Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX6:A20:A35
Extra
PDB:
ATOM 1 O3' A A 19 6.227 -1.975 5.833 1.00 65.08 O
ATOM 2 P G A 20 6.486 -2.835 7.163 1.00 68.24 P
ATOM 3 OP1 G A 20 7.268 -1.994 8.094 1.00 76.96 O
ATOM 4 OP2 G A 20 7.008 -4.160 6.755 1.00 57.70 O
ATOM 5 O5' G A 20 5.031 -3.036 7.789 1.00 65.85 O
ATOM 6 C5' G A 20 4.859 -3.716 9.025 1.00 64.87 C
ATOM 7 C4' G A 20 3.605 -3.174 9.678 1.00 66.20 C
ATOM 8 O4' G A 20 2.681 -2.809 8.621 1.00 65.98 O
ATOM 9 C3' G A 20 2.828 -4.145 10.555 1.00 66.42 C
ATOM 10 O3' G A 20 3.273 -4.099 11.899 1.00 74.87 O
ATOM 11 C2' G A 20 1.426 -3.568 10.422 1.00 66.44 C
ATOM 12 O2' G A 20 1.281 -2.346 11.117 1.00 58.59 O
ATOM 13 C1' G A 20 1.405 -3.337 8.919 1.00 68.70 C
ATOM 14 N9 G A 20 1.207 -4.581 8.179 1.00 65.28 N
ATOM 15 C8 G A 20 2.162 -5.391 7.609 1.00 69.43 C
ATOM 16 N7 G A 20 1.669 -6.447 7.021 1.00 68.40 N
ATOM 17 C5 G A 20 0.298 -6.329 7.216 1.00 66.61 C
ATOM 18 C6 G A 20 -0.760 -7.175 6.805 1.00 67.25 C
ATOM 19 O6 G A 20 -0.694 -8.232 6.163 1.00 67.39 O
ATOM 20 N1 G A 20 -1.998 -6.682 7.213 1.00 65.76 N
ATOM 21 C2 G A 20 -2.188 -5.522 7.927 1.00 62.58 C
ATOM 22 N2 G A 20 -3.454 -5.206 8.230 1.00 62.69 N
ATOM 23 N3 G A 20 -1.208 -4.723 8.318 1.00 57.23 N
ATOM 24 C4 G A 20 0.001 -5.189 7.928 1.00 59.94 C
ATOM 25 P G A 21 3.122 -5.405 12.811 1.00 77.36 P
ATOM 26 OP1 G A 21 3.578 -5.049 14.174 1.00 61.88 O
ATOM 27 OP2 G A 21 3.759 -6.533 12.092 1.00 64.51 O
ATOM 28 O5' G A 21 1.536 -5.641 12.859 1.00 61.12 O
TER
ATOM 1 O3' G B 34 -6.764 2.204 7.126 1.00 68.41 O
ATOM 2 P A B 35 -6.500 2.429 8.691 1.00 68.96 P
ATOM 3 OP1 A B 35 -7.810 2.325 9.375 1.00 57.61 O
ATOM 4 OP2 A B 35 -5.676 3.648 8.850 1.00 68.15 O
ATOM 5 O5' A B 35 -5.619 1.159 9.103 1.00 59.18 O
ATOM 6 C5' A B 35 -6.220 -0.131 9.153 1.00 63.71 C
ATOM 7 C4' A B 35 -5.198 -1.191 9.520 1.00 61.78 C
ATOM 8 O4' A B 35 -4.208 -1.292 8.466 1.00 66.43 O
ATOM 9 C3' A B 35 -4.398 -0.888 10.778 1.00 64.91 C
ATOM 10 O3' A B 35 -5.050 -1.414 11.915 1.00 60.19 O
ATOM 11 C2' A B 35 -3.088 -1.617 10.510 1.00 64.57 C
ATOM 12 O2' A B 35 -3.190 -3.010 10.731 1.00 64.56 O
ATOM 13 C1' A B 35 -2.909 -1.314 9.028 1.00 62.69 C
ATOM 14 N9 A B 35 -2.286 -0.018 8.777 1.00 58.99 N
ATOM 15 C8 A B 35 -2.824 1.038 8.095 1.00 58.38 C
ATOM 16 N7 A B 35 -2.030 2.081 8.026 1.00 59.00 N
ATOM 17 C5 A B 35 -0.895 1.682 8.713 1.00 57.28 C
ATOM 18 C6 A B 35 0.319 2.337 8.999 1.00 58.30 C
ATOM 19 N6 A B 35 0.595 3.585 8.608 1.00 65.36 N
ATOM 20 N1 A B 35 1.242 1.655 9.706 1.00 60.05 N
ATOM 21 C2 A B 35 0.960 0.404 10.095 1.00 65.55 C
ATOM 22 N3 A B 35 -0.143 -0.315 9.888 1.00 57.28 N
ATOM 23 C4 A B 35 -1.038 0.391 9.184 1.00 56.15 C
ATOM 24 P A B 36 -5.054 -0.546 13.254 1.00 76.06 P
ATOM 25 OP1 A B 36 -5.761 -1.340 14.290 1.00 73.59 O
ATOM 26 OP2 A B 36 -5.511 0.819 12.904 1.00 55.70 O
ATOM 27 O5' A B 36 -3.506 -0.468 13.655 1.00 63.64 O
TER
ATOM 2 P G A 20 6.486 -2.835 7.163 1.00 68.24 P
ATOM 3 OP1 G A 20 7.268 -1.994 8.094 1.00 76.96 O
ATOM 4 OP2 G A 20 7.008 -4.160 6.755 1.00 57.70 O
ATOM 5 O5' G A 20 5.031 -3.036 7.789 1.00 65.85 O
ATOM 6 C5' G A 20 4.859 -3.716 9.025 1.00 64.87 C
ATOM 7 C4' G A 20 3.605 -3.174 9.678 1.00 66.20 C
ATOM 8 O4' G A 20 2.681 -2.809 8.621 1.00 65.98 O
ATOM 9 C3' G A 20 2.828 -4.145 10.555 1.00 66.42 C
ATOM 10 O3' G A 20 3.273 -4.099 11.899 1.00 74.87 O
ATOM 11 C2' G A 20 1.426 -3.568 10.422 1.00 66.44 C
ATOM 12 O2' G A 20 1.281 -2.346 11.117 1.00 58.59 O
ATOM 13 C1' G A 20 1.405 -3.337 8.919 1.00 68.70 C
ATOM 14 N9 G A 20 1.207 -4.581 8.179 1.00 65.28 N
ATOM 15 C8 G A 20 2.162 -5.391 7.609 1.00 69.43 C
ATOM 16 N7 G A 20 1.669 -6.447 7.021 1.00 68.40 N
ATOM 17 C5 G A 20 0.298 -6.329 7.216 1.00 66.61 C
ATOM 18 C6 G A 20 -0.760 -7.175 6.805 1.00 67.25 C
ATOM 19 O6 G A 20 -0.694 -8.232 6.163 1.00 67.39 O
ATOM 20 N1 G A 20 -1.998 -6.682 7.213 1.00 65.76 N
ATOM 21 C2 G A 20 -2.188 -5.522 7.927 1.00 62.58 C
ATOM 22 N2 G A 20 -3.454 -5.206 8.230 1.00 62.69 N
ATOM 23 N3 G A 20 -1.208 -4.723 8.318 1.00 57.23 N
ATOM 24 C4 G A 20 0.001 -5.189 7.928 1.00 59.94 C
ATOM 25 P G A 21 3.122 -5.405 12.811 1.00 77.36 P
ATOM 26 OP1 G A 21 3.578 -5.049 14.174 1.00 61.88 O
ATOM 27 OP2 G A 21 3.759 -6.533 12.092 1.00 64.51 O
ATOM 28 O5' G A 21 1.536 -5.641 12.859 1.00 61.12 O
TER
ATOM 1 O3' G B 34 -6.764 2.204 7.126 1.00 68.41 O
ATOM 2 P A B 35 -6.500 2.429 8.691 1.00 68.96 P
ATOM 3 OP1 A B 35 -7.810 2.325 9.375 1.00 57.61 O
ATOM 4 OP2 A B 35 -5.676 3.648 8.850 1.00 68.15 O
ATOM 5 O5' A B 35 -5.619 1.159 9.103 1.00 59.18 O
ATOM 6 C5' A B 35 -6.220 -0.131 9.153 1.00 63.71 C
ATOM 7 C4' A B 35 -5.198 -1.191 9.520 1.00 61.78 C
ATOM 8 O4' A B 35 -4.208 -1.292 8.466 1.00 66.43 O
ATOM 9 C3' A B 35 -4.398 -0.888 10.778 1.00 64.91 C
ATOM 10 O3' A B 35 -5.050 -1.414 11.915 1.00 60.19 O
ATOM 11 C2' A B 35 -3.088 -1.617 10.510 1.00 64.57 C
ATOM 12 O2' A B 35 -3.190 -3.010 10.731 1.00 64.56 O
ATOM 13 C1' A B 35 -2.909 -1.314 9.028 1.00 62.69 C
ATOM 14 N9 A B 35 -2.286 -0.018 8.777 1.00 58.99 N
ATOM 15 C8 A B 35 -2.824 1.038 8.095 1.00 58.38 C
ATOM 16 N7 A B 35 -2.030 2.081 8.026 1.00 59.00 N
ATOM 17 C5 A B 35 -0.895 1.682 8.713 1.00 57.28 C
ATOM 18 C6 A B 35 0.319 2.337 8.999 1.00 58.30 C
ATOM 19 N6 A B 35 0.595 3.585 8.608 1.00 65.36 N
ATOM 20 N1 A B 35 1.242 1.655 9.706 1.00 60.05 N
ATOM 21 C2 A B 35 0.960 0.404 10.095 1.00 65.55 C
ATOM 22 N3 A B 35 -0.143 -0.315 9.888 1.00 57.28 N
ATOM 23 C4 A B 35 -1.038 0.391 9.184 1.00 56.15 C
ATOM 24 P A B 36 -5.054 -0.546 13.254 1.00 76.06 P
ATOM 25 OP1 A B 36 -5.761 -1.340 14.290 1.00 73.59 O
ATOM 26 OP2 A B 36 -5.511 0.819 12.904 1.00 55.70 O
ATOM 27 O5' A B 36 -3.506 -0.468 13.655 1.00 63.64 O
TER
Atoms:
OP1: (7.268,-1.994,8.094)
OP2: (7.008,-4.160,6.755)
C3': (2.828,-4.145,10.555)
C1': (1.405,-3.337,8.919)
C5': (4.859,-3.716,9.025)
O6: (-0.694,-8.232,6.163)
O4': (2.681,-2.809,8.621)
C8: (2.162,-5.391,7.609)
C2: (-2.188,-5.522,7.927)
C6: (-0.760,-7.175,6.805)
C5: (0.298,-6.329,7.216)
C4: (0.001,-5.189,7.928)
P: (6.486,-2.835,7.163)
C4': (3.605,-3.174,9.678)
C2': (1.426,-3.568,10.422)
O2': (1.281,-2.346,11.117)
N1: (-1.998,-6.682,7.213)
N2: (-3.454,-5.206,8.230)
N3: (-1.208,-4.723,8.318)
N7: (1.669,-6.447,7.021)
N9: (1.207,-4.581,8.179)
O5': (5.031,-3.036,7.789)
O3': (3.273,-4.099,11.899)
OP2: (7.008,-4.160,6.755)
C3': (2.828,-4.145,10.555)
C1': (1.405,-3.337,8.919)
C5': (4.859,-3.716,9.025)
O6: (-0.694,-8.232,6.163)
O4': (2.681,-2.809,8.621)
C8: (2.162,-5.391,7.609)
C2: (-2.188,-5.522,7.927)
C6: (-0.760,-7.175,6.805)
C5: (0.298,-6.329,7.216)
C4: (0.001,-5.189,7.928)
P: (6.486,-2.835,7.163)
C4': (3.605,-3.174,9.678)
C2': (1.426,-3.568,10.422)
O2': (1.281,-2.346,11.117)
N1: (-1.998,-6.682,7.213)
N2: (-3.454,-5.206,8.230)
N3: (-1.208,-4.723,8.318)
N7: (1.669,-6.447,7.021)
N9: (1.207,-4.581,8.179)
O5': (5.031,-3.036,7.789)
O3': (3.273,-4.099,11.899)
OP1: (-7.810,2.325,9.375)
OP2: (-5.676,3.648,8.850)
C3': (-4.398,-0.888,10.778)
C1': (-2.909,-1.314,9.028)
C5': (-6.220,-0.131,9.153)
O4': (-4.208,-1.292,8.466)
C8: (-2.824,1.038,8.095)
O2': (-3.190,-3.010,10.731)
C6: (0.319,2.337,8.999)
C5: (-0.895,1.682,8.713)
C4: (-1.038,0.391,9.184)
P: (-6.500,2.429,8.691)
C4': (-5.198,-1.191,9.520)
C2': (-3.088,-1.617,10.510)
C2: (0.960,0.404,10.095)
N1: (1.242,1.655,9.706)
N3: (-0.143,-0.315,9.888)
N6: (0.595,3.585,8.608)
N7: (-2.030,2.081,8.026)
N9: (-2.286,-0.018,8.777)
O5': (-5.619,1.159,9.103)
O3': (-5.050,-1.414,11.915)
OP2: (-5.676,3.648,8.850)
C3': (-4.398,-0.888,10.778)
C1': (-2.909,-1.314,9.028)
C5': (-6.220,-0.131,9.153)
O4': (-4.208,-1.292,8.466)
C8: (-2.824,1.038,8.095)
O2': (-3.190,-3.010,10.731)
C6: (0.319,2.337,8.999)
C5: (-0.895,1.682,8.713)
C4: (-1.038,0.391,9.184)
P: (-6.500,2.429,8.691)
C4': (-5.198,-1.191,9.520)
C2': (-3.088,-1.617,10.510)
C2: (0.960,0.404,10.095)
N1: (1.242,1.655,9.706)
N3: (-0.143,-0.315,9.888)
N6: (0.595,3.585,8.608)
N7: (-2.030,2.081,8.026)
N9: (-2.286,-0.018,8.777)
O5': (-5.619,1.159,9.103)
O3': (-5.050,-1.414,11.915)
Image (generated by PyMOL):