Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21028:2937
Extra
PDB:
ATOM 1 O3' C A1027 -67.751 -1.789 125.945 1.00 87.40 O
ATOM 2 P G A1028 -68.310 -1.343 127.376 1.00 88.37 P
ATOM 3 OP1 G A1028 -67.377 -1.884 128.393 1.00 89.14 O
ATOM 4 OP2 G A1028 -69.739 -1.735 127.427 1.00 89.39 O
ATOM 5 O5' G A1028 -68.194 0.232 127.319 1.00 87.40 O
ATOM 6 C5' G A1028 -66.935 0.859 127.221 1.00 86.34 C
ATOM 7 C4' G A1028 -67.090 2.346 127.180 1.00 85.61 C
ATOM 8 O4' G A1028 -67.812 2.715 125.982 1.00 84.73 O
ATOM 9 C3' G A1028 -67.940 2.955 128.281 1.00 86.73 C
ATOM 10 O3' G A1028 -67.289 3.045 129.532 1.00 87.51 O
ATOM 11 C2' G A1028 -68.327 4.296 127.680 1.00 85.73 C
ATOM 12 O2' G A1028 -67.225 5.204 127.701 1.00 84.76 O
ATOM 13 C1' G A1028 -68.581 3.880 126.233 1.00 84.78 C
ATOM 14 N9 G A1028 -70.000 3.579 125.992 1.00 85.48 N
ATOM 15 C8 G A1028 -70.616 2.365 125.941 1.00 86.37 C
ATOM 16 N7 G A1028 -71.895 2.488 125.721 1.00 86.84 N
ATOM 17 C5 G A1028 -72.126 3.852 125.622 1.00 86.23 C
ATOM 18 C6 G A1028 -73.301 4.597 125.394 1.00 86.38 C
ATOM 19 O6 G A1028 -74.449 4.198 125.219 1.00 87.11 O
ATOM 20 N1 G A1028 -73.076 5.956 125.388 1.00 85.63 N
ATOM 21 C2 G A1028 -71.864 6.539 125.582 1.00 84.83 C
ATOM 22 N2 G A1028 -71.816 7.879 125.548 1.00 84.21 N
ATOM 23 N3 G A1028 -70.767 5.855 125.797 1.00 84.68 N
ATOM 24 C4 G A1028 -70.966 4.530 125.794 1.00 85.39 C
ATOM 25 P G A1029 -68.153 2.885 130.876 1.00 97.15 P
ATOM 26 OP1 G A1029 -67.190 2.794 132.004 1.00 97.80 O
ATOM 27 OP2 G A1029 -69.114 1.760 130.650 1.00 98.01 O
ATOM 28 O5' G A1029 -68.942 4.268 130.947 1.00 96.95 O
TER
ATOM 1 O3' G B 936 -64.861 13.869 121.641 1.00 79.76 O
ATOM 2 P A B 937 -66.006 14.846 122.180 1.00 75.70 P
ATOM 3 OP1 A B 937 -66.603 15.494 120.987 1.00 74.90 O
ATOM 4 OP2 A B 937 -65.406 15.706 123.231 1.00 75.98 O
ATOM 5 O5' A B 937 -67.045 13.828 122.836 1.00 77.08 O
ATOM 6 C5' A B 937 -67.648 12.807 122.060 1.00 77.12 C
ATOM 7 C4' A B 937 -68.150 11.662 122.909 1.00 78.45 C
ATOM 8 O4' A B 937 -67.040 10.963 123.532 1.00 78.62 O
ATOM 9 C3' A B 937 -69.043 12.011 124.093 1.00 79.78 C
ATOM 10 O3' A B 937 -70.365 12.339 123.721 1.00 80.10 O
ATOM 11 C2' A B 937 -68.951 10.735 124.904 1.00 80.86 C
ATOM 12 O2' A B 937 -69.655 9.686 124.248 1.00 81.09 O
ATOM 13 C1' A B 937 -67.460 10.450 124.786 1.00 80.07 C
ATOM 14 N9 A B 937 -66.708 11.129 125.848 1.00 80.33 N
ATOM 15 C8 A B 937 -65.912 12.246 125.802 1.00 79.49 C
ATOM 16 N7 A B 937 -65.405 12.601 126.962 1.00 80.12 N
ATOM 17 C5 A B 937 -65.932 11.651 127.828 1.00 81.48 C
ATOM 18 C6 A B 937 -65.790 11.454 129.213 1.00 82.74 C
ATOM 19 N6 A B 937 -65.055 12.212 130.044 1.00 82.88 N
ATOM 20 N1 A B 937 -66.464 10.416 129.728 1.00 83.95 N
ATOM 21 C2 A B 937 -67.199 9.646 128.921 1.00 83.87 C
ATOM 22 N3 A B 937 -67.405 9.721 127.617 1.00 82.77 N
ATOM 23 C4 A B 937 -66.735 10.759 127.143 1.00 81.61 C
ATOM 24 P C B 938 -71.157 13.532 124.457 1.00 82.27 P
ATOM 25 OP1 C B 938 -72.430 13.708 123.711 1.00 82.36 O
ATOM 26 OP2 C B 938 -70.226 14.683 124.570 1.00 81.47 O
ATOM 27 O5' C B 938 -71.442 12.932 125.899 1.00 83.84 O
TER
ATOM 2 P G A1028 -68.310 -1.343 127.376 1.00 88.37 P
ATOM 3 OP1 G A1028 -67.377 -1.884 128.393 1.00 89.14 O
ATOM 4 OP2 G A1028 -69.739 -1.735 127.427 1.00 89.39 O
ATOM 5 O5' G A1028 -68.194 0.232 127.319 1.00 87.40 O
ATOM 6 C5' G A1028 -66.935 0.859 127.221 1.00 86.34 C
ATOM 7 C4' G A1028 -67.090 2.346 127.180 1.00 85.61 C
ATOM 8 O4' G A1028 -67.812 2.715 125.982 1.00 84.73 O
ATOM 9 C3' G A1028 -67.940 2.955 128.281 1.00 86.73 C
ATOM 10 O3' G A1028 -67.289 3.045 129.532 1.00 87.51 O
ATOM 11 C2' G A1028 -68.327 4.296 127.680 1.00 85.73 C
ATOM 12 O2' G A1028 -67.225 5.204 127.701 1.00 84.76 O
ATOM 13 C1' G A1028 -68.581 3.880 126.233 1.00 84.78 C
ATOM 14 N9 G A1028 -70.000 3.579 125.992 1.00 85.48 N
ATOM 15 C8 G A1028 -70.616 2.365 125.941 1.00 86.37 C
ATOM 16 N7 G A1028 -71.895 2.488 125.721 1.00 86.84 N
ATOM 17 C5 G A1028 -72.126 3.852 125.622 1.00 86.23 C
ATOM 18 C6 G A1028 -73.301 4.597 125.394 1.00 86.38 C
ATOM 19 O6 G A1028 -74.449 4.198 125.219 1.00 87.11 O
ATOM 20 N1 G A1028 -73.076 5.956 125.388 1.00 85.63 N
ATOM 21 C2 G A1028 -71.864 6.539 125.582 1.00 84.83 C
ATOM 22 N2 G A1028 -71.816 7.879 125.548 1.00 84.21 N
ATOM 23 N3 G A1028 -70.767 5.855 125.797 1.00 84.68 N
ATOM 24 C4 G A1028 -70.966 4.530 125.794 1.00 85.39 C
ATOM 25 P G A1029 -68.153 2.885 130.876 1.00 97.15 P
ATOM 26 OP1 G A1029 -67.190 2.794 132.004 1.00 97.80 O
ATOM 27 OP2 G A1029 -69.114 1.760 130.650 1.00 98.01 O
ATOM 28 O5' G A1029 -68.942 4.268 130.947 1.00 96.95 O
TER
ATOM 1 O3' G B 936 -64.861 13.869 121.641 1.00 79.76 O
ATOM 2 P A B 937 -66.006 14.846 122.180 1.00 75.70 P
ATOM 3 OP1 A B 937 -66.603 15.494 120.987 1.00 74.90 O
ATOM 4 OP2 A B 937 -65.406 15.706 123.231 1.00 75.98 O
ATOM 5 O5' A B 937 -67.045 13.828 122.836 1.00 77.08 O
ATOM 6 C5' A B 937 -67.648 12.807 122.060 1.00 77.12 C
ATOM 7 C4' A B 937 -68.150 11.662 122.909 1.00 78.45 C
ATOM 8 O4' A B 937 -67.040 10.963 123.532 1.00 78.62 O
ATOM 9 C3' A B 937 -69.043 12.011 124.093 1.00 79.78 C
ATOM 10 O3' A B 937 -70.365 12.339 123.721 1.00 80.10 O
ATOM 11 C2' A B 937 -68.951 10.735 124.904 1.00 80.86 C
ATOM 12 O2' A B 937 -69.655 9.686 124.248 1.00 81.09 O
ATOM 13 C1' A B 937 -67.460 10.450 124.786 1.00 80.07 C
ATOM 14 N9 A B 937 -66.708 11.129 125.848 1.00 80.33 N
ATOM 15 C8 A B 937 -65.912 12.246 125.802 1.00 79.49 C
ATOM 16 N7 A B 937 -65.405 12.601 126.962 1.00 80.12 N
ATOM 17 C5 A B 937 -65.932 11.651 127.828 1.00 81.48 C
ATOM 18 C6 A B 937 -65.790 11.454 129.213 1.00 82.74 C
ATOM 19 N6 A B 937 -65.055 12.212 130.044 1.00 82.88 N
ATOM 20 N1 A B 937 -66.464 10.416 129.728 1.00 83.95 N
ATOM 21 C2 A B 937 -67.199 9.646 128.921 1.00 83.87 C
ATOM 22 N3 A B 937 -67.405 9.721 127.617 1.00 82.77 N
ATOM 23 C4 A B 937 -66.735 10.759 127.143 1.00 81.61 C
ATOM 24 P C B 938 -71.157 13.532 124.457 1.00 82.27 P
ATOM 25 OP1 C B 938 -72.430 13.708 123.711 1.00 82.36 O
ATOM 26 OP2 C B 938 -70.226 14.683 124.570 1.00 81.47 O
ATOM 27 O5' C B 938 -71.442 12.932 125.899 1.00 83.84 O
TER
Atoms:
OP1: (-67.377,-1.884,128.393)
OP2: (-69.739,-1.735,127.427)
C3': (-67.940,2.955,128.281)
C1': (-68.581,3.880,126.233)
C5': (-66.935,0.859,127.221)
O6: (-74.449,4.198,125.219)
O4': (-67.812,2.715,125.982)
C8: (-70.616,2.365,125.941)
C2: (-71.864,6.539,125.582)
C6: (-73.301,4.597,125.394)
C5: (-72.126,3.852,125.622)
C4: (-70.966,4.530,125.794)
P: (-68.310,-1.343,127.376)
C4': (-67.090,2.346,127.180)
C2': (-68.327,4.296,127.680)
O2': (-67.225,5.204,127.701)
N1: (-73.076,5.956,125.388)
N2: (-71.816,7.879,125.548)
N3: (-70.767,5.855,125.797)
N7: (-71.895,2.488,125.721)
N9: (-70.000,3.579,125.992)
O5': (-68.194,0.232,127.319)
O3': (-67.289,3.045,129.532)
OP2: (-69.739,-1.735,127.427)
C3': (-67.940,2.955,128.281)
C1': (-68.581,3.880,126.233)
C5': (-66.935,0.859,127.221)
O6: (-74.449,4.198,125.219)
O4': (-67.812,2.715,125.982)
C8: (-70.616,2.365,125.941)
C2: (-71.864,6.539,125.582)
C6: (-73.301,4.597,125.394)
C5: (-72.126,3.852,125.622)
C4: (-70.966,4.530,125.794)
P: (-68.310,-1.343,127.376)
C4': (-67.090,2.346,127.180)
C2': (-68.327,4.296,127.680)
O2': (-67.225,5.204,127.701)
N1: (-73.076,5.956,125.388)
N2: (-71.816,7.879,125.548)
N3: (-70.767,5.855,125.797)
N7: (-71.895,2.488,125.721)
N9: (-70.000,3.579,125.992)
O5': (-68.194,0.232,127.319)
O3': (-67.289,3.045,129.532)
OP1: (-66.603,15.494,120.987)
OP2: (-65.406,15.706,123.231)
C3': (-69.043,12.011,124.093)
C1': (-67.460,10.450,124.786)
C5': (-67.648,12.807,122.060)
O4': (-67.040,10.963,123.532)
C8: (-65.912,12.246,125.802)
O2': (-69.655,9.686,124.248)
C6: (-65.790,11.454,129.213)
C5: (-65.932,11.651,127.828)
C4: (-66.735,10.759,127.143)
P: (-66.006,14.846,122.180)
C4': (-68.150,11.662,122.909)
C2': (-68.951,10.735,124.904)
C2: (-67.199,9.646,128.921)
N1: (-66.464,10.416,129.728)
N3: (-67.405,9.721,127.617)
N6: (-65.055,12.212,130.044)
N7: (-65.405,12.601,126.962)
N9: (-66.708,11.129,125.848)
O5': (-67.045,13.828,122.836)
O3': (-70.365,12.339,123.721)
OP2: (-65.406,15.706,123.231)
C3': (-69.043,12.011,124.093)
C1': (-67.460,10.450,124.786)
C5': (-67.648,12.807,122.060)
O4': (-67.040,10.963,123.532)
C8: (-65.912,12.246,125.802)
O2': (-69.655,9.686,124.248)
C6: (-65.790,11.454,129.213)
C5: (-65.932,11.651,127.828)
C4: (-66.735,10.759,127.143)
P: (-66.006,14.846,122.180)
C4': (-68.150,11.662,122.909)
C2': (-68.951,10.735,124.904)
C2: (-67.199,9.646,128.921)
N1: (-66.464,10.416,129.728)
N3: (-67.405,9.721,127.617)
N6: (-65.055,12.212,130.044)
N7: (-65.405,12.601,126.962)
N9: (-66.708,11.129,125.848)
O5': (-67.045,13.828,122.836)
O3': (-70.365,12.339,123.721)
Image (generated by PyMOL):