (29.864,101.298,130.748)
C2': (30.650,99.410,131.952)
C2: (29.672,97.876,136.405)
N1: (28.452,97.608,136.881)
N3: (30.027,98.630,135.363)
N6: (26.168,97.897,136.740)
N7: (26.776,99.661,134.282)
N9: (28.916,99.970,133.663)
O5': (27.474,101.287,130.298)
O3': (30.647,99.386,129.496)
Image (generated by PyMOL):
PyMOL image
show in jmol