Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1853:1850
Extra
PDB:
ATOM 1 O3' G A 852 23.996 -10.911 102.341 1.00 36.79 O
ATOM 2 P G A 853 23.554 -11.069 103.853 1.00 41.50 P
ATOM 3 OP1 G A 853 24.345 -12.211 104.436 1.00 41.59 O
ATOM 4 OP2 G A 853 22.083 -11.155 103.857 1.00 41.59 O
ATOM 5 O5' G A 853 24.054 -9.705 104.484 1.00 41.63 O
ATOM 6 C5' G A 853 23.447 -8.462 104.180 1.00 41.62 C
ATOM 7 C4' G A 853 24.045 -7.381 105.029 1.00 41.81 C
ATOM 8 O4' G A 853 25.273 -6.931 104.422 1.00 41.61 O
ATOM 9 C3' G A 853 23.256 -6.103 105.182 1.00 41.93 C
ATOM 10 O3' G A 853 22.216 -6.212 106.116 1.00 42.22 O
ATOM 11 C2' G A 853 24.347 -5.172 105.638 1.00 42.02 C
ATOM 12 O2' G A 853 24.774 -5.532 106.943 1.00 42.30 O
ATOM 13 C1' G A 853 25.448 -5.568 104.679 1.00 41.71 C
ATOM 14 N9 G A 853 25.333 -4.848 103.418 1.00 41.45 N
ATOM 15 C8 G A 853 25.037 -5.340 102.214 1.00 41.18 C
ATOM 16 N7 G A 853 25.016 -4.368 101.341 1.00 41.03 N
ATOM 17 C5 G A 853 25.339 -3.216 102.034 1.00 41.22 C
ATOM 18 C6 G A 853 25.453 -1.882 101.634 1.00 41.20 C
ATOM 19 O6 G A 853 25.289 -1.453 100.513 1.00 41.00 O
ATOM 20 N1 G A 853 25.775 -1.014 102.636 1.00 41.47 N
ATOM 21 C2 G A 853 25.954 -1.425 103.920 1.00 41.72 C
ATOM 22 N2 G A 853 26.286 -0.494 104.825 1.00 41.98 N
ATOM 23 N3 G A 853 25.828 -2.674 104.331 1.00 41.75 N
ATOM 24 C4 G A 853 25.518 -3.507 103.328 1.00 41.49 C
ATOM 25 P G A 854 20.779 -5.566 105.828 1.00 36.61 P
ATOM 26 OP1 G A 854 19.856 -6.182 106.824 1.00 36.89 O
ATOM 27 OP2 G A 854 20.494 -5.744 104.327 1.00 36.27 O
ATOM 28 O5' G A 854 20.987 -4.021 106.133 1.00 36.74 O
TER
ATOM 1 O3' U B 849 24.070 -1.841 111.771 1.00 40.85 O
ATOM 2 P A B 850 25.494 -2.481 111.609 1.00 40.52 P
ATOM 3 OP1 A B 850 25.334 -3.926 111.402 1.00 40.39 O
ATOM 4 OP2 A B 850 26.288 -2.024 112.738 1.00 40.84 O
ATOM 5 O5' A B 850 25.969 -1.813 110.282 1.00 40.18 O
ATOM 6 C5' A B 850 25.369 -2.165 109.062 1.00 39.85 C
ATOM 7 C4' A B 850 26.407 -2.419 108.029 1.00 39.52 C
ATOM 8 O4' A B 850 27.051 -1.143 107.652 1.00 39.47 O
ATOM 9 C3' A B 850 27.528 -3.339 108.482 1.00 39.54 C
ATOM 10 O3' A B 850 27.894 -4.186 107.401 1.00 39.20 O
ATOM 11 C2' A B 850 28.669 -2.350 108.759 1.00 39.62 C
ATOM 12 O2' A B 850 29.938 -2.899 108.644 1.00 39.52 O
ATOM 13 C1' A B 850 28.436 -1.304 107.691 1.00 39.42 C
ATOM 14 N9 A B 850 29.040 -0.020 107.983 1.00 39.56 N
ATOM 15 C8 A B 850 29.808 0.317 109.060 1.00 39.85 C
ATOM 16 N7 A B 850 30.228 1.563 109.036 1.00 39.93 N
ATOM 17 C5 A B 850 29.723 2.060 107.873 1.00 39.68 C
ATOM 18 C6 A B 850 29.789 3.305 107.304 1.00 39.64 C
ATOM 19 N6 A B 850 30.473 4.262 107.897 1.00 39.87 N
ATOM 20 N1 A B 850 29.162 3.564 106.125 1.00 39.39 N
ATOM 21 C2 A B 850 28.498 2.567 105.571 1.00 39.18 C
ATOM 22 N3 A B 850 28.352 1.324 106.038 1.00 39.19 N
ATOM 23 C4 A B 850 28.982 1.124 107.211 1.00 39.45 C
ATOM 24 P G B 851 28.173 -5.746 107.628 1.00 35.05 P
ATOM 25 OP1 G B 851 26.988 -6.324 108.349 1.00 35.26 O
ATOM 26 OP2 G B 851 29.521 -5.893 108.239 1.00 35.16 O
ATOM 27 O5' G B 851 28.202 -6.271 106.134 1.00 34.65 O
TER
ATOM 2 P G A 853 23.554 -11.069 103.853 1.00 41.50 P
ATOM 3 OP1 G A 853 24.345 -12.211 104.436 1.00 41.59 O
ATOM 4 OP2 G A 853 22.083 -11.155 103.857 1.00 41.59 O
ATOM 5 O5' G A 853 24.054 -9.705 104.484 1.00 41.63 O
ATOM 6 C5' G A 853 23.447 -8.462 104.180 1.00 41.62 C
ATOM 7 C4' G A 853 24.045 -7.381 105.029 1.00 41.81 C
ATOM 8 O4' G A 853 25.273 -6.931 104.422 1.00 41.61 O
ATOM 9 C3' G A 853 23.256 -6.103 105.182 1.00 41.93 C
ATOM 10 O3' G A 853 22.216 -6.212 106.116 1.00 42.22 O
ATOM 11 C2' G A 853 24.347 -5.172 105.638 1.00 42.02 C
ATOM 12 O2' G A 853 24.774 -5.532 106.943 1.00 42.30 O
ATOM 13 C1' G A 853 25.448 -5.568 104.679 1.00 41.71 C
ATOM 14 N9 G A 853 25.333 -4.848 103.418 1.00 41.45 N
ATOM 15 C8 G A 853 25.037 -5.340 102.214 1.00 41.18 C
ATOM 16 N7 G A 853 25.016 -4.368 101.341 1.00 41.03 N
ATOM 17 C5 G A 853 25.339 -3.216 102.034 1.00 41.22 C
ATOM 18 C6 G A 853 25.453 -1.882 101.634 1.00 41.20 C
ATOM 19 O6 G A 853 25.289 -1.453 100.513 1.00 41.00 O
ATOM 20 N1 G A 853 25.775 -1.014 102.636 1.00 41.47 N
ATOM 21 C2 G A 853 25.954 -1.425 103.920 1.00 41.72 C
ATOM 22 N2 G A 853 26.286 -0.494 104.825 1.00 41.98 N
ATOM 23 N3 G A 853 25.828 -2.674 104.331 1.00 41.75 N
ATOM 24 C4 G A 853 25.518 -3.507 103.328 1.00 41.49 C
ATOM 25 P G A 854 20.779 -5.566 105.828 1.00 36.61 P
ATOM 26 OP1 G A 854 19.856 -6.182 106.824 1.00 36.89 O
ATOM 27 OP2 G A 854 20.494 -5.744 104.327 1.00 36.27 O
ATOM 28 O5' G A 854 20.987 -4.021 106.133 1.00 36.74 O
TER
ATOM 1 O3' U B 849 24.070 -1.841 111.771 1.00 40.85 O
ATOM 2 P A B 850 25.494 -2.481 111.609 1.00 40.52 P
ATOM 3 OP1 A B 850 25.334 -3.926 111.402 1.00 40.39 O
ATOM 4 OP2 A B 850 26.288 -2.024 112.738 1.00 40.84 O
ATOM 5 O5' A B 850 25.969 -1.813 110.282 1.00 40.18 O
ATOM 6 C5' A B 850 25.369 -2.165 109.062 1.00 39.85 C
ATOM 7 C4' A B 850 26.407 -2.419 108.029 1.00 39.52 C
ATOM 8 O4' A B 850 27.051 -1.143 107.652 1.00 39.47 O
ATOM 9 C3' A B 850 27.528 -3.339 108.482 1.00 39.54 C
ATOM 10 O3' A B 850 27.894 -4.186 107.401 1.00 39.20 O
ATOM 11 C2' A B 850 28.669 -2.350 108.759 1.00 39.62 C
ATOM 12 O2' A B 850 29.938 -2.899 108.644 1.00 39.52 O
ATOM 13 C1' A B 850 28.436 -1.304 107.691 1.00 39.42 C
ATOM 14 N9 A B 850 29.040 -0.020 107.983 1.00 39.56 N
ATOM 15 C8 A B 850 29.808 0.317 109.060 1.00 39.85 C
ATOM 16 N7 A B 850 30.228 1.563 109.036 1.00 39.93 N
ATOM 17 C5 A B 850 29.723 2.060 107.873 1.00 39.68 C
ATOM 18 C6 A B 850 29.789 3.305 107.304 1.00 39.64 C
ATOM 19 N6 A B 850 30.473 4.262 107.897 1.00 39.87 N
ATOM 20 N1 A B 850 29.162 3.564 106.125 1.00 39.39 N
ATOM 21 C2 A B 850 28.498 2.567 105.571 1.00 39.18 C
ATOM 22 N3 A B 850 28.352 1.324 106.038 1.00 39.19 N
ATOM 23 C4 A B 850 28.982 1.124 107.211 1.00 39.45 C
ATOM 24 P G B 851 28.173 -5.746 107.628 1.00 35.05 P
ATOM 25 OP1 G B 851 26.988 -6.324 108.349 1.00 35.26 O
ATOM 26 OP2 G B 851 29.521 -5.893 108.239 1.00 35.16 O
ATOM 27 O5' G B 851 28.202 -6.271 106.134 1.00 34.65 O
TER
Atoms:
OP1: (24.345,-12.211,104.436)
OP2: (22.083,-11.155,103.857)
C3': (23.256,-6.103,105.182)
C1': (25.448,-5.568,104.679)
C5': (23.447,-8.462,104.180)
O6: (25.289,-1.453,100.513)
O4': (25.273,-6.931,104.422)
C8: (25.037,-5.340,102.214)
C2: (25.954,-1.425,103.920)
C6: (25.453,-1.882,101.634)
C5: (25.339,-3.216,102.034)
C4: (25.518,-3.507,103.328)
P: (23.554,-11.069,103.853)
C4': (24.045,-7.381,105.029)
C2': (24.347,-5.172,105.638)
O2': (24.774,-5.532,106.943)
N1: (25.775,-1.014,102.636)
N2: (26.286,-0.494,104.825)
N3: (25.828,-2.674,104.331)
N7: (25.016,-4.368,101.341)
N9: (25.333,-4.848,103.418)
O5': (24.054,-9.705,104.484)
O3': (22.216,-6.212,106.116)
OP2: (22.083,-11.155,103.857)
C3': (23.256,-6.103,105.182)
C1': (25.448,-5.568,104.679)
C5': (23.447,-8.462,104.180)
O6: (25.289,-1.453,100.513)
O4': (25.273,-6.931,104.422)
C8: (25.037,-5.340,102.214)
C2: (25.954,-1.425,103.920)
C6: (25.453,-1.882,101.634)
C5: (25.339,-3.216,102.034)
C4: (25.518,-3.507,103.328)
P: (23.554,-11.069,103.853)
C4': (24.045,-7.381,105.029)
C2': (24.347,-5.172,105.638)
O2': (24.774,-5.532,106.943)
N1: (25.775,-1.014,102.636)
N2: (26.286,-0.494,104.825)
N3: (25.828,-2.674,104.331)
N7: (25.016,-4.368,101.341)
N9: (25.333,-4.848,103.418)
O5': (24.054,-9.705,104.484)
O3': (22.216,-6.212,106.116)
OP1: (25.334,-3.926,111.402)
OP2: (26.288,-2.024,112.738)
C3': (27.528,-3.339,108.482)
C1': (28.436,-1.304,107.691)
C5': (25.369,-2.165,109.062)
O4': (27.051,-1.143,107.652)
C8: (29.808,0.317,109.060)
O2': (29.938,-2.899,108.644)
C6: (29.789,3.305,107.304)
C5: (29.723,2.060,107.873)
C4: (28.982,1.124,107.211)
P: (25.494,-2.481,111.609)
C4': (26.407,-2.419,108.029)
C2': (28.669,-2.350,108.759)
C2: (28.498,2.567,105.571)
N1: (29.162,3.564,106.125)
N3: (28.352,1.324,106.038)
N6: (30.473,4.262,107.897)
N7: (30.228,1.563,109.036)
N9: (29.040,-0.020,107.983)
O5': (25.969,-1.813,110.282)
O3': (27.894,-4.186,107.401)
OP2: (26.288,-2.024,112.738)
C3': (27.528,-3.339,108.482)
C1': (28.436,-1.304,107.691)
C5': (25.369,-2.165,109.062)
O4': (27.051,-1.143,107.652)
C8: (29.808,0.317,109.060)
O2': (29.938,-2.899,108.644)
C6: (29.789,3.305,107.304)
C5: (29.723,2.060,107.873)
C4: (28.982,1.124,107.211)
P: (25.494,-2.481,111.609)
C4': (26.407,-2.419,108.029)
C2': (28.669,-2.350,108.759)
C2: (28.498,2.567,105.571)
N1: (29.162,3.564,106.125)
N3: (28.352,1.324,106.038)
N6: (30.473,4.262,107.897)
N7: (30.228,1.563,109.036)
N9: (29.040,-0.020,107.983)
O5': (25.969,-1.813,110.282)
O3': (27.894,-4.186,107.401)
Image (generated by PyMOL):