Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1080:A1207
Extra
PDB:
ATOM 1 O3' U A1079 39.907 102.778 133.053 1.00 31.94 O
ATOM 2 P G A1080 39.801 103.385 131.578 1.00 30.52 P
ATOM 3 OP1 G A1080 40.875 102.703 130.842 1.00 31.38 O
ATOM 4 OP2 G A1080 39.811 104.858 131.669 1.00 29.15 O
ATOM 5 O5' G A1080 38.372 102.891 131.075 1.00 30.26 O
ATOM 6 C5' G A1080 38.060 101.487 131.017 1.00 31.53 C
ATOM 7 C4' G A1080 36.568 101.258 130.993 1.00 31.61 C
ATOM 8 O4' G A1080 35.947 101.762 132.197 1.00 32.33 O
ATOM 9 C3' G A1080 35.832 101.936 129.860 1.00 31.02 C
ATOM 10 O3' G A1080 35.903 101.128 128.713 1.00 33.28 O
ATOM 11 C2' G A1080 34.421 102.056 130.405 1.00 31.15 C
ATOM 12 O2' G A1080 33.606 100.913 130.256 1.00 30.91 O
ATOM 13 C1' G A1080 34.708 102.359 131.873 1.00 31.58 C
ATOM 14 N9 G A1080 34.867 103.798 131.968 1.00 30.92 N
ATOM 15 C8 G A1080 36.021 104.546 131.899 1.00 31.82 C
ATOM 16 N7 G A1080 35.796 105.829 131.928 1.00 32.49 N
ATOM 17 C5 G A1080 34.416 105.920 132.039 1.00 32.74 C
ATOM 18 C6 G A1080 33.576 107.047 132.101 1.00 33.00 C
ATOM 19 O6 G A1080 33.890 108.236 132.067 1.00 34.13 O
ATOM 20 N1 G A1080 32.236 106.682 132.202 1.00 32.18 N
ATOM 21 C2 G A1080 31.771 105.396 132.228 1.00 32.99 C
ATOM 22 N2 G A1080 30.450 105.243 132.288 1.00 32.86 N
ATOM 23 N3 G A1080 32.547 104.339 132.184 1.00 32.95 N
ATOM 24 C4 G A1080 33.845 104.672 132.085 1.00 31.80 C
ATOM 25 P U A1081 35.789 101.781 127.262 1.00 34.54 P
ATOM 26 OP1 U A1081 35.797 100.622 126.345 1.00 35.06 O
ATOM 27 OP2 U A1081 36.789 102.838 127.106 1.00 34.78 O
ATOM 28 O5' U A1081 34.358 102.457 127.261 1.00 34.20 O
TER
ATOM 1 O3' A B1206 25.536 104.064 130.149 1.00 33.41 O
ATOM 2 P A B1207 26.010 102.606 129.681 1.00 32.83 P
ATOM 3 OP1 A B1207 26.370 102.686 128.254 1.00 32.45 O
ATOM 4 OP2 A B1207 24.992 101.630 130.121 1.00 34.20 O
ATOM 5 O5' A B1207 27.356 102.352 130.497 1.00 34.18 O
ATOM 6 C5' A B1207 28.613 102.946 130.108 1.00 35.48 C
ATOM 7 C4' A B1207 29.734 102.370 130.936 1.00 35.09 C
ATOM 8 O4' A B1207 29.446 102.619 132.332 1.00 34.57 O
ATOM 9 C3' A B1207 29.883 100.862 130.852 1.00 35.36 C
ATOM 10 O3' A B1207 30.656 100.455 129.730 1.00 33.67 O
ATOM 11 C2' A B1207 30.537 100.511 132.181 1.00 37.43 C
ATOM 12 O2' A B1207 31.925 100.752 132.188 1.00 38.45 O
ATOM 13 C1' A B1207 29.863 101.513 133.118 1.00 37.90 C
ATOM 14 N9 A B1207 28.706 100.997 133.864 1.00 40.01 N
ATOM 15 C8 A B1207 27.382 101.306 133.678 1.00 39.53 C
ATOM 16 N7 A B1207 26.580 100.737 134.542 1.00 40.05 N
ATOM 17 C5 A B1207 27.428 99.993 135.349 1.00 40.89 C
ATOM 18 C6 A B1207 27.195 99.169 136.467 1.00 41.97 C
ATOM 19 N6 A B1207 25.990 98.978 137.008 1.00 41.98 N
ATOM 20 N1 A B1207 28.258 98.548 137.023 1.00 42.21 N
ATOM 21 C2 A B1207 29.468 98.758 136.495 1.00 41.42 C
ATOM 22 N3 A B1207 29.816 99.521 135.463 1.00 41.16 N
ATOM 23 C4 A B1207 28.738 100.122 134.928 1.00 40.67 C
ATOM 24 P U B1208 30.317 99.074 128.999 1.00 34.24 P
ATOM 25 OP1 U B1208 31.240 98.956 127.845 1.00 36.26 O
ATOM 26 OP2 U B1208 28.872 99.027 128.768 1.00 37.44 O
ATOM 27 O5' U B1208 30.604 97.946 130.092 1.00 37.31 O
TER
ATOM 2 P G A1080 39.801 103.385 131.578 1.00 30.52 P
ATOM 3 OP1 G A1080 40.875 102.703 130.842 1.00 31.38 O
ATOM 4 OP2 G A1080 39.811 104.858 131.669 1.00 29.15 O
ATOM 5 O5' G A1080 38.372 102.891 131.075 1.00 30.26 O
ATOM 6 C5' G A1080 38.060 101.487 131.017 1.00 31.53 C
ATOM 7 C4' G A1080 36.568 101.258 130.993 1.00 31.61 C
ATOM 8 O4' G A1080 35.947 101.762 132.197 1.00 32.33 O
ATOM 9 C3' G A1080 35.832 101.936 129.860 1.00 31.02 C
ATOM 10 O3' G A1080 35.903 101.128 128.713 1.00 33.28 O
ATOM 11 C2' G A1080 34.421 102.056 130.405 1.00 31.15 C
ATOM 12 O2' G A1080 33.606 100.913 130.256 1.00 30.91 O
ATOM 13 C1' G A1080 34.708 102.359 131.873 1.00 31.58 C
ATOM 14 N9 G A1080 34.867 103.798 131.968 1.00 30.92 N
ATOM 15 C8 G A1080 36.021 104.546 131.899 1.00 31.82 C
ATOM 16 N7 G A1080 35.796 105.829 131.928 1.00 32.49 N
ATOM 17 C5 G A1080 34.416 105.920 132.039 1.00 32.74 C
ATOM 18 C6 G A1080 33.576 107.047 132.101 1.00 33.00 C
ATOM 19 O6 G A1080 33.890 108.236 132.067 1.00 34.13 O
ATOM 20 N1 G A1080 32.236 106.682 132.202 1.00 32.18 N
ATOM 21 C2 G A1080 31.771 105.396 132.228 1.00 32.99 C
ATOM 22 N2 G A1080 30.450 105.243 132.288 1.00 32.86 N
ATOM 23 N3 G A1080 32.547 104.339 132.184 1.00 32.95 N
ATOM 24 C4 G A1080 33.845 104.672 132.085 1.00 31.80 C
ATOM 25 P U A1081 35.789 101.781 127.262 1.00 34.54 P
ATOM 26 OP1 U A1081 35.797 100.622 126.345 1.00 35.06 O
ATOM 27 OP2 U A1081 36.789 102.838 127.106 1.00 34.78 O
ATOM 28 O5' U A1081 34.358 102.457 127.261 1.00 34.20 O
TER
ATOM 1 O3' A B1206 25.536 104.064 130.149 1.00 33.41 O
ATOM 2 P A B1207 26.010 102.606 129.681 1.00 32.83 P
ATOM 3 OP1 A B1207 26.370 102.686 128.254 1.00 32.45 O
ATOM 4 OP2 A B1207 24.992 101.630 130.121 1.00 34.20 O
ATOM 5 O5' A B1207 27.356 102.352 130.497 1.00 34.18 O
ATOM 6 C5' A B1207 28.613 102.946 130.108 1.00 35.48 C
ATOM 7 C4' A B1207 29.734 102.370 130.936 1.00 35.09 C
ATOM 8 O4' A B1207 29.446 102.619 132.332 1.00 34.57 O
ATOM 9 C3' A B1207 29.883 100.862 130.852 1.00 35.36 C
ATOM 10 O3' A B1207 30.656 100.455 129.730 1.00 33.67 O
ATOM 11 C2' A B1207 30.537 100.511 132.181 1.00 37.43 C
ATOM 12 O2' A B1207 31.925 100.752 132.188 1.00 38.45 O
ATOM 13 C1' A B1207 29.863 101.513 133.118 1.00 37.90 C
ATOM 14 N9 A B1207 28.706 100.997 133.864 1.00 40.01 N
ATOM 15 C8 A B1207 27.382 101.306 133.678 1.00 39.53 C
ATOM 16 N7 A B1207 26.580 100.737 134.542 1.00 40.05 N
ATOM 17 C5 A B1207 27.428 99.993 135.349 1.00 40.89 C
ATOM 18 C6 A B1207 27.195 99.169 136.467 1.00 41.97 C
ATOM 19 N6 A B1207 25.990 98.978 137.008 1.00 41.98 N
ATOM 20 N1 A B1207 28.258 98.548 137.023 1.00 42.21 N
ATOM 21 C2 A B1207 29.468 98.758 136.495 1.00 41.42 C
ATOM 22 N3 A B1207 29.816 99.521 135.463 1.00 41.16 N
ATOM 23 C4 A B1207 28.738 100.122 134.928 1.00 40.67 C
ATOM 24 P U B1208 30.317 99.074 128.999 1.00 34.24 P
ATOM 25 OP1 U B1208 31.240 98.956 127.845 1.00 36.26 O
ATOM 26 OP2 U B1208 28.872 99.027 128.768 1.00 37.44 O
ATOM 27 O5' U B1208 30.604 97.946 130.092 1.00 37.31 O
TER
Atoms:
OP1: (40.875,102.703,130.842)
OP2: (39.811,104.858,131.669)
C3': (35.832,101.936,129.860)
C1': (34.708,102.359,131.873)
C5': (38.060,101.487,131.017)
O6: (33.890,108.236,132.067)
O4': (35.947,101.762,132.197)
C8: (36.021,104.546,131.899)
C2: (31.771,105.396,132.228)
C6: (33.576,107.047,132.101)
C5: (34.416,105.920,132.039)
C4: (33.845,104.672,132.085)
P: (39.801,103.385,131.578)
C4': (36.568,101.258,130.993)
C2': (34.421,102.056,130.405)
O2': (33.606,100.913,130.256)
N1: (32.236,106.682,132.202)
N2: (30.450,105.243,132.288)
N3: (32.547,104.339,132.184)
N7: (35.796,105.829,131.928)
N9: (34.867,103.798,131.968)
O5': (38.372,102.891,131.075)
O3': (35.903,101.128,128.713)
OP2: (39.811,104.858,131.669)
C3': (35.832,101.936,129.860)
C1': (34.708,102.359,131.873)
C5': (38.060,101.487,131.017)
O6: (33.890,108.236,132.067)
O4': (35.947,101.762,132.197)
C8: (36.021,104.546,131.899)
C2: (31.771,105.396,132.228)
C6: (33.576,107.047,132.101)
C5: (34.416,105.920,132.039)
C4: (33.845,104.672,132.085)
P: (39.801,103.385,131.578)
C4': (36.568,101.258,130.993)
C2': (34.421,102.056,130.405)
O2': (33.606,100.913,130.256)
N1: (32.236,106.682,132.202)
N2: (30.450,105.243,132.288)
N3: (32.547,104.339,132.184)
N7: (35.796,105.829,131.928)
N9: (34.867,103.798,131.968)
O5': (38.372,102.891,131.075)
O3': (35.903,101.128,128.713)
OP1: (26.370,102.686,128.254)
OP2: (24.992,101.630,130.121)
C3': (29.883,100.862,130.852)
C1': (29.863,101.513,133.118)
C5': (28.613,102.946,130.108)
O4': (29.446,102.619,132.332)
C8: (27.382,101.306,133.678)
O2': (31.925,100.752,132.188)
C6: (27.195,99.169,136.467)
C5: (27.428,99.993,135.349)
C4: (28.738,100.122,134.928)
P: (26.010,102.606,129.681)
C4': (29.734,102.370,130.936)
C2': (30.537,100.511,132.181)
C2: (29.468,98.758,136.495)
N1: (28.258,98.548,137.023)
N3: (29.816,99.521,135.463)
N6: (25.990,98.978,137.008)
N7: (26.580,100.737,134.542)
N9: (28.706,100.997,133.864)
O5': (27.356,102.352,130.497)
O3': (30.656,100.455,129.730)
OP2: (24.992,101.630,130.121)
C3': (29.883,100.862,130.852)
C1': (29.863,101.513,133.118)
C5': (28.613,102.946,130.108)
O4': (29.446,102.619,132.332)
C8: (27.382,101.306,133.678)
O2': (31.925,100.752,132.188)
C6: (27.195,99.169,136.467)
C5: (27.428,99.993,135.349)
C4: (28.738,100.122,134.928)
P: (26.010,102.606,129.681)
C4': (29.734,102.370,130.936)
C2': (30.537,100.511,132.181)
C2: (29.468,98.758,136.495)
N1: (28.258,98.548,137.023)
N3: (29.816,99.521,135.463)
N6: (25.990,98.978,137.008)
N7: (26.580,100.737,134.542)
N9: (28.706,100.997,133.864)
O5': (27.356,102.352,130.497)
O3': (30.656,100.455,129.730)
Image (generated by PyMOL):