Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1017:A1137
Extra
PDB:
ATOM 1 O3' U A1016 -84.016 104.765 182.064 1.00 5.25 O
ATOM 2 P G A1017 -83.054 106.014 182.359 1.00 0.40 P
ATOM 3 OP1 G A1017 -83.259 107.002 181.247 1.00 0.40 O
ATOM 4 OP2 G A1017 -81.684 105.473 182.616 1.00 0.40 O
ATOM 5 O5' G A1017 -83.673 106.592 183.689 1.00 0.40 O
ATOM 6 C5' G A1017 -84.970 107.144 183.677 1.00 0.40 C
ATOM 7 C4' G A1017 -85.326 107.648 185.025 1.00 0.40 C
ATOM 8 O4' G A1017 -85.489 106.528 185.930 1.00 0.40 O
ATOM 9 C3' G A1017 -84.270 108.516 185.670 1.00 0.40 C
ATOM 10 O3' G A1017 -84.362 109.869 185.228 1.00 0.40 O
ATOM 11 C2' G A1017 -84.546 108.315 187.154 1.00 0.40 C
ATOM 12 O2' G A1017 -85.655 109.102 187.563 1.00 0.40 O
ATOM 13 C1' G A1017 -84.974 106.849 187.191 1.00 0.40 C
ATOM 14 N9 G A1017 -83.861 105.931 187.475 1.00 0.32 N
ATOM 15 C8 G A1017 -83.047 105.306 186.555 1.00 0.32 C
ATOM 16 N7 G A1017 -82.161 104.502 187.097 1.00 0.32 N
ATOM 17 C5 G A1017 -82.431 104.598 188.449 1.00 0.32 C
ATOM 18 C6 G A1017 -81.807 103.968 189.536 1.00 0.32 C
ATOM 19 O6 G A1017 -80.862 103.178 189.542 1.00 0.32 O
ATOM 20 N1 G A1017 -82.398 104.324 190.731 1.00 0.32 N
ATOM 21 C2 G A1017 -83.440 105.178 190.887 1.00 0.32 C
ATOM 22 N2 G A1017 -83.823 105.358 192.155 1.00 0.32 N
ATOM 23 N3 G A1017 -84.035 105.794 189.892 1.00 0.32 N
ATOM 24 C4 G A1017 -83.484 105.453 188.707 1.00 0.32 C
ATOM 25 P G A1018 -83.183 110.934 185.514 1.00 5.48 P
ATOM 26 OP1 G A1018 -83.259 111.303 186.951 1.00 5.48 O
ATOM 27 OP2 G A1018 -83.321 111.998 184.510 1.00 5.48 O
ATOM 28 O5' G A1018 -81.857 110.098 185.248 1.00 5.48 O
TER
ATOM 1 O3' A B1136 -85.175 108.463 196.262 1.00 2.92 O
ATOM 2 P A B1137 -86.082 109.608 195.587 1.00 7.08 P
ATOM 3 OP1 A B1137 -85.233 110.820 195.471 1.00 7.08 O
ATOM 4 OP2 A B1137 -87.341 109.678 196.373 1.00 7.08 O
ATOM 5 O5' A B1137 -86.403 109.036 194.137 1.00 7.08 O
ATOM 6 C5' A B1137 -85.386 108.839 193.175 1.00 7.08 C
ATOM 7 C4' A B1137 -85.953 108.247 191.905 1.00 7.08 C
ATOM 8 O4' A B1137 -86.409 106.900 192.156 1.00 7.08 O
ATOM 9 C3' A B1137 -87.177 108.950 191.321 1.00 7.08 C
ATOM 10 O3' A B1137 -86.843 110.058 190.524 1.00 7.08 O
ATOM 11 C2' A B1137 -87.855 107.855 190.538 1.00 7.08 C
ATOM 12 O2' A B1137 -87.216 107.677 189.287 1.00 7.08 O
ATOM 13 C1' A B1137 -87.566 106.638 191.400 1.00 7.08 C
ATOM 14 N9 A B1137 -88.663 106.317 192.328 1.00 7.09 N
ATOM 15 C8 A B1137 -88.576 106.446 193.685 1.00 7.09 C
ATOM 16 N7 A B1137 -89.639 106.019 194.311 1.00 7.09 N
ATOM 17 C5 A B1137 -90.480 105.548 193.306 1.00 7.09 C
ATOM 18 C6 A B1137 -91.754 104.974 193.335 1.00 7.09 C
ATOM 19 N6 A B1137 -92.453 104.759 194.435 1.00 7.09 N
ATOM 20 N1 A B1137 -92.310 104.622 192.180 1.00 7.09 N
ATOM 21 C2 A B1137 -91.632 104.819 191.055 1.00 7.09 C
ATOM 22 N3 A B1137 -90.430 105.356 190.896 1.00 7.09 N
ATOM 23 C4 A B1137 -89.890 105.717 192.076 1.00 7.09 C
ATOM 24 P C B1138 -87.563 111.449 190.780 1.00 10.71 P
ATOM 25 OP1 C B1138 -86.810 112.483 190.038 1.00 10.71 O
ATOM 26 OP2 C B1138 -87.707 111.593 192.250 1.00 10.71 O
ATOM 27 O5' C B1138 -88.974 111.219 190.107 1.00 10.71 O
TER
ATOM 2 P G A1017 -83.054 106.014 182.359 1.00 0.40 P
ATOM 3 OP1 G A1017 -83.259 107.002 181.247 1.00 0.40 O
ATOM 4 OP2 G A1017 -81.684 105.473 182.616 1.00 0.40 O
ATOM 5 O5' G A1017 -83.673 106.592 183.689 1.00 0.40 O
ATOM 6 C5' G A1017 -84.970 107.144 183.677 1.00 0.40 C
ATOM 7 C4' G A1017 -85.326 107.648 185.025 1.00 0.40 C
ATOM 8 O4' G A1017 -85.489 106.528 185.930 1.00 0.40 O
ATOM 9 C3' G A1017 -84.270 108.516 185.670 1.00 0.40 C
ATOM 10 O3' G A1017 -84.362 109.869 185.228 1.00 0.40 O
ATOM 11 C2' G A1017 -84.546 108.315 187.154 1.00 0.40 C
ATOM 12 O2' G A1017 -85.655 109.102 187.563 1.00 0.40 O
ATOM 13 C1' G A1017 -84.974 106.849 187.191 1.00 0.40 C
ATOM 14 N9 G A1017 -83.861 105.931 187.475 1.00 0.32 N
ATOM 15 C8 G A1017 -83.047 105.306 186.555 1.00 0.32 C
ATOM 16 N7 G A1017 -82.161 104.502 187.097 1.00 0.32 N
ATOM 17 C5 G A1017 -82.431 104.598 188.449 1.00 0.32 C
ATOM 18 C6 G A1017 -81.807 103.968 189.536 1.00 0.32 C
ATOM 19 O6 G A1017 -80.862 103.178 189.542 1.00 0.32 O
ATOM 20 N1 G A1017 -82.398 104.324 190.731 1.00 0.32 N
ATOM 21 C2 G A1017 -83.440 105.178 190.887 1.00 0.32 C
ATOM 22 N2 G A1017 -83.823 105.358 192.155 1.00 0.32 N
ATOM 23 N3 G A1017 -84.035 105.794 189.892 1.00 0.32 N
ATOM 24 C4 G A1017 -83.484 105.453 188.707 1.00 0.32 C
ATOM 25 P G A1018 -83.183 110.934 185.514 1.00 5.48 P
ATOM 26 OP1 G A1018 -83.259 111.303 186.951 1.00 5.48 O
ATOM 27 OP2 G A1018 -83.321 111.998 184.510 1.00 5.48 O
ATOM 28 O5' G A1018 -81.857 110.098 185.248 1.00 5.48 O
TER
ATOM 1 O3' A B1136 -85.175 108.463 196.262 1.00 2.92 O
ATOM 2 P A B1137 -86.082 109.608 195.587 1.00 7.08 P
ATOM 3 OP1 A B1137 -85.233 110.820 195.471 1.00 7.08 O
ATOM 4 OP2 A B1137 -87.341 109.678 196.373 1.00 7.08 O
ATOM 5 O5' A B1137 -86.403 109.036 194.137 1.00 7.08 O
ATOM 6 C5' A B1137 -85.386 108.839 193.175 1.00 7.08 C
ATOM 7 C4' A B1137 -85.953 108.247 191.905 1.00 7.08 C
ATOM 8 O4' A B1137 -86.409 106.900 192.156 1.00 7.08 O
ATOM 9 C3' A B1137 -87.177 108.950 191.321 1.00 7.08 C
ATOM 10 O3' A B1137 -86.843 110.058 190.524 1.00 7.08 O
ATOM 11 C2' A B1137 -87.855 107.855 190.538 1.00 7.08 C
ATOM 12 O2' A B1137 -87.216 107.677 189.287 1.00 7.08 O
ATOM 13 C1' A B1137 -87.566 106.638 191.400 1.00 7.08 C
ATOM 14 N9 A B1137 -88.663 106.317 192.328 1.00 7.09 N
ATOM 15 C8 A B1137 -88.576 106.446 193.685 1.00 7.09 C
ATOM 16 N7 A B1137 -89.639 106.019 194.311 1.00 7.09 N
ATOM 17 C5 A B1137 -90.480 105.548 193.306 1.00 7.09 C
ATOM 18 C6 A B1137 -91.754 104.974 193.335 1.00 7.09 C
ATOM 19 N6 A B1137 -92.453 104.759 194.435 1.00 7.09 N
ATOM 20 N1 A B1137 -92.310 104.622 192.180 1.00 7.09 N
ATOM 21 C2 A B1137 -91.632 104.819 191.055 1.00 7.09 C
ATOM 22 N3 A B1137 -90.430 105.356 190.896 1.00 7.09 N
ATOM 23 C4 A B1137 -89.890 105.717 192.076 1.00 7.09 C
ATOM 24 P C B1138 -87.563 111.449 190.780 1.00 10.71 P
ATOM 25 OP1 C B1138 -86.810 112.483 190.038 1.00 10.71 O
ATOM 26 OP2 C B1138 -87.707 111.593 192.250 1.00 10.71 O
ATOM 27 O5' C B1138 -88.974 111.219 190.107 1.00 10.71 O
TER
Atoms:
OP1: (-83.259,107.002,181.247)
OP2: (-81.684,105.473,182.616)
C3': (-84.270,108.516,185.670)
C1': (-84.974,106.849,187.191)
C5': (-84.970,107.144,183.677)
O6: (-80.862,103.178,189.542)
O4': (-85.489,106.528,185.930)
C8: (-83.047,105.306,186.555)
C2: (-83.440,105.178,190.887)
C6: (-81.807,103.968,189.536)
C5: (-82.431,104.598,188.449)
C4: (-83.484,105.453,188.707)
P: (-83.054,106.014,182.359)
C4': (-85.326,107.648,185.025)
C2': (-84.546,108.315,187.154)
O2': (-85.655,109.102,187.563)
N1: (-82.398,104.324,190.731)
N2: (-83.823,105.358,192.155)
N3: (-84.035,105.794,189.892)
N7: (-82.161,104.502,187.097)
N9: (-83.861,105.931,187.475)
O5': (-83.673,106.592,183.689)
O3': (-84.362,109.869,185.228)
OP2: (-81.684,105.473,182.616)
C3': (-84.270,108.516,185.670)
C1': (-84.974,106.849,187.191)
C5': (-84.970,107.144,183.677)
O6: (-80.862,103.178,189.542)
O4': (-85.489,106.528,185.930)
C8: (-83.047,105.306,186.555)
C2: (-83.440,105.178,190.887)
C6: (-81.807,103.968,189.536)
C5: (-82.431,104.598,188.449)
C4: (-83.484,105.453,188.707)
P: (-83.054,106.014,182.359)
C4': (-85.326,107.648,185.025)
C2': (-84.546,108.315,187.154)
O2': (-85.655,109.102,187.563)
N1: (-82.398,104.324,190.731)
N2: (-83.823,105.358,192.155)
N3: (-84.035,105.794,189.892)
N7: (-82.161,104.502,187.097)
N9: (-83.861,105.931,187.475)
O5': (-83.673,106.592,183.689)
O3': (-84.362,109.869,185.228)
OP1: (-85.233,110.820,195.471)
OP2: (-87.341,109.678,196.373)
C3': (-87.177,108.950,191.321)
C1': (-87.566,106.638,191.400)
C5': (-85.386,108.839,193.175)
O4': (-86.409,106.900,192.156)
C8: (-88.576,106.446,193.685)
O2': (-87.216,107.677,189.287)
C6: (-91.754,104.974,193.335)
C5: (-90.480,105.548,193.306)
C4: (-89.890,105.717,192.076)
P: (-86.082,109.608,195.587)
C4': (-85.953,108.247,191.905)
C2': (-87.855,107.855,190.538)
C2: (-91.632,104.819,191.055)
N1: (-92.310,104.622,192.180)
N3: (-90.430,105.356,190.896)
N6: (-92.453,104.759,194.435)
N7: (-89.639,106.019,194.311)
N9: (-88.663,106.317,192.328)
O5': (-86.403,109.036,194.137)
O3': (-86.843,110.058,190.524)
OP2: (-87.341,109.678,196.373)
C3': (-87.177,108.950,191.321)
C1': (-87.566,106.638,191.400)
C5': (-85.386,108.839,193.175)
O4': (-86.409,106.900,192.156)
C8: (-88.576,106.446,193.685)
O2': (-87.216,107.677,189.287)
C6: (-91.754,104.974,193.335)
C5: (-90.480,105.548,193.306)
C4: (-89.890,105.717,192.076)
P: (-86.082,109.608,195.587)
C4': (-85.953,108.247,191.905)
C2': (-87.855,107.855,190.538)
C2: (-91.632,104.819,191.055)
N1: (-92.310,104.622,192.180)
N3: (-90.430,105.356,190.896)
N6: (-92.453,104.759,194.435)
N7: (-89.639,106.019,194.311)
N9: (-88.663,106.317,192.328)
O5': (-86.403,109.036,194.137)
O3': (-86.843,110.058,190.524)
Image (generated by PyMOL):