ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0998:01255

Extra

PDB:
ATOM 1 O3' G A 997 42.994 90.646 63.564 1.00 36.92 O
ATOM 2 P G A 998 44.134 91.149 64.569 1.00 37.33 P
ATOM 3 OP1 G A 998 44.988 92.078 63.806 1.00 39.71 O
ATOM 4 OP2 G A 998 44.739 89.975 65.236 1.00 34.81 O
ATOM 5 O5' G A 998 43.338 92.001 65.649 1.00 37.94 O
ATOM 6 C5' G A 998 42.654 93.205 65.258 1.00 39.12 C
ATOM 7 C4' G A 998 41.952 93.828 66.443 1.00 39.73 C
ATOM 8 O4' G A 998 40.876 92.965 66.903 1.00 39.71 O
ATOM 9 C3' G A 998 42.799 94.013 67.683 1.00 38.75 C
ATOM 10 O3' G A 998 43.650 95.137 67.592 1.00 41.27 O
ATOM 11 C2' G A 998 41.733 94.166 68.745 1.00 37.07 C
ATOM 12 O2' G A 998 41.120 95.431 68.661 1.00 38.92 O
ATOM 13 C1' G A 998 40.742 93.083 68.310 1.00 35.97 C
ATOM 14 N9 G A 998 41.114 91.808 68.916 1.00 32.56 N
ATOM 15 C8 G A 998 41.821 90.783 68.339 1.00 31.66 C
ATOM 16 N7 G A 998 42.107 89.825 69.178 1.00 30.77 N
ATOM 17 C5 G A 998 41.531 90.230 70.372 1.00 29.18 C
ATOM 18 C6 G A 998 41.542 89.623 71.641 1.00 29.76 C
ATOM 19 O6 G A 998 42.094 88.573 71.986 1.00 31.81 O
ATOM 20 N1 G A 998 40.835 90.375 72.574 1.00 29.55 N
ATOM 21 C2 G A 998 40.215 91.567 72.314 1.00 30.38 C
ATOM 22 N2 G A 998 39.604 92.159 73.342 1.00 33.04 N
ATOM 23 N3 G A 998 40.200 92.143 71.135 1.00 31.33 N
ATOM 24 C4 G A 998 40.881 91.430 70.218 1.00 30.96 C
ATOM 25 P A A 999 45.206 94.965 67.937 1.00 42.83 P
ATOM 26 OP1 A A 999 45.747 96.325 68.204 1.00 43.03 O
ATOM 27 OP2 A A 999 45.848 94.107 66.910 1.00 42.62 O
ATOM 28 O5' A A 999 45.179 94.123 69.284 1.00 40.29 O
TER

ATOM 1 O3' G B1254 40.383 98.300 73.366 1.00 36.04 O
ATOM 2 P A B1255 39.330 98.621 72.186 1.00 36.21 P
ATOM 3 OP1 A B1255 40.142 98.775 70.949 1.00 34.73 O
ATOM 4 OP2 A B1255 38.417 99.711 72.605 1.00 30.44 O
ATOM 5 O5' A B1255 38.519 97.260 72.020 1.00 35.98 O
ATOM 6 C5' A B1255 39.163 96.083 71.484 1.00 37.32 C
ATOM 7 C4' A B1255 38.183 94.934 71.409 1.00 40.10 C
ATOM 8 O4' A B1255 37.788 94.536 72.751 1.00 38.78 O
ATOM 9 C3' A B1255 36.868 95.240 70.707 1.00 40.76 C
ATOM 10 O3' A B1255 36.955 95.138 69.287 1.00 40.57 O
ATOM 11 C2' A B1255 35.935 94.206 71.316 1.00 40.41 C
ATOM 12 O2' A B1255 36.155 92.921 70.775 1.00 42.87 O
ATOM 13 C1' A B1255 36.404 94.216 72.770 1.00 39.49 C
ATOM 14 N9 A B1255 35.710 95.245 73.544 1.00 37.79 N
ATOM 15 C8 A B1255 36.154 96.506 73.830 1.00 38.80 C
ATOM 16 N7 A B1255 35.300 97.226 74.507 1.00 38.64 N
ATOM 17 C5 A B1255 34.222 96.381 74.682 1.00 37.38 C
ATOM 18 C6 A B1255 32.989 96.560 75.306 1.00 39.28 C
ATOM 19 N6 A B1255 32.611 97.708 75.874 1.00 40.10 N
ATOM 20 N1 A B1255 32.139 95.517 75.325 1.00 39.78 N
ATOM 21 C2 A B1255 32.516 94.379 74.737 1.00 40.52 C
ATOM 22 N3 A B1255 33.645 94.094 74.103 1.00 39.33 N
ATOM 23 C4 A B1255 34.465 95.152 74.111 1.00 37.51 C
ATOM 24 P U B1256 35.998 96.050 68.376 1.00 42.00 P
ATOM 25 OP1 U B1256 36.293 95.781 66.941 1.00 40.31 O
ATOM 26 OP2 U B1256 36.109 97.422 68.898 1.00 41.28 O
ATOM 27 O5' U B1256 34.524 95.537 68.716 1.00 40.75 O
TER

Atoms:
OP1: (44.988,92.078,63.806)
OP2: (44.739,89.975,65.236)
C3': (42.799,94.013,67.683)
C1': (40.742,93.083,68.310)
C5': (42.654,93.205,65.258)
O6: (42.094,88.573,71.986)
O4': (40.876,92.965,66.903)
C8: (41.821,90.783,68.339)
C2: (40.215,91.567,72.314)
C6: (41.542,89.623,71.641)
C5: (41.531,90.230,70.372)
C4: (40.881,91.430,70.218)
P: (44.134,91.149,64.569)
C4': (41.952,93.828,66.443)
C2': (41.733,94.166,68.745)
O2': (41.120,95.431,68.661)
N1: (40.835,90.375,72.574)
N2: (39.604,92.159,73.342)
N3: (40.200,92.143,71.135)
N7: (42.107,89.825,69.178)
N9: (41.114,91.808,68.916)
O5': (43.338,92.001,65.649)
O3': (43.650,95.137,67.592)
OP1: (40.142,98.775,70.949)
OP2: (38.417,99.711,72.605)
C3': (36.868,95.240,70.707)
C1': (36.404,94.216,72.770)
C5': (39.163,96.083,71.484)
O4': (37.788,94.536,72.751)
C8: (36.154,96.506,73.830)
O2': (36.155,92.921,70.775)
C6: (32.989,96.560,75.306)
C5: (34.222,96.381,74.682)
C4: (34.465,95.152,74.111)
P: (39.330,98.621,72.186)
C4': (38.183,94.934,71.409)
C2': (35.935,94.206,71.316)
C2: (32.516,94.379,74.737)
N1: (32.139,95.517,75.325)
N3: (33.645,94.094,74.103)
N6: (32.611,97.708,75.874)
N7: (35.300,97.226,74.507)
N9: (35.710,95.245,73.544)
O5': (38.519,97.260,72.020)
O3': (36.955,95.138,69.287)
Image (generated by PyMOL):
PyMOL image
show in jmol