ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:01080:01207

Extra

PDB:
ATOM 1 O3' U A1079 40.229 101.633 132.752 1.00 41.49 O
ATOM 2 P G A1080 40.146 102.154 131.229 1.00 41.63 P
ATOM 3 OP1 G A1080 41.098 101.320 130.440 1.00 40.92 O
ATOM 4 OP2 G A1080 40.256 103.646 131.196 1.00 35.41 O
ATOM 5 O5' G A1080 38.683 101.729 130.774 1.00 38.59 O
ATOM 6 C5' G A1080 38.272 100.358 130.847 1.00 37.30 C
ATOM 7 C4' G A1080 36.768 100.272 130.825 1.00 38.40 C
ATOM 8 O4' G A1080 36.223 100.996 131.967 1.00 38.29 O
ATOM 9 C3' G A1080 36.068 100.921 129.644 1.00 38.08 C
ATOM 10 O3' G A1080 36.116 100.085 128.490 1.00 38.92 O
ATOM 11 C2' G A1080 34.656 101.072 130.198 1.00 38.04 C
ATOM 12 O2' G A1080 34.011 99.817 130.266 1.00 38.71 O
ATOM 13 C1' G A1080 34.947 101.525 131.631 1.00 37.19 C
ATOM 14 N9 G A1080 35.002 102.979 131.759 1.00 35.27 N
ATOM 15 C8 G A1080 36.130 103.763 131.801 1.00 34.25 C
ATOM 16 N7 G A1080 35.865 105.040 131.895 1.00 34.84 N
ATOM 17 C5 G A1080 34.478 105.103 131.921 1.00 35.15 C
ATOM 18 C6 G A1080 33.614 106.223 132.009 1.00 36.81 C
ATOM 19 O6 G A1080 33.911 107.427 132.079 1.00 40.64 O
ATOM 20 N1 G A1080 32.279 105.840 132.008 1.00 34.15 N
ATOM 21 C2 G A1080 31.830 104.549 131.925 1.00 34.62 C
ATOM 22 N2 G A1080 30.490 104.393 131.933 1.00 35.89 N
ATOM 23 N3 G A1080 32.624 103.491 131.841 1.00 33.08 N
ATOM 24 C4 G A1080 33.928 103.841 131.845 1.00 34.72 C
ATOM 25 P U A1081 35.882 100.717 127.018 1.00 39.87 P
ATOM 26 OP1 U A1081 35.748 99.566 126.076 1.00 38.32 O
ATOM 27 OP2 U A1081 36.890 101.774 126.752 1.00 38.32 O
ATOM 28 O5' U A1081 34.467 101.442 127.108 1.00 39.32 O
TER

ATOM 1 O3' A B1206 25.733 103.029 129.981 1.00 38.58 O
ATOM 2 P A B1207 26.216 101.543 129.573 1.00 40.75 P
ATOM 3 OP1 A B1207 26.619 101.630 128.135 1.00 42.02 O
ATOM 4 OP2 A B1207 25.208 100.535 129.985 1.00 43.43 O
ATOM 5 O5' A B1207 27.531 101.283 130.438 1.00 41.51 O
ATOM 6 C5' A B1207 28.799 101.892 130.085 1.00 41.76 C
ATOM 7 C4' A B1207 29.926 101.242 130.859 1.00 42.11 C
ATOM 8 O4' A B1207 29.756 101.504 132.276 1.00 44.47 O
ATOM 9 C3' A B1207 29.983 99.729 130.754 1.00 42.24 C
ATOM 10 O3' A B1207 30.697 99.338 129.588 1.00 43.32 O
ATOM 11 C2' A B1207 30.688 99.329 132.044 1.00 42.89 C
ATOM 12 O2' A B1207 32.092 99.447 131.993 1.00 42.84 O
ATOM 13 C1' A B1207 30.142 100.367 133.026 1.00 43.08 C
ATOM 14 N9 A B1207 28.980 99.903 133.785 1.00 44.42 N
ATOM 15 C8 A B1207 27.653 100.175 133.554 1.00 45.13 C
ATOM 16 N7 A B1207 26.840 99.609 134.413 1.00 45.99 N
ATOM 17 C5 A B1207 27.688 98.916 135.267 1.00 46.21 C
ATOM 18 C6 A B1207 27.446 98.105 136.399 1.00 47.32 C
ATOM 19 N6 A B1207 26.226 97.840 136.879 1.00 46.12 N
ATOM 20 N1 A B1207 28.517 97.566 137.026 1.00 47.04 N
ATOM 21 C2 A B1207 29.738 97.831 136.546 1.00 46.81 C
ATOM 22 N3 A B1207 30.092 98.577 135.496 1.00 45.83 N
ATOM 23 C4 A B1207 29.008 99.093 134.893 1.00 44.89 C
ATOM 24 P U B1208 30.323 97.966 128.842 1.00 43.04 P
ATOM 25 OP1 U B1208 31.215 97.835 127.664 1.00 46.44 O
ATOM 26 OP2 U B1208 28.855 97.897 128.654 1.00 44.37 O
ATOM 27 O5' U B1208 30.738 96.849 129.894 1.00 44.67 O
TER

Atoms:
OP1: (41.098,101.320,130.440)
OP2: (40.256,103.646,131.196)
C3': (36.068,100.921,129.644)
C1': (34.947,101.525,131.631)
C5': (38.272,100.358,130.847)
O6: (33.911,107.427,132.079)
O4': (36.223,100.996,131.967)
C8: (36.130,103.763,131.801)
C2: (31.830,104.549,131.925)
C6: (33.614,106.223,132.009)
C5: (34.478,105.103,131.921)
C4: (33.928,103.841,131.845)
P: (40.146,102.154,131.229)
C4': (36.768,100.272,130.825)
C2': (34.656,101.072,130.198)
O2': (34.011,99.817,130.266)
N1: (32.279,105.840,132.008)
N2: (30.490,104.393,131.933)
N3: (32.624,103.491,131.841)
N7: (35.865,105.040,131.895)
N9: (35.002,102.979,131.759)
O5': (38.683,101.729,130.774)
O3': (36.116,100.085,128.490)
OP1: (26.619,101.630,128.135)
OP2: (25.208,100.535,129.985)
C3': (29.983,99.729,130.754)
C1': (30.142,100.367,133.026)
C5': (28.799,101.892,130.085)
O4': (29.756,101.504,132.276)
C8: (27.653,100.175,133.554)
O2': (32.092,99.447,131.993)
C6: (27.446,98.105,136.399)
C5: (27.688,98.916,135.267)
C4: (29.008,99.093,134.893)
P: (26.216,101.543,129.573)
C4': (29.926,101.242,130.859)
C2': (30.688,99.329,132.044)
C2: (29.738,97.831,136.546)
N1: (28.517,97.566,137.026)
N3: (30.092,98.577,135.496)
N6: (26.226,97.840,136.879)
N7: (26.840,99.609,134.413)
N9: (28.980,99.903,133.785)
O5': (27.531,101.283,130.438)
O3': (30.697,99.338,129.588)
Image (generated by PyMOL):
PyMOL image
show in jmol