Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61623:61759
Extra
PDB:
ATOM 1 O3' U A1622 250.049 -9.330 230.296 1.00 61.39 O
ATOM 2 P G A1623 249.735 -7.936 231.050 1.00 54.66 P
ATOM 3 OP1 G A1623 249.762 -6.853 229.999 1.00 54.65 O
ATOM 4 OP2 G A1623 250.657 -7.826 232.196 1.00 54.73 O
ATOM 5 O5' G A1623 248.255 -8.155 231.602 1.00 54.47 O
ATOM 6 C5' G A1623 247.157 -8.348 230.712 1.00 54.41 C
ATOM 7 C4' G A1623 245.874 -8.532 231.466 1.00 54.27 C
ATOM 8 O4' G A1623 245.815 -9.882 231.995 1.00 54.33 O
ATOM 9 C3' G A1623 245.714 -7.658 232.683 1.00 54.17 C
ATOM 10 O3' G A1623 245.284 -6.341 232.357 1.00 54.09 O
ATOM 11 C2' G A1623 244.737 -8.464 233.517 1.00 54.13 C
ATOM 12 O2' G A1623 243.444 -8.419 232.940 1.00 54.08 O
ATOM 13 C1' G A1623 245.274 -9.860 233.287 1.00 54.24 C
ATOM 14 N9 G A1623 246.338 -10.220 234.241 1.00 54.31 N
ATOM 15 C8 G A1623 247.686 -9.994 234.083 1.00 54.42 C
ATOM 16 N7 G A1623 248.387 -10.441 235.097 1.00 54.49 N
ATOM 17 C5 G A1623 247.448 -11.008 235.950 1.00 54.41 C
ATOM 18 C6 G A1623 247.612 -11.636 237.189 1.00 54.44 C
ATOM 19 O6 G A1623 248.643 -11.829 237.811 1.00 54.54 O
ATOM 20 N1 G A1623 246.414 -12.049 237.731 1.00 54.35 N
ATOM 21 C2 G A1623 245.206 -11.888 237.148 1.00 54.27 C
ATOM 22 N2 G A1623 244.177 -12.382 237.813 1.00 54.25 N
ATOM 23 N3 G A1623 245.036 -11.298 236.001 1.00 54.25 N
ATOM 24 C4 G A1623 246.188 -10.887 235.447 1.00 54.31 C
ATOM 25 P U A1624 245.528 -5.117 233.376 1.00 53.08 P
ATOM 26 OP1 U A1624 244.876 -3.959 232.830 1.00 53.00 O
ATOM 27 OP2 U A1624 246.967 -5.039 233.651 1.00 53.18 O
ATOM 28 O5' U A1624 244.730 -5.569 234.652 1.00 53.04 O
TER
ATOM 1 O3' C B1758 239.534 -6.870 235.033 1.00 52.43 O
ATOM 2 P A B1759 239.832 -7.782 233.733 1.00 59.34 P
ATOM 3 OP1 A B1759 240.318 -6.872 232.661 1.00 59.17 O
ATOM 4 OP2 A B1759 238.608 -8.624 233.474 1.00 59.22 O
ATOM 5 O5' A B1759 241.034 -8.700 234.214 1.00 60.13 O
ATOM 6 C5' A B1759 240.929 -9.491 235.382 1.00 60.42 C
ATOM 7 C4' A B1759 241.466 -10.874 235.142 1.00 61.16 C
ATOM 8 O4' A B1759 241.149 -11.711 236.292 1.00 61.42 O
ATOM 9 C3' A B1759 240.877 -11.596 233.915 1.00 61.20 C
ATOM 10 O3' A B1759 241.879 -12.428 233.307 1.00 61.90 O
ATOM 11 C2' A B1759 239.839 -12.488 234.567 1.00 61.19 C
ATOM 12 O2' A B1759 239.468 -13.599 233.791 1.00 61.49 O
ATOM 13 C1' A B1759 240.599 -12.897 235.811 1.00 61.69 C
ATOM 14 N9 A B1759 239.819 -13.521 236.852 1.00 61.70 N
ATOM 15 C8 A B1759 238.684 -14.253 236.789 1.00 61.59 C
ATOM 16 N7 A B1759 238.312 -14.735 237.936 1.00 61.72 N
ATOM 17 C5 A B1759 239.303 -14.323 238.802 1.00 61.96 C
ATOM 18 C6 A B1759 239.542 -14.507 240.184 1.00 62.23 C
ATOM 19 N6 A B1759 238.759 -15.196 241.032 1.00 62.30 N
ATOM 20 N1 A B1759 240.655 -13.951 240.693 1.00 62.45 N
ATOM 21 C2 A B1759 241.451 -13.268 239.891 1.00 62.40 C
ATOM 22 N3 A B1759 241.333 -13.031 238.600 1.00 62.16 N
ATOM 23 C4 A B1759 240.240 -13.596 238.121 1.00 61.96 C
ATOM 24 P A B1760 242.212 -12.338 231.732 1.00 72.44 P
ATOM 25 OP1 A B1760 243.116 -13.453 231.415 1.00 73.25 O
ATOM 26 OP2 A B1760 242.669 -10.962 231.465 1.00 72.05 O
ATOM 27 O5' A B1760 240.831 -12.568 231.007 1.00 72.00 O
TER
ATOM 2 P G A1623 249.735 -7.936 231.050 1.00 54.66 P
ATOM 3 OP1 G A1623 249.762 -6.853 229.999 1.00 54.65 O
ATOM 4 OP2 G A1623 250.657 -7.826 232.196 1.00 54.73 O
ATOM 5 O5' G A1623 248.255 -8.155 231.602 1.00 54.47 O
ATOM 6 C5' G A1623 247.157 -8.348 230.712 1.00 54.41 C
ATOM 7 C4' G A1623 245.874 -8.532 231.466 1.00 54.27 C
ATOM 8 O4' G A1623 245.815 -9.882 231.995 1.00 54.33 O
ATOM 9 C3' G A1623 245.714 -7.658 232.683 1.00 54.17 C
ATOM 10 O3' G A1623 245.284 -6.341 232.357 1.00 54.09 O
ATOM 11 C2' G A1623 244.737 -8.464 233.517 1.00 54.13 C
ATOM 12 O2' G A1623 243.444 -8.419 232.940 1.00 54.08 O
ATOM 13 C1' G A1623 245.274 -9.860 233.287 1.00 54.24 C
ATOM 14 N9 G A1623 246.338 -10.220 234.241 1.00 54.31 N
ATOM 15 C8 G A1623 247.686 -9.994 234.083 1.00 54.42 C
ATOM 16 N7 G A1623 248.387 -10.441 235.097 1.00 54.49 N
ATOM 17 C5 G A1623 247.448 -11.008 235.950 1.00 54.41 C
ATOM 18 C6 G A1623 247.612 -11.636 237.189 1.00 54.44 C
ATOM 19 O6 G A1623 248.643 -11.829 237.811 1.00 54.54 O
ATOM 20 N1 G A1623 246.414 -12.049 237.731 1.00 54.35 N
ATOM 21 C2 G A1623 245.206 -11.888 237.148 1.00 54.27 C
ATOM 22 N2 G A1623 244.177 -12.382 237.813 1.00 54.25 N
ATOM 23 N3 G A1623 245.036 -11.298 236.001 1.00 54.25 N
ATOM 24 C4 G A1623 246.188 -10.887 235.447 1.00 54.31 C
ATOM 25 P U A1624 245.528 -5.117 233.376 1.00 53.08 P
ATOM 26 OP1 U A1624 244.876 -3.959 232.830 1.00 53.00 O
ATOM 27 OP2 U A1624 246.967 -5.039 233.651 1.00 53.18 O
ATOM 28 O5' U A1624 244.730 -5.569 234.652 1.00 53.04 O
TER
ATOM 1 O3' C B1758 239.534 -6.870 235.033 1.00 52.43 O
ATOM 2 P A B1759 239.832 -7.782 233.733 1.00 59.34 P
ATOM 3 OP1 A B1759 240.318 -6.872 232.661 1.00 59.17 O
ATOM 4 OP2 A B1759 238.608 -8.624 233.474 1.00 59.22 O
ATOM 5 O5' A B1759 241.034 -8.700 234.214 1.00 60.13 O
ATOM 6 C5' A B1759 240.929 -9.491 235.382 1.00 60.42 C
ATOM 7 C4' A B1759 241.466 -10.874 235.142 1.00 61.16 C
ATOM 8 O4' A B1759 241.149 -11.711 236.292 1.00 61.42 O
ATOM 9 C3' A B1759 240.877 -11.596 233.915 1.00 61.20 C
ATOM 10 O3' A B1759 241.879 -12.428 233.307 1.00 61.90 O
ATOM 11 C2' A B1759 239.839 -12.488 234.567 1.00 61.19 C
ATOM 12 O2' A B1759 239.468 -13.599 233.791 1.00 61.49 O
ATOM 13 C1' A B1759 240.599 -12.897 235.811 1.00 61.69 C
ATOM 14 N9 A B1759 239.819 -13.521 236.852 1.00 61.70 N
ATOM 15 C8 A B1759 238.684 -14.253 236.789 1.00 61.59 C
ATOM 16 N7 A B1759 238.312 -14.735 237.936 1.00 61.72 N
ATOM 17 C5 A B1759 239.303 -14.323 238.802 1.00 61.96 C
ATOM 18 C6 A B1759 239.542 -14.507 240.184 1.00 62.23 C
ATOM 19 N6 A B1759 238.759 -15.196 241.032 1.00 62.30 N
ATOM 20 N1 A B1759 240.655 -13.951 240.693 1.00 62.45 N
ATOM 21 C2 A B1759 241.451 -13.268 239.891 1.00 62.40 C
ATOM 22 N3 A B1759 241.333 -13.031 238.600 1.00 62.16 N
ATOM 23 C4 A B1759 240.240 -13.596 238.121 1.00 61.96 C
ATOM 24 P A B1760 242.212 -12.338 231.732 1.00 72.44 P
ATOM 25 OP1 A B1760 243.116 -13.453 231.415 1.00 73.25 O
ATOM 26 OP2 A B1760 242.669 -10.962 231.465 1.00 72.05 O
ATOM 27 O5' A B1760 240.831 -12.568 231.007 1.00 72.00 O
TER
Atoms:
OP1: (249.762,-6.853,229.999)
OP2: (250.657,-7.826,232.196)
C3': (245.714,-7.658,232.683)
C1': (245.274,-9.860,233.287)
C5': (247.157,-8.348,230.712)
O6: (248.643,-11.829,237.811)
O4': (245.815,-9.882,231.995)
C8: (247.686,-9.994,234.083)
C2: (245.206,-11.888,237.148)
C6: (247.612,-11.636,237.189)
C5: (247.448,-11.008,235.950)
C4: (246.188,-10.887,235.447)
P: (249.735,-7.936,231.050)
C4': (245.874,-8.532,231.466)
C2': (244.737,-8.464,233.517)
O2': (243.444,-8.419,232.940)
N1: (246.414,-12.049,237.731)
N2: (244.177,-12.382,237.813)
N3: (245.036,-11.298,236.001)
N7: (248.387,-10.441,235.097)
N9: (246.338,-10.220,234.241)
O5': (248.255,-8.155,231.602)
O3': (245.284,-6.341,232.357)
OP2: (250.657,-7.826,232.196)
C3': (245.714,-7.658,232.683)
C1': (245.274,-9.860,233.287)
C5': (247.157,-8.348,230.712)
O6: (248.643,-11.829,237.811)
O4': (245.815,-9.882,231.995)
C8: (247.686,-9.994,234.083)
C2: (245.206,-11.888,237.148)
C6: (247.612,-11.636,237.189)
C5: (247.448,-11.008,235.950)
C4: (246.188,-10.887,235.447)
P: (249.735,-7.936,231.050)
C4': (245.874,-8.532,231.466)
C2': (244.737,-8.464,233.517)
O2': (243.444,-8.419,232.940)
N1: (246.414,-12.049,237.731)
N2: (244.177,-12.382,237.813)
N3: (245.036,-11.298,236.001)
N7: (248.387,-10.441,235.097)
N9: (246.338,-10.220,234.241)
O5': (248.255,-8.155,231.602)
O3': (245.284,-6.341,232.357)
OP1: (240.318,-6.872,232.661)
OP2: (238.608,-8.624,233.474)
C3': (240.877,-11.596,233.915)
C1': (240.599,-12.897,235.811)
C5': (240.929,-9.491,235.382)
O4': (241.149,-11.711,236.292)
C8: (238.684,-14.253,236.789)
O2': (239.468,-13.599,233.791)
C6: (239.542,-14.507,240.184)
C5: (239.303,-14.323,238.802)
C4: (240.240,-13.596,238.121)
P: (239.832,-7.782,233.733)
C4': (241.466,-10.874,235.142)
C2': (239.839,-12.488,234.567)
C2: (241.451,-13.268,239.891)
N1: (240.655,-13.951,240.693)
N3: (241.333,-13.031,238.600)
N6: (238.759,-15.196,241.032)
N7: (238.312,-14.735,237.936)
N9: (239.819,-13.521,236.852)
O5': (241.034,-8.700,234.214)
O3': (241.879,-12.428,233.307)
OP2: (238.608,-8.624,233.474)
C3': (240.877,-11.596,233.915)
C1': (240.599,-12.897,235.811)
C5': (240.929,-9.491,235.382)
O4': (241.149,-11.711,236.292)
C8: (238.684,-14.253,236.789)
O2': (239.468,-13.599,233.791)
C6: (239.542,-14.507,240.184)
C5: (239.303,-14.323,238.802)
C4: (240.240,-13.596,238.121)
P: (239.832,-7.782,233.733)
C4': (241.466,-10.874,235.142)
C2': (239.839,-12.488,234.567)
C2: (241.451,-13.268,239.891)
N1: (240.655,-13.951,240.693)
N3: (241.333,-13.031,238.600)
N6: (238.759,-15.196,241.032)
N7: (238.312,-14.735,237.936)
N9: (239.819,-13.521,236.852)
O5': (241.034,-8.700,234.214)
O3': (241.879,-12.428,233.307)
Image (generated by PyMOL):