Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A544:A541
Extra
PDB:
ATOM 1 O3' U A 543 142.788 109.687 -13.533 1.00 32.08 O
ATOM 2 P G A 544 144.097 110.503 -13.083 1.00 33.79 P
ATOM 3 OP1 G A 544 143.991 111.838 -13.769 1.00 35.16 O
ATOM 4 OP2 G A 544 144.235 110.422 -11.600 1.00 32.61 O
ATOM 5 O5' G A 544 145.292 109.705 -13.769 1.00 33.23 O
ATOM 6 C5' G A 544 146.517 110.362 -14.142 1.00 29.84 C
ATOM 7 C4' G A 544 147.544 109.332 -14.522 1.00 28.47 C
ATOM 8 O4' G A 544 147.864 108.559 -13.339 1.00 28.12 O
ATOM 9 C3' G A 544 147.075 108.336 -15.582 1.00 27.92 C
ATOM 10 O3' G A 544 148.172 107.956 -16.405 1.00 27.03 O
ATOM 11 C2' G A 544 146.636 107.136 -14.743 1.00 26.89 C
ATOM 12 O2' G A 544 146.787 105.917 -15.416 1.00 28.49 O
ATOM 13 C1' G A 544 147.624 107.189 -13.586 1.00 26.51 C
ATOM 14 N9 G A 544 147.165 106.590 -12.343 1.00 24.42 N
ATOM 15 C8 G A 544 146.223 107.104 -11.494 1.00 24.93 C
ATOM 16 N7 G A 544 146.083 106.406 -10.399 1.00 25.89 N
ATOM 17 C5 G A 544 146.977 105.358 -10.539 1.00 25.11 C
ATOM 18 C6 G A 544 147.298 104.301 -9.647 1.00 25.36 C
ATOM 19 O6 G A 544 146.888 104.105 -8.496 1.00 25.83 O
ATOM 20 N1 G A 544 148.228 103.434 -10.201 1.00 25.69 N
ATOM 21 C2 G A 544 148.811 103.581 -11.428 1.00 23.84 C
ATOM 22 N2 G A 544 149.687 102.624 -11.757 1.00 24.30 N
ATOM 23 N3 G A 544 148.553 104.586 -12.259 1.00 24.12 N
ATOM 24 C4 G A 544 147.628 105.432 -11.752 1.00 25.17 C
ATOM 25 P G A 545 148.690 108.938 -17.575 1.00 27.64 P
ATOM 26 OP1 G A 545 148.212 108.456 -18.920 1.00 26.11 O
ATOM 27 OP2 G A 545 148.427 110.325 -17.158 1.00 29.01 O
ATOM 28 O5' G A 545 150.239 108.705 -17.547 1.00 27.33 O
TER
ATOM 1 O3' C B 540 149.690 98.192 -15.306 1.00 27.18 O
ATOM 2 P A B 541 148.489 98.974 -14.555 1.00 25.58 P
ATOM 3 OP1 A B 541 148.751 99.055 -13.060 1.00 20.80 O
ATOM 4 OP2 A B 541 147.220 98.389 -15.029 1.00 23.09 O
ATOM 5 O5' A B 541 148.611 100.435 -15.186 1.00 24.20 O
ATOM 6 C5' A B 541 147.904 101.537 -14.605 1.00 24.41 C
ATOM 7 C4' A B 541 148.410 102.842 -15.151 1.00 23.46 C
ATOM 8 O4' A B 541 149.736 103.126 -14.676 1.00 22.74 O
ATOM 9 C3' A B 541 148.553 102.930 -16.654 1.00 24.17 C
ATOM 10 O3' A B 541 147.313 103.272 -17.181 1.00 23.47 O
ATOM 11 C2' A B 541 149.537 104.084 -16.848 1.00 24.97 C
ATOM 12 O2' A B 541 148.862 105.305 -17.028 1.00 26.70 O
ATOM 13 C1' A B 541 150.285 104.121 -15.508 1.00 25.66 C
ATOM 14 N9 A B 541 151.741 103.983 -15.540 1.00 27.16 N
ATOM 15 C8 A B 541 152.625 104.671 -14.750 1.00 28.55 C
ATOM 16 N7 A B 541 153.878 104.360 -14.962 1.00 30.28 N
ATOM 17 C5 A B 541 153.814 103.400 -15.960 1.00 30.02 C
ATOM 18 C6 A B 541 154.798 102.664 -16.611 1.00 30.27 C
ATOM 19 N6 A B 541 156.096 102.775 -16.337 1.00 30.11 N
ATOM 20 N1 A B 541 154.404 101.792 -17.564 1.00 31.63 N
ATOM 21 C2 A B 541 153.104 101.675 -17.826 1.00 28.58 C
ATOM 22 N3 A B 541 152.083 102.304 -17.273 1.00 29.78 N
ATOM 23 C4 A B 541 152.507 103.165 -16.333 1.00 29.13 C
ATOM 24 P C B 542 146.755 102.505 -18.468 1.00 25.95 P
ATOM 25 OP1 C B 542 147.110 101.075 -18.316 1.00 27.72 O
ATOM 26 OP2 C B 542 147.150 103.236 -19.700 1.00 27.71 O
ATOM 27 O5' C B 542 145.201 102.629 -18.273 1.00 25.92 O
TER
ATOM 2 P G A 544 144.097 110.503 -13.083 1.00 33.79 P
ATOM 3 OP1 G A 544 143.991 111.838 -13.769 1.00 35.16 O
ATOM 4 OP2 G A 544 144.235 110.422 -11.600 1.00 32.61 O
ATOM 5 O5' G A 544 145.292 109.705 -13.769 1.00 33.23 O
ATOM 6 C5' G A 544 146.517 110.362 -14.142 1.00 29.84 C
ATOM 7 C4' G A 544 147.544 109.332 -14.522 1.00 28.47 C
ATOM 8 O4' G A 544 147.864 108.559 -13.339 1.00 28.12 O
ATOM 9 C3' G A 544 147.075 108.336 -15.582 1.00 27.92 C
ATOM 10 O3' G A 544 148.172 107.956 -16.405 1.00 27.03 O
ATOM 11 C2' G A 544 146.636 107.136 -14.743 1.00 26.89 C
ATOM 12 O2' G A 544 146.787 105.917 -15.416 1.00 28.49 O
ATOM 13 C1' G A 544 147.624 107.189 -13.586 1.00 26.51 C
ATOM 14 N9 G A 544 147.165 106.590 -12.343 1.00 24.42 N
ATOM 15 C8 G A 544 146.223 107.104 -11.494 1.00 24.93 C
ATOM 16 N7 G A 544 146.083 106.406 -10.399 1.00 25.89 N
ATOM 17 C5 G A 544 146.977 105.358 -10.539 1.00 25.11 C
ATOM 18 C6 G A 544 147.298 104.301 -9.647 1.00 25.36 C
ATOM 19 O6 G A 544 146.888 104.105 -8.496 1.00 25.83 O
ATOM 20 N1 G A 544 148.228 103.434 -10.201 1.00 25.69 N
ATOM 21 C2 G A 544 148.811 103.581 -11.428 1.00 23.84 C
ATOM 22 N2 G A 544 149.687 102.624 -11.757 1.00 24.30 N
ATOM 23 N3 G A 544 148.553 104.586 -12.259 1.00 24.12 N
ATOM 24 C4 G A 544 147.628 105.432 -11.752 1.00 25.17 C
ATOM 25 P G A 545 148.690 108.938 -17.575 1.00 27.64 P
ATOM 26 OP1 G A 545 148.212 108.456 -18.920 1.00 26.11 O
ATOM 27 OP2 G A 545 148.427 110.325 -17.158 1.00 29.01 O
ATOM 28 O5' G A 545 150.239 108.705 -17.547 1.00 27.33 O
TER
ATOM 1 O3' C B 540 149.690 98.192 -15.306 1.00 27.18 O
ATOM 2 P A B 541 148.489 98.974 -14.555 1.00 25.58 P
ATOM 3 OP1 A B 541 148.751 99.055 -13.060 1.00 20.80 O
ATOM 4 OP2 A B 541 147.220 98.389 -15.029 1.00 23.09 O
ATOM 5 O5' A B 541 148.611 100.435 -15.186 1.00 24.20 O
ATOM 6 C5' A B 541 147.904 101.537 -14.605 1.00 24.41 C
ATOM 7 C4' A B 541 148.410 102.842 -15.151 1.00 23.46 C
ATOM 8 O4' A B 541 149.736 103.126 -14.676 1.00 22.74 O
ATOM 9 C3' A B 541 148.553 102.930 -16.654 1.00 24.17 C
ATOM 10 O3' A B 541 147.313 103.272 -17.181 1.00 23.47 O
ATOM 11 C2' A B 541 149.537 104.084 -16.848 1.00 24.97 C
ATOM 12 O2' A B 541 148.862 105.305 -17.028 1.00 26.70 O
ATOM 13 C1' A B 541 150.285 104.121 -15.508 1.00 25.66 C
ATOM 14 N9 A B 541 151.741 103.983 -15.540 1.00 27.16 N
ATOM 15 C8 A B 541 152.625 104.671 -14.750 1.00 28.55 C
ATOM 16 N7 A B 541 153.878 104.360 -14.962 1.00 30.28 N
ATOM 17 C5 A B 541 153.814 103.400 -15.960 1.00 30.02 C
ATOM 18 C6 A B 541 154.798 102.664 -16.611 1.00 30.27 C
ATOM 19 N6 A B 541 156.096 102.775 -16.337 1.00 30.11 N
ATOM 20 N1 A B 541 154.404 101.792 -17.564 1.00 31.63 N
ATOM 21 C2 A B 541 153.104 101.675 -17.826 1.00 28.58 C
ATOM 22 N3 A B 541 152.083 102.304 -17.273 1.00 29.78 N
ATOM 23 C4 A B 541 152.507 103.165 -16.333 1.00 29.13 C
ATOM 24 P C B 542 146.755 102.505 -18.468 1.00 25.95 P
ATOM 25 OP1 C B 542 147.110 101.075 -18.316 1.00 27.72 O
ATOM 26 OP2 C B 542 147.150 103.236 -19.700 1.00 27.71 O
ATOM 27 O5' C B 542 145.201 102.629 -18.273 1.00 25.92 O
TER
Atoms:
OP1: (143.991,111.838,-13.769)
OP2: (144.235,110.422,-11.600)
C3': (147.075,108.336,-15.582)
C1': (147.624,107.189,-13.586)
C5': (146.517,110.362,-14.142)
O6: (146.888,104.105,-8.496)
O4': (147.864,108.559,-13.339)
C8: (146.223,107.104,-11.494)
C2: (148.811,103.581,-11.428)
C6: (147.298,104.301,-9.647)
C5: (146.977,105.358,-10.539)
C4: (147.628,105.432,-11.752)
P: (144.097,110.503,-13.083)
C4': (147.544,109.332,-14.522)
C2': (146.636,107.136,-14.743)
O2': (146.787,105.917,-15.416)
N1: (148.228,103.434,-10.201)
N2: (149.687,102.624,-11.757)
N3: (148.553,104.586,-12.259)
N7: (146.083,106.406,-10.399)
N9: (147.165,106.590,-12.343)
O5': (145.292,109.705,-13.769)
O3': (148.172,107.956,-16.405)
OP2: (144.235,110.422,-11.600)
C3': (147.075,108.336,-15.582)
C1': (147.624,107.189,-13.586)
C5': (146.517,110.362,-14.142)
O6: (146.888,104.105,-8.496)
O4': (147.864,108.559,-13.339)
C8: (146.223,107.104,-11.494)
C2: (148.811,103.581,-11.428)
C6: (147.298,104.301,-9.647)
C5: (146.977,105.358,-10.539)
C4: (147.628,105.432,-11.752)
P: (144.097,110.503,-13.083)
C4': (147.544,109.332,-14.522)
C2': (146.636,107.136,-14.743)
O2': (146.787,105.917,-15.416)
N1: (148.228,103.434,-10.201)
N2: (149.687,102.624,-11.757)
N3: (148.553,104.586,-12.259)
N7: (146.083,106.406,-10.399)
N9: (147.165,106.590,-12.343)
O5': (145.292,109.705,-13.769)
O3': (148.172,107.956,-16.405)
OP1: (148.751,99.055,-13.060)
OP2: (147.220,98.389,-15.029)
C3': (148.553,102.930,-16.654)
C1': (150.285,104.121,-15.508)
C5': (147.904,101.537,-14.605)
O4': (149.736,103.126,-14.676)
C8: (152.625,104.671,-14.750)
O2': (148.862,105.305,-17.028)
C6: (154.798,102.664,-16.611)
C5: (153.814,103.400,-15.960)
C4: (152.507,103.165,-16.333)
P: (148.489,98.974,-14.555)
C4': (148.410,102.842,-15.151)
C2': (149.537,104.084,-16.848)
C2: (153.104,101.675,-17.826)
N1: (154.404,101.792,-17.564)
N3: (152.083,102.304,-17.273)
N6: (156.096,102.775,-16.337)
N7: (153.878,104.360,-14.962)
N9: (151.741,103.983,-15.540)
O5': (148.611,100.435,-15.186)
O3': (147.313,103.272,-17.181)
OP2: (147.220,98.389,-15.029)
C3': (148.553,102.930,-16.654)
C1': (150.285,104.121,-15.508)
C5': (147.904,101.537,-14.605)
O4': (149.736,103.126,-14.676)
C8: (152.625,104.671,-14.750)
O2': (148.862,105.305,-17.028)
C6: (154.798,102.664,-16.611)
C5: (153.814,103.400,-15.960)
C4: (152.507,103.165,-16.333)
P: (148.489,98.974,-14.555)
C4': (148.410,102.842,-15.151)
C2': (149.537,104.084,-16.848)
C2: (153.104,101.675,-17.826)
N1: (154.404,101.792,-17.564)
N3: (152.083,102.304,-17.273)
N6: (156.096,102.775,-16.337)
N7: (153.878,104.360,-14.962)
N9: (151.741,103.983,-15.540)
O5': (148.611,100.435,-15.186)
O3': (147.313,103.272,-17.181)
Image (generated by PyMOL):