ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52726:52092

Extra

PDB:
ATOM 1 O3' G A2725 172.146 4.755 238.543 1.00 57.90 O
ATOM 2 P G A2726 171.733 6.114 237.785 1.00 43.96 P
ATOM 3 OP1 G A2726 171.501 7.180 238.838 1.00 43.82 O
ATOM 4 OP2 G A2726 170.615 5.785 236.819 1.00 43.96 O
ATOM 5 O5' G A2726 173.049 6.461 236.969 1.00 44.15 O
ATOM 6 C5' G A2726 174.078 7.185 237.576 1.00 44.17 C
ATOM 7 C4' G A2726 175.197 7.373 236.634 1.00 44.38 C
ATOM 8 O4' G A2726 175.463 6.132 235.936 1.00 44.50 O
ATOM 9 C3' G A2726 174.948 8.322 235.514 1.00 44.45 C
ATOM 10 O3' G A2726 174.988 9.654 235.915 1.00 44.40 O
ATOM 11 C2' G A2726 176.079 7.954 234.598 1.00 44.68 C
ATOM 12 O2' G A2726 177.294 8.353 235.187 1.00 44.74 O
ATOM 13 C1' G A2726 175.984 6.432 234.658 1.00 44.69 C
ATOM 14 N9 G A2726 175.042 5.926 233.631 1.00 44.72 N
ATOM 15 C8 G A2726 173.783 5.431 233.818 1.00 44.58 C
ATOM 16 N7 G A2726 173.180 5.123 232.715 1.00 44.66 N
ATOM 17 C5 G A2726 174.072 5.450 231.730 1.00 44.86 C
ATOM 18 C6 G A2726 173.964 5.345 230.332 1.00 45.04 C
ATOM 19 O6 G A2726 173.032 4.957 229.644 1.00 45.05 O
ATOM 20 N1 G A2726 175.107 5.782 229.725 1.00 45.23 N
ATOM 21 C2 G A2726 176.189 6.276 230.342 1.00 45.25 C
ATOM 22 N2 G A2726 177.138 6.663 229.547 1.00 45.45 N
ATOM 23 N3 G A2726 176.318 6.397 231.618 1.00 45.09 N
ATOM 24 C4 G A2726 175.221 5.966 232.266 1.00 44.90 C
ATOM 25 P U A2727 173.866 10.685 235.427 1.00 44.19 P
ATOM 26 OP1 U A2727 174.110 11.913 236.179 1.00 44.14 O
ATOM 27 OP2 U A2727 172.570 10.015 235.566 1.00 44.06 O
ATOM 28 O5' U A2727 174.197 10.915 233.895 1.00 44.40 O
TER

ATOM 1 O3' A B2091 184.202 12.593 232.948 1.00 39.96 O
ATOM 2 P A B2092 182.738 13.185 233.184 1.00 47.16 P
ATOM 3 OP1 A B2092 182.647 14.415 232.363 1.00 47.26 O
ATOM 4 OP2 A B2092 182.518 13.280 234.630 1.00 46.97 O
ATOM 5 O5' A B2092 181.804 12.077 232.596 1.00 47.10 O
ATOM 6 C5' A B2092 181.431 12.101 231.245 1.00 47.22 C
ATOM 7 C4' A B2092 180.389 11.091 230.997 1.00 47.11 C
ATOM 8 O4' A B2092 179.857 11.302 229.685 1.00 47.22 O
ATOM 9 C3' A B2092 180.877 9.650 231.058 1.00 47.18 C
ATOM 10 O3' A B2092 180.037 8.879 231.913 1.00 46.97 O
ATOM 11 C2' A B2092 180.772 9.176 229.609 1.00 47.36 C
ATOM 12 O2' A B2092 180.503 7.780 229.420 1.00 47.38 O
ATOM 13 C1' A B2092 179.663 10.075 229.082 1.00 47.29 C
ATOM 14 N9 A B2092 179.700 10.230 227.661 1.00 47.50 N
ATOM 15 C8 A B2092 180.787 10.164 226.876 1.00 47.76 C
ATOM 16 N7 A B2092 180.460 10.139 225.609 1.00 47.92 N
ATOM 17 C5 A B2092 179.083 10.150 225.613 1.00 47.74 C
ATOM 18 C6 A B2092 178.154 10.102 224.599 1.00 47.79 C
ATOM 19 N6 A B2092 178.510 10.069 223.343 1.00 48.05 N
ATOM 20 N1 A B2092 176.863 10.118 224.901 1.00 47.59 N
ATOM 21 C2 A B2092 176.547 10.168 226.193 1.00 47.35 C
ATOM 22 N3 A B2092 177.308 10.203 227.271 1.00 47.27 N
ATOM 23 C4 A B2092 178.594 10.196 226.885 1.00 47.48 C
ATOM 24 P U B2093 180.714 8.089 233.145 1.00 46.19 P
ATOM 25 OP1 U B2093 179.693 7.894 234.164 1.00 45.94 O
ATOM 26 OP2 U B2093 181.937 8.835 233.513 1.00 46.29 O
ATOM 27 O5' U B2093 181.077 6.676 232.521 1.00 46.34 O
TER

Atoms:
OP1: (171.501,7.180,238.838)
OP2: (170.615,5.785,236.819)
C3': (174.948,8.322,235.514)
C1': (175.984,6.432,234.658)
C5': (174.078,7.185,237.576)
O6: (173.032,4.957,229.644)
O4': (175.463,6.132,235.936)
C8: (173.783,5.431,233.818)
C2: (176.189,6.276,230.342)
C6: (173.964,5.345,230.332)
C5: (174.072,5.450,231.730)
C4: (175.221,5.966,232.266)
P: (171.733,6.114,237.785)
C4': (175.197,7.373,236.634)
C2': (176.079,7.954,234.598)
O2': (177.294,8.353,235.187)
N1: (175.107,5.782,229.725)
N2: (177.138,6.663,229.547)
N3: (176.318,6.397,231.618)
N7: (173.180,5.123,232.715)
N9: (175.042,5.926,233.631)
O5': (173.049,6.461,236.969)
O3': (174.988,9.654,235.915)
OP1: (182.647,14.415,232.363)
OP2: (182.518,13.280,234.630)
C3': (180.877,9.650,231.058)
C1': (179.663,10.075,229.082)
C5': (181.431,12.101,231.245)
O4': (179.857,11.302,229.685)
C8: (180.787,10.164,226.876)
O2': (180.503,7.780,229.420)
C6: (178.154,10.102,224.599)
C5: (179.083,10.150,225.613)
C4: (178.594,10.196,226.885)
P: (182.738,13.185,233.184)
C4': (180.389,11.091,230.997)
C2': (180.772,9.176,229.609)
C2: (176.547,10.168,226.193)
N1: (176.863,10.118,224.901)
N3: (177.308,10.203,227.271)
N6: (178.510,10.069,223.343)
N7: (180.460,10.139,225.609)
N9: (179.700,10.230,227.661)
O5': (181.804,12.077,232.596)
O3': (180.037,8.879,231.913)
Image (generated by PyMOL):
PyMOL image
show in jmol