Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01080:01207
Extra
PDB:
ATOM 1 O3' U A1079 39.505 102.618 132.772 1.00 46.01 O
ATOM 2 P G A1080 39.396 103.241 131.294 1.00 42.14 P
ATOM 3 OP1 G A1080 40.474 102.585 130.526 1.00 45.60 O
ATOM 4 OP2 G A1080 39.350 104.716 131.373 1.00 38.28 O
ATOM 5 O5' G A1080 38.000 102.691 130.763 1.00 43.04 O
ATOM 6 C5' G A1080 37.673 101.287 130.867 1.00 42.20 C
ATOM 7 C4' G A1080 36.176 101.096 130.872 1.00 43.67 C
ATOM 8 O4' G A1080 35.595 101.731 132.048 1.00 45.58 O
ATOM 9 C3' G A1080 35.443 101.747 129.715 1.00 43.33 C
ATOM 10 O3' G A1080 35.499 100.937 128.558 1.00 44.35 O
ATOM 11 C2' G A1080 34.034 101.887 130.270 1.00 42.62 C
ATOM 12 O2' G A1080 33.341 100.662 130.274 1.00 44.53 O
ATOM 13 C1' G A1080 34.328 102.288 131.714 1.00 43.01 C
ATOM 14 N9 G A1080 34.421 103.736 131.833 1.00 41.19 N
ATOM 15 C8 G A1080 35.568 104.490 131.872 1.00 42.35 C
ATOM 16 N7 G A1080 35.336 105.772 131.948 1.00 43.55 N
ATOM 17 C5 G A1080 33.951 105.870 131.967 1.00 40.19 C
ATOM 18 C6 G A1080 33.120 107.006 132.041 1.00 39.79 C
ATOM 19 O6 G A1080 33.450 108.200 132.110 1.00 38.82 O
ATOM 20 N1 G A1080 31.776 106.654 132.032 1.00 38.74 N
ATOM 21 C2 G A1080 31.296 105.371 131.960 1.00 39.73 C
ATOM 22 N2 G A1080 29.960 105.231 131.967 1.00 39.38 N
ATOM 23 N3 G A1080 32.065 104.303 131.890 1.00 40.61 N
ATOM 24 C4 G A1080 33.372 104.623 131.901 1.00 40.73 C
ATOM 25 P U A1081 35.397 101.617 127.107 1.00 46.33 P
ATOM 26 OP1 U A1081 35.386 100.504 126.118 1.00 46.85 O
ATOM 27 OP2 U A1081 36.417 102.689 127.002 1.00 42.30 O
ATOM 28 O5' U A1081 33.969 102.317 127.099 1.00 45.03 O
TER
ATOM 1 O3' A B1206 25.069 103.971 129.951 1.00 45.93 O
ATOM 2 P A B1207 25.504 102.487 129.508 1.00 51.08 P
ATOM 3 OP1 A B1207 25.885 102.557 128.075 1.00 51.40 O
ATOM 4 OP2 A B1207 24.457 101.521 129.933 1.00 49.27 O
ATOM 5 O5' A B1207 26.830 102.198 130.346 1.00 50.80 O
ATOM 6 C5' A B1207 28.081 102.832 130.004 1.00 53.70 C
ATOM 7 C4' A B1207 29.217 102.199 130.770 1.00 54.67 C
ATOM 8 O4' A B1207 29.058 102.484 132.182 1.00 55.68 O
ATOM 9 C3' A B1207 29.295 100.681 130.686 1.00 54.48 C
ATOM 10 O3' A B1207 30.006 100.268 129.518 1.00 54.78 O
ATOM 11 C2' A B1207 30.030 100.325 131.970 1.00 54.10 C
ATOM 12 O2' A B1207 31.414 100.546 131.870 1.00 54.51 O
ATOM 13 C1' A B1207 29.455 101.355 132.945 1.00 56.26 C
ATOM 14 N9 A B1207 28.288 100.863 133.676 1.00 57.49 N
ATOM 15 C8 A B1207 26.962 101.091 133.399 1.00 58.74 C
ATOM 16 N7 A B1207 26.139 100.490 134.220 1.00 59.55 N
ATOM 17 C5 A B1207 26.978 99.824 135.104 1.00 60.30 C
ATOM 18 C6 A B1207 26.721 98.995 136.214 1.00 59.50 C
ATOM 19 N6 A B1207 25.496 98.679 136.635 1.00 57.03 N
ATOM 20 N1 A B1207 27.784 98.493 136.881 1.00 60.29 N
ATOM 21 C2 A B1207 29.013 98.807 136.455 1.00 60.47 C
ATOM 22 N3 A B1207 29.382 99.572 135.427 1.00 59.76 N
ATOM 23 C4 A B1207 28.305 100.053 134.784 1.00 59.17 C
ATOM 24 P U B1208 29.734 98.816 128.884 1.00 54.27 P
ATOM 25 OP1 U B1208 30.686 98.576 127.774 1.00 54.98 O
ATOM 26 OP2 U B1208 28.286 98.697 128.635 1.00 54.22 O
ATOM 27 O5' U B1208 30.103 97.809 130.056 1.00 55.28 O
TER
ATOM 2 P G A1080 39.396 103.241 131.294 1.00 42.14 P
ATOM 3 OP1 G A1080 40.474 102.585 130.526 1.00 45.60 O
ATOM 4 OP2 G A1080 39.350 104.716 131.373 1.00 38.28 O
ATOM 5 O5' G A1080 38.000 102.691 130.763 1.00 43.04 O
ATOM 6 C5' G A1080 37.673 101.287 130.867 1.00 42.20 C
ATOM 7 C4' G A1080 36.176 101.096 130.872 1.00 43.67 C
ATOM 8 O4' G A1080 35.595 101.731 132.048 1.00 45.58 O
ATOM 9 C3' G A1080 35.443 101.747 129.715 1.00 43.33 C
ATOM 10 O3' G A1080 35.499 100.937 128.558 1.00 44.35 O
ATOM 11 C2' G A1080 34.034 101.887 130.270 1.00 42.62 C
ATOM 12 O2' G A1080 33.341 100.662 130.274 1.00 44.53 O
ATOM 13 C1' G A1080 34.328 102.288 131.714 1.00 43.01 C
ATOM 14 N9 G A1080 34.421 103.736 131.833 1.00 41.19 N
ATOM 15 C8 G A1080 35.568 104.490 131.872 1.00 42.35 C
ATOM 16 N7 G A1080 35.336 105.772 131.948 1.00 43.55 N
ATOM 17 C5 G A1080 33.951 105.870 131.967 1.00 40.19 C
ATOM 18 C6 G A1080 33.120 107.006 132.041 1.00 39.79 C
ATOM 19 O6 G A1080 33.450 108.200 132.110 1.00 38.82 O
ATOM 20 N1 G A1080 31.776 106.654 132.032 1.00 38.74 N
ATOM 21 C2 G A1080 31.296 105.371 131.960 1.00 39.73 C
ATOM 22 N2 G A1080 29.960 105.231 131.967 1.00 39.38 N
ATOM 23 N3 G A1080 32.065 104.303 131.890 1.00 40.61 N
ATOM 24 C4 G A1080 33.372 104.623 131.901 1.00 40.73 C
ATOM 25 P U A1081 35.397 101.617 127.107 1.00 46.33 P
ATOM 26 OP1 U A1081 35.386 100.504 126.118 1.00 46.85 O
ATOM 27 OP2 U A1081 36.417 102.689 127.002 1.00 42.30 O
ATOM 28 O5' U A1081 33.969 102.317 127.099 1.00 45.03 O
TER
ATOM 1 O3' A B1206 25.069 103.971 129.951 1.00 45.93 O
ATOM 2 P A B1207 25.504 102.487 129.508 1.00 51.08 P
ATOM 3 OP1 A B1207 25.885 102.557 128.075 1.00 51.40 O
ATOM 4 OP2 A B1207 24.457 101.521 129.933 1.00 49.27 O
ATOM 5 O5' A B1207 26.830 102.198 130.346 1.00 50.80 O
ATOM 6 C5' A B1207 28.081 102.832 130.004 1.00 53.70 C
ATOM 7 C4' A B1207 29.217 102.199 130.770 1.00 54.67 C
ATOM 8 O4' A B1207 29.058 102.484 132.182 1.00 55.68 O
ATOM 9 C3' A B1207 29.295 100.681 130.686 1.00 54.48 C
ATOM 10 O3' A B1207 30.006 100.268 129.518 1.00 54.78 O
ATOM 11 C2' A B1207 30.030 100.325 131.970 1.00 54.10 C
ATOM 12 O2' A B1207 31.414 100.546 131.870 1.00 54.51 O
ATOM 13 C1' A B1207 29.455 101.355 132.945 1.00 56.26 C
ATOM 14 N9 A B1207 28.288 100.863 133.676 1.00 57.49 N
ATOM 15 C8 A B1207 26.962 101.091 133.399 1.00 58.74 C
ATOM 16 N7 A B1207 26.139 100.490 134.220 1.00 59.55 N
ATOM 17 C5 A B1207 26.978 99.824 135.104 1.00 60.30 C
ATOM 18 C6 A B1207 26.721 98.995 136.214 1.00 59.50 C
ATOM 19 N6 A B1207 25.496 98.679 136.635 1.00 57.03 N
ATOM 20 N1 A B1207 27.784 98.493 136.881 1.00 60.29 N
ATOM 21 C2 A B1207 29.013 98.807 136.455 1.00 60.47 C
ATOM 22 N3 A B1207 29.382 99.572 135.427 1.00 59.76 N
ATOM 23 C4 A B1207 28.305 100.053 134.784 1.00 59.17 C
ATOM 24 P U B1208 29.734 98.816 128.884 1.00 54.27 P
ATOM 25 OP1 U B1208 30.686 98.576 127.774 1.00 54.98 O
ATOM 26 OP2 U B1208 28.286 98.697 128.635 1.00 54.22 O
ATOM 27 O5' U B1208 30.103 97.809 130.056 1.00 55.28 O
TER
Atoms:
OP1: (40.474,102.585,130.526)
OP2: (39.350,104.716,131.373)
C3': (35.443,101.747,129.715)
C1': (34.328,102.288,131.714)
C5': (37.673,101.287,130.867)
O6: (33.450,108.200,132.110)
O4': (35.595,101.731,132.048)
C8: (35.568,104.490,131.872)
C2: (31.296,105.371,131.960)
C6: (33.120,107.006,132.041)
C5: (33.951,105.870,131.967)
C4: (33.372,104.623,131.901)
P: (39.396,103.241,131.294)
C4': (36.176,101.096,130.872)
C2': (34.034,101.887,130.270)
O2': (33.341,100.662,130.274)
N1: (31.776,106.654,132.032)
N2: (29.960,105.231,131.967)
N3: (32.065,104.303,131.890)
N7: (35.336,105.772,131.948)
N9: (34.421,103.736,131.833)
O5': (38.000,102.691,130.763)
O3': (35.499,100.937,128.558)
OP2: (39.350,104.716,131.373)
C3': (35.443,101.747,129.715)
C1': (34.328,102.288,131.714)
C5': (37.673,101.287,130.867)
O6: (33.450,108.200,132.110)
O4': (35.595,101.731,132.048)
C8: (35.568,104.490,131.872)
C2: (31.296,105.371,131.960)
C6: (33.120,107.006,132.041)
C5: (33.951,105.870,131.967)
C4: (33.372,104.623,131.901)
P: (39.396,103.241,131.294)
C4': (36.176,101.096,130.872)
C2': (34.034,101.887,130.270)
O2': (33.341,100.662,130.274)
N1: (31.776,106.654,132.032)
N2: (29.960,105.231,131.967)
N3: (32.065,104.303,131.890)
N7: (35.336,105.772,131.948)
N9: (34.421,103.736,131.833)
O5': (38.000,102.691,130.763)
O3': (35.499,100.937,128.558)
OP1: (25.885,102.557,128.075)
OP2: (24.457,101.521,129.933)
C3': (29.295,100.681,130.686)
C1': (29.455,101.355,132.945)
C5': (28.081,102.832,130.004)
O4': (29.058,102.484,132.182)
C8: (26.962,101.091,133.399)
O2': (31.414,100.546,131.870)
C6: (26.721,98.995,136.214)
C5: (26.978,99.824,135.104)
C4: (28.305,100.053,134.784)
P: (25.504,102.487,129.508)
C4': (29.217,102.199,130.770)
C2': (30.030,100.325,131.970)
C2: (29.013,98.807,136.455)
N1: (27.784,98.493,136.881)
N3: (29.382,99.572,135.427)
N6: (25.496,98.679,136.635)
N7: (26.139,100.490,134.220)
N9: (28.288,100.863,133.676)
O5': (26.830,102.198,130.346)
O3': (30.006,100.268,129.518)
OP2: (24.457,101.521,129.933)
C3': (29.295,100.681,130.686)
C1': (29.455,101.355,132.945)
C5': (28.081,102.832,130.004)
O4': (29.058,102.484,132.182)
C8: (26.962,101.091,133.399)
O2': (31.414,100.546,131.870)
C6: (26.721,98.995,136.214)
C5: (26.978,99.824,135.104)
C4: (28.305,100.053,134.784)
P: (25.504,102.487,129.508)
C4': (29.217,102.199,130.770)
C2': (30.030,100.325,131.970)
C2: (29.013,98.807,136.455)
N1: (27.784,98.493,136.881)
N3: (29.382,99.572,135.427)
N6: (25.496,98.679,136.635)
N7: (26.139,100.490,134.220)
N9: (28.288,100.863,133.676)
O5': (26.830,102.198,130.346)
O3': (30.006,100.268,129.518)
Image (generated by PyMOL):