ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A768:A766

Extra

PDB:
ATOM 1 O3' U A 767 -57.838 -66.037 5.913 1.00 54.37 O
ATOM 2 P G A 768 -56.509 -66.663 5.312 1.00 53.13 P
ATOM 3 OP1 G A 768 -56.847 -67.741 4.362 1.00 48.93 O
ATOM 4 OP2 G A 768 -55.541 -66.885 6.413 1.00 62.26 O
ATOM 5 O5' G A 768 -55.949 -65.415 4.500 1.00 59.95 O
ATOM 6 C5' G A 768 -56.812 -64.764 3.582 1.00 58.52 C
ATOM 7 C4' G A 768 -56.273 -63.395 3.202 1.00 54.45 C
ATOM 8 O4' G A 768 -56.846 -62.403 4.075 1.00 48.93 O
ATOM 9 C3' G A 768 -54.769 -63.210 3.373 1.00 59.65 C
ATOM 10 O3' G A 768 -54.078 -63.481 2.139 1.00 66.47 O
ATOM 11 C2' G A 768 -54.612 -61.746 3.810 1.00 52.83 C
ATOM 12 O2' G A 768 -53.916 -60.963 2.852 1.00 49.18 O
ATOM 13 C1' G A 768 -56.050 -61.248 3.955 1.00 47.07 C
ATOM 14 N9 G A 768 -56.309 -60.456 5.143 1.00 41.88 N
ATOM 15 C8 G A 768 -55.615 -60.489 6.319 1.00 50.65 C
ATOM 16 N7 G A 768 -56.089 -59.673 7.210 1.00 52.41 N
ATOM 17 C5 G A 768 -57.176 -59.068 6.586 1.00 46.80 C
ATOM 18 C6 G A 768 -58.089 -58.094 7.063 1.00 50.01 C
ATOM 19 O6 G A 768 -58.129 -57.552 8.177 1.00 49.20 O
ATOM 20 N1 G A 768 -59.030 -57.756 6.104 1.00 50.78 N
ATOM 21 C2 G A 768 -59.086 -58.292 4.846 1.00 49.62 C
ATOM 22 N2 G A 768 -60.067 -57.850 4.050 1.00 58.25 N
ATOM 23 N3 G A 768 -58.246 -59.203 4.392 1.00 49.36 N
ATOM 24 C4 G A 768 -57.319 -59.543 5.312 1.00 43.33 C
ATOM 25 P C A 769 -52.694 -64.309 2.148 1.00 56.48 P
ATOM 26 OP1 C A 769 -52.307 -64.505 0.728 1.00 44.54 O
ATOM 27 OP2 C A 769 -52.853 -65.480 3.068 1.00 54.89 O
ATOM 28 O5' C A 769 -51.656 -63.270 2.816 1.00 58.59 O
TER

ATOM 1 O3' G B 765 -57.817 -61.343 -0.614 1.00 34.94 O
ATOM 2 P A B 766 -58.865 -62.532 -0.772 1.00 46.89 P
ATOM 3 OP1 A B 766 -58.097 -63.773 -0.548 1.00 57.00 O
ATOM 4 OP2 A B 766 -59.618 -62.325 -2.038 1.00 44.51 O
ATOM 5 O5' A B 766 -59.871 -62.328 0.447 1.00 33.71 O
ATOM 6 C5' A B 766 -59.343 -62.045 1.717 1.00 39.33 C
ATOM 7 C4' A B 766 -60.399 -61.312 2.517 1.00 50.32 C
ATOM 8 O4' A B 766 -60.726 -60.033 1.908 1.00 43.18 O
ATOM 9 C3' A B 766 -61.717 -62.078 2.624 1.00 53.07 C
ATOM 10 O3' A B 766 -61.876 -62.572 3.949 1.00 47.20 O
ATOM 11 C2' A B 766 -62.804 -61.052 2.330 1.00 50.29 C
ATOM 12 O2' A B 766 -63.789 -61.055 3.349 1.00 54.44 O
ATOM 13 C1' A B 766 -62.035 -59.732 2.348 1.00 51.92 C
ATOM 14 N9 A B 766 -62.681 -58.718 1.517 1.00 51.40 N
ATOM 15 C8 A B 766 -62.972 -58.781 0.185 1.00 50.19 C
ATOM 16 N7 A B 766 -63.584 -57.713 -0.273 1.00 45.19 N
ATOM 17 C5 A B 766 -63.714 -56.900 0.832 1.00 41.71 C
ATOM 18 C6 A B 766 -64.273 -55.627 1.011 1.00 42.01 C
ATOM 19 N6 A B 766 -64.834 -54.906 0.041 1.00 60.17 N
ATOM 20 N1 A B 766 -64.233 -55.097 2.241 1.00 41.56 N
ATOM 21 C2 A B 766 -63.665 -55.805 3.224 1.00 55.64 C
ATOM 22 N3 A B 766 -63.110 -57.014 3.183 1.00 61.75 N
ATOM 23 C4 A B 766 -63.168 -57.506 1.942 1.00 50.22 C
ATOM 24 P U B 767 -62.593 -63.983 4.199 1.00 63.64 P
ATOM 25 OP1 U B 767 -63.154 -64.493 2.917 1.00 60.60 O
ATOM 26 OP2 U B 767 -63.430 -63.830 5.416 1.00 72.61 O
ATOM 27 O5' U B 767 -61.366 -64.910 4.618 1.00 64.74 O
TER

Atoms:
OP1: (-56.847,-67.741,4.362)
OP2: (-55.541,-66.885,6.413)
C3': (-54.769,-63.210,3.373)
C1': (-56.050,-61.248,3.955)
C5': (-56.812,-64.764,3.582)
O6: (-58.129,-57.552,8.177)
O4': (-56.846,-62.403,4.075)
C8: (-55.615,-60.489,6.319)
C2: (-59.086,-58.292,4.846)
C6: (-58.089,-58.094,7.063)
C5: (-57.176,-59.068,6.586)
C4: (-57.319,-59.543,5.312)
P: (-56.509,-66.663,5.312)
C4': (-56.273,-63.395,3.202)
C2': (-54.612,-61.746,3.810)
O2': (-53.916,-60.963,2.852)
N1: (-59.030,-57.756,6.104)
N2: (-60.067,-57.850,4.050)
N3: (-58.246,-59.203,4.392)
N7: (-56.089,-59.673,7.210)
N9: (-56.309,-60.456,5.143)
O5': (-55.949,-65.415,4.500)
O3': (-54.078,-63.481,2.139)
OP1: (-58.097,-63.773,-0.548)
OP2: (-59.618,-62.325,-2.038)
C3': (-61.717,-62.078,2.624)
C1': (-62.035,-59.732,2.348)
C5': (-59.343,-62.045,1.717)
O4': (-60.726,-60.033,1.908)
C8: (-62.972,-58.781,0.185)
O2': (-63.789,-61.055,3.349)
C6: (-64.273,-55.627,1.011)
C5: (-63.714,-56.900,0.832)
C4: (-63.168,-57.506,1.942)
P: (-58.865,-62.532,-0.772)
C4': (-60.399,-61.312,2.517)
C2': (-62.804,-61.052,2.330)
C2: (-63.665,-55.805,3.224)
N1: (-64.233,-55.097,2.241)
N3: (-63.110,-57.014,3.183)
N6: (-64.834,-54.906,0.041)
N7: (-63.584,-57.713,-0.273)
N9: (-62.681,-58.718,1.517)
O5': (-59.871,-62.328,0.447)
O3': (-61.876,-62.572,3.949)
Image (generated by PyMOL):
PyMOL image
show in jmol