ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0998:01255

Extra

PDB:
ATOM 1 O3' G A 997 42.644 89.718 63.255 1.00 31.59 O
ATOM 2 P G A 998 43.792 90.272 64.236 1.00 32.52 P
ATOM 3 OP1 G A 998 44.603 91.222 63.441 1.00 33.11 O
ATOM 4 OP2 G A 998 44.469 89.134 64.918 1.00 28.84 O
ATOM 5 O5' G A 998 42.966 91.085 65.329 1.00 30.54 O
ATOM 6 C5' G A 998 42.253 92.277 64.968 1.00 31.54 C
ATOM 7 C4' G A 998 41.553 92.855 66.172 1.00 33.29 C
ATOM 8 O4' G A 998 40.519 91.935 66.630 1.00 33.35 O
ATOM 9 C3' G A 998 42.400 93.047 67.422 1.00 32.91 C
ATOM 10 O3' G A 998 43.236 94.184 67.359 1.00 34.24 O
ATOM 11 C2' G A 998 41.320 93.171 68.481 1.00 31.91 C
ATOM 12 O2' G A 998 40.664 94.420 68.439 1.00 31.62 O
ATOM 13 C1' G A 998 40.364 92.060 68.035 1.00 30.30 C
ATOM 14 N9 G A 998 40.803 90.822 68.667 1.00 28.37 N
ATOM 15 C8 G A 998 41.571 89.816 68.129 1.00 24.92 C
ATOM 16 N7 G A 998 41.902 88.907 69.007 1.00 23.08 N
ATOM 17 C5 G A 998 41.287 89.323 70.184 1.00 23.27 C
ATOM 18 C6 G A 998 41.302 88.761 71.482 1.00 24.69 C
ATOM 19 O6 G A 998 41.849 87.724 71.868 1.00 28.79 O
ATOM 20 N1 G A 998 40.582 89.532 72.382 1.00 23.51 N
ATOM 21 C2 G A 998 39.910 90.683 72.073 1.00 24.89 C
ATOM 22 N2 G A 998 39.261 91.297 73.085 1.00 26.12 N
ATOM 23 N3 G A 998 39.872 91.205 70.867 1.00 24.72 N
ATOM 24 C4 G A 998 40.585 90.484 69.982 1.00 25.21 C
ATOM 25 P A A 999 44.810 94.007 67.571 1.00 33.58 P
ATOM 26 OP1 A A 999 45.340 95.349 67.899 1.00 36.10 O
ATOM 27 OP2 A A 999 45.355 93.261 66.418 1.00 37.80 O
ATOM 28 O5' A A 999 44.936 93.063 68.852 1.00 36.17 O
TER

ATOM 1 O3' G B1254 40.103 97.466 73.095 1.00 30.45 O
ATOM 2 P A B1255 38.998 97.750 71.948 1.00 30.48 P
ATOM 3 OP1 A B1255 39.738 97.945 70.690 1.00 31.51 O
ATOM 4 OP2 A B1255 38.018 98.773 72.383 1.00 28.92 O
ATOM 5 O5' A B1255 38.194 96.375 71.820 1.00 33.70 O
ATOM 6 C5' A B1255 38.805 95.192 71.264 1.00 31.39 C
ATOM 7 C4' A B1255 37.811 94.044 71.246 1.00 33.13 C
ATOM 8 O4' A B1255 37.430 93.697 72.611 1.00 33.68 O
ATOM 9 C3' A B1255 36.484 94.326 70.555 1.00 32.55 C
ATOM 10 O3' A B1255 36.556 94.190 69.141 1.00 30.53 O
ATOM 11 C2' A B1255 35.564 93.300 71.200 1.00 32.75 C
ATOM 12 O2' A B1255 35.761 92.004 70.667 1.00 31.21 O
ATOM 13 C1' A B1255 36.051 93.347 72.652 1.00 31.52 C
ATOM 14 N9 A B1255 35.341 94.367 73.432 1.00 30.69 N
ATOM 15 C8 A B1255 35.773 95.630 73.764 1.00 31.19 C
ATOM 16 N7 A B1255 34.888 96.336 74.436 1.00 28.96 N
ATOM 17 C5 A B1255 33.809 95.476 74.565 1.00 28.52 C
ATOM 18 C6 A B1255 32.550 95.627 75.168 1.00 29.53 C
ATOM 19 N6 A B1255 32.160 96.733 75.800 1.00 27.74 N
ATOM 20 N1 A B1255 31.695 94.584 75.104 1.00 29.73 N
ATOM 21 C2 A B1255 32.097 93.466 74.496 1.00 30.03 C
ATOM 22 N3 A B1255 33.259 93.196 73.905 1.00 30.07 N
ATOM 23 C4 A B1255 34.077 94.256 73.964 1.00 29.74 C
ATOM 24 P U B1256 35.650 95.131 68.207 1.00 32.90 P
ATOM 25 OP1 U B1256 36.054 94.826 66.815 1.00 33.81 O
ATOM 26 OP2 U B1256 35.668 96.535 68.691 1.00 32.97 O
ATOM 27 O5' U B1256 34.158 94.628 68.443 1.00 34.15 O
TER

Atoms:
OP1: (44.603,91.222,63.441)
OP2: (44.469,89.134,64.918)
C3': (42.400,93.047,67.422)
C1': (40.364,92.060,68.035)
C5': (42.253,92.277,64.968)
O6: (41.849,87.724,71.868)
O4': (40.519,91.935,66.630)
C8: (41.571,89.816,68.129)
C2: (39.910,90.683,72.073)
C6: (41.302,88.761,71.482)
C5: (41.287,89.323,70.184)
C4: (40.585,90.484,69.982)
P: (43.792,90.272,64.236)
C4': (41.553,92.855,66.172)
C2': (41.320,93.171,68.481)
O2': (40.664,94.420,68.439)
N1: (40.582,89.532,72.382)
N2: (39.261,91.297,73.085)
N3: (39.872,91.205,70.867)
N7: (41.902,88.907,69.007)
N9: (40.803,90.822,68.667)
O5': (42.966,91.085,65.329)
O3': (43.236,94.184,67.359)
OP1: (39.738,97.945,70.690)
OP2: (38.018,98.773,72.383)
C3': (36.484,94.326,70.555)
C1': (36.051,93.347,72.652)
C5': (38.805,95.192,71.264)
O4': (37.430,93.697,72.611)
C8: (35.773,95.630,73.764)
O2': (35.761,92.004,70.667)
C6: (32.550,95.627,75.168)
C5: (33.809,95.476,74.565)
C4: (34.077,94.256,73.964)
P: (38.998,97.750,71.948)
C4': (37.811,94.044,71.246)
C2': (35.564,93.300,71.200)
C2: (32.097,93.466,74.496)
N1: (31.695,94.584,75.104)
N3: (33.259,93.196,73.905)
N6: (32.160,96.733,75.800)
N7: (34.888,96.336,74.436)
N9: (35.341,94.367,73.432)
O5': (38.194,96.375,71.820)
O3': (36.556,94.190,69.141)
Image (generated by PyMOL):
PyMOL image
show in jmol