Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A544:A541
Extra
PDB:
ATOM 1 O3' U A 543 143.151 109.960 -13.398 1.00 63.60 O
ATOM 2 P G A 544 144.461 110.766 -12.928 1.00 65.98 P
ATOM 3 OP1 G A 544 144.388 112.113 -13.594 1.00 66.36 O
ATOM 4 OP2 G A 544 144.590 110.656 -11.442 1.00 66.92 O
ATOM 5 O5' G A 544 145.654 109.976 -13.601 1.00 64.69 O
ATOM 6 C5' G A 544 146.891 110.624 -13.917 1.00 60.68 C
ATOM 7 C4' G A 544 147.906 109.592 -14.309 1.00 58.37 C
ATOM 8 O4' G A 544 148.230 108.794 -13.142 1.00 57.91 O
ATOM 9 C3' G A 544 147.435 108.621 -15.389 1.00 56.59 C
ATOM 10 O3' G A 544 148.563 108.251 -16.155 1.00 56.40 O
ATOM 11 C2' G A 544 146.995 107.402 -14.581 1.00 55.62 C
ATOM 12 O2' G A 544 147.168 106.197 -15.280 1.00 55.65 O
ATOM 13 C1' G A 544 147.981 107.430 -13.415 1.00 56.16 C
ATOM 14 N9 G A 544 147.500 106.807 -12.188 1.00 55.42 N
ATOM 15 C8 G A 544 146.527 107.296 -11.354 1.00 55.61 C
ATOM 16 N7 G A 544 146.357 106.568 -10.286 1.00 55.55 N
ATOM 17 C5 G A 544 147.263 105.530 -10.425 1.00 55.32 C
ATOM 18 C6 G A 544 147.558 104.449 -9.553 1.00 55.61 C
ATOM 19 O6 G A 544 147.090 104.211 -8.436 1.00 56.16 O
ATOM 20 N1 G A 544 148.526 103.609 -10.088 1.00 55.15 N
ATOM 21 C2 G A 544 149.152 103.795 -11.290 1.00 54.33 C
ATOM 22 N2 G A 544 150.053 102.860 -11.619 1.00 53.71 N
ATOM 23 N3 G A 544 148.909 104.820 -12.104 1.00 54.73 N
ATOM 24 C4 G A 544 147.958 105.642 -11.609 1.00 55.11 C
ATOM 25 P G A 545 148.954 109.070 -17.479 1.00 54.19 P
ATOM 26 OP1 G A 545 148.424 108.228 -18.630 1.00 54.55 O
ATOM 27 OP2 G A 545 148.566 110.484 -17.318 1.00 52.12 O
ATOM 28 O5' G A 545 150.534 108.974 -17.482 1.00 52.69 O
TER
ATOM 1 O3' C B 540 149.952 98.432 -15.223 1.00 55.85 O
ATOM 2 P A B 541 148.775 99.180 -14.402 1.00 54.53 P
ATOM 3 OP1 A B 541 149.147 99.271 -12.942 1.00 52.11 O
ATOM 4 OP2 A B 541 147.485 98.575 -14.782 1.00 50.49 O
ATOM 5 O5' A B 541 148.857 100.653 -14.995 1.00 53.53 O
ATOM 6 C5' A B 541 148.296 101.769 -14.291 1.00 53.67 C
ATOM 7 C4' A B 541 148.693 103.061 -14.954 1.00 53.11 C
ATOM 8 O4' A B 541 149.990 103.488 -14.524 1.00 54.13 O
ATOM 9 C3' A B 541 148.790 103.030 -16.461 1.00 53.34 C
ATOM 10 O3' A B 541 147.508 103.272 -16.907 1.00 55.16 O
ATOM 11 C2' A B 541 149.717 104.203 -16.788 1.00 54.48 C
ATOM 12 O2' A B 541 149.005 105.377 -17.159 1.00 55.39 O
ATOM 13 C1' A B 541 150.513 104.378 -15.481 1.00 54.46 C
ATOM 14 N9 A B 541 151.971 104.224 -15.494 1.00 54.82 N
ATOM 15 C8 A B 541 152.840 104.925 -14.693 1.00 57.16 C
ATOM 16 N7 A B 541 154.101 104.626 -14.883 1.00 57.67 N
ATOM 17 C5 A B 541 154.062 103.661 -15.877 1.00 57.54 C
ATOM 18 C6 A B 541 155.068 102.955 -16.526 1.00 57.63 C
ATOM 19 N6 A B 541 156.366 103.138 -16.282 1.00 58.59 N
ATOM 20 N1 A B 541 154.699 102.050 -17.455 1.00 57.66 N
ATOM 21 C2 A B 541 153.402 101.890 -17.714 1.00 55.01 C
ATOM 22 N3 A B 541 152.362 102.505 -17.184 1.00 56.34 N
ATOM 23 C4 A B 541 152.759 103.393 -16.256 1.00 57.03 C
ATOM 24 P C B 542 147.058 102.788 -18.353 1.00 57.72 P
ATOM 25 OP1 C B 542 147.586 101.412 -18.517 1.00 58.61 O
ATOM 26 OP2 C B 542 147.415 103.887 -19.319 1.00 60.39 O
ATOM 27 O5' C B 542 145.478 102.693 -18.195 1.00 57.72 O
TER
ATOM 2 P G A 544 144.461 110.766 -12.928 1.00 65.98 P
ATOM 3 OP1 G A 544 144.388 112.113 -13.594 1.00 66.36 O
ATOM 4 OP2 G A 544 144.590 110.656 -11.442 1.00 66.92 O
ATOM 5 O5' G A 544 145.654 109.976 -13.601 1.00 64.69 O
ATOM 6 C5' G A 544 146.891 110.624 -13.917 1.00 60.68 C
ATOM 7 C4' G A 544 147.906 109.592 -14.309 1.00 58.37 C
ATOM 8 O4' G A 544 148.230 108.794 -13.142 1.00 57.91 O
ATOM 9 C3' G A 544 147.435 108.621 -15.389 1.00 56.59 C
ATOM 10 O3' G A 544 148.563 108.251 -16.155 1.00 56.40 O
ATOM 11 C2' G A 544 146.995 107.402 -14.581 1.00 55.62 C
ATOM 12 O2' G A 544 147.168 106.197 -15.280 1.00 55.65 O
ATOM 13 C1' G A 544 147.981 107.430 -13.415 1.00 56.16 C
ATOM 14 N9 G A 544 147.500 106.807 -12.188 1.00 55.42 N
ATOM 15 C8 G A 544 146.527 107.296 -11.354 1.00 55.61 C
ATOM 16 N7 G A 544 146.357 106.568 -10.286 1.00 55.55 N
ATOM 17 C5 G A 544 147.263 105.530 -10.425 1.00 55.32 C
ATOM 18 C6 G A 544 147.558 104.449 -9.553 1.00 55.61 C
ATOM 19 O6 G A 544 147.090 104.211 -8.436 1.00 56.16 O
ATOM 20 N1 G A 544 148.526 103.609 -10.088 1.00 55.15 N
ATOM 21 C2 G A 544 149.152 103.795 -11.290 1.00 54.33 C
ATOM 22 N2 G A 544 150.053 102.860 -11.619 1.00 53.71 N
ATOM 23 N3 G A 544 148.909 104.820 -12.104 1.00 54.73 N
ATOM 24 C4 G A 544 147.958 105.642 -11.609 1.00 55.11 C
ATOM 25 P G A 545 148.954 109.070 -17.479 1.00 54.19 P
ATOM 26 OP1 G A 545 148.424 108.228 -18.630 1.00 54.55 O
ATOM 27 OP2 G A 545 148.566 110.484 -17.318 1.00 52.12 O
ATOM 28 O5' G A 545 150.534 108.974 -17.482 1.00 52.69 O
TER
ATOM 1 O3' C B 540 149.952 98.432 -15.223 1.00 55.85 O
ATOM 2 P A B 541 148.775 99.180 -14.402 1.00 54.53 P
ATOM 3 OP1 A B 541 149.147 99.271 -12.942 1.00 52.11 O
ATOM 4 OP2 A B 541 147.485 98.575 -14.782 1.00 50.49 O
ATOM 5 O5' A B 541 148.857 100.653 -14.995 1.00 53.53 O
ATOM 6 C5' A B 541 148.296 101.769 -14.291 1.00 53.67 C
ATOM 7 C4' A B 541 148.693 103.061 -14.954 1.00 53.11 C
ATOM 8 O4' A B 541 149.990 103.488 -14.524 1.00 54.13 O
ATOM 9 C3' A B 541 148.790 103.030 -16.461 1.00 53.34 C
ATOM 10 O3' A B 541 147.508 103.272 -16.907 1.00 55.16 O
ATOM 11 C2' A B 541 149.717 104.203 -16.788 1.00 54.48 C
ATOM 12 O2' A B 541 149.005 105.377 -17.159 1.00 55.39 O
ATOM 13 C1' A B 541 150.513 104.378 -15.481 1.00 54.46 C
ATOM 14 N9 A B 541 151.971 104.224 -15.494 1.00 54.82 N
ATOM 15 C8 A B 541 152.840 104.925 -14.693 1.00 57.16 C
ATOM 16 N7 A B 541 154.101 104.626 -14.883 1.00 57.67 N
ATOM 17 C5 A B 541 154.062 103.661 -15.877 1.00 57.54 C
ATOM 18 C6 A B 541 155.068 102.955 -16.526 1.00 57.63 C
ATOM 19 N6 A B 541 156.366 103.138 -16.282 1.00 58.59 N
ATOM 20 N1 A B 541 154.699 102.050 -17.455 1.00 57.66 N
ATOM 21 C2 A B 541 153.402 101.890 -17.714 1.00 55.01 C
ATOM 22 N3 A B 541 152.362 102.505 -17.184 1.00 56.34 N
ATOM 23 C4 A B 541 152.759 103.393 -16.256 1.00 57.03 C
ATOM 24 P C B 542 147.058 102.788 -18.353 1.00 57.72 P
ATOM 25 OP1 C B 542 147.586 101.412 -18.517 1.00 58.61 O
ATOM 26 OP2 C B 542 147.415 103.887 -19.319 1.00 60.39 O
ATOM 27 O5' C B 542 145.478 102.693 -18.195 1.00 57.72 O
TER
Atoms:
OP1: (144.388,112.113,-13.594)
OP2: (144.590,110.656,-11.442)
C3': (147.435,108.621,-15.389)
C1': (147.981,107.430,-13.415)
C5': (146.891,110.624,-13.917)
O6: (147.090,104.211,-8.436)
O4': (148.230,108.794,-13.142)
C8: (146.527,107.296,-11.354)
C2: (149.152,103.795,-11.290)
C6: (147.558,104.449,-9.553)
C5: (147.263,105.530,-10.425)
C4: (147.958,105.642,-11.609)
P: (144.461,110.766,-12.928)
C4': (147.906,109.592,-14.309)
C2': (146.995,107.402,-14.581)
O2': (147.168,106.197,-15.280)
N1: (148.526,103.609,-10.088)
N2: (150.053,102.860,-11.619)
N3: (148.909,104.820,-12.104)
N7: (146.357,106.568,-10.286)
N9: (147.500,106.807,-12.188)
O5': (145.654,109.976,-13.601)
O3': (148.563,108.251,-16.155)
OP2: (144.590,110.656,-11.442)
C3': (147.435,108.621,-15.389)
C1': (147.981,107.430,-13.415)
C5': (146.891,110.624,-13.917)
O6: (147.090,104.211,-8.436)
O4': (148.230,108.794,-13.142)
C8: (146.527,107.296,-11.354)
C2: (149.152,103.795,-11.290)
C6: (147.558,104.449,-9.553)
C5: (147.263,105.530,-10.425)
C4: (147.958,105.642,-11.609)
P: (144.461,110.766,-12.928)
C4': (147.906,109.592,-14.309)
C2': (146.995,107.402,-14.581)
O2': (147.168,106.197,-15.280)
N1: (148.526,103.609,-10.088)
N2: (150.053,102.860,-11.619)
N3: (148.909,104.820,-12.104)
N7: (146.357,106.568,-10.286)
N9: (147.500,106.807,-12.188)
O5': (145.654,109.976,-13.601)
O3': (148.563,108.251,-16.155)
OP1: (149.147,99.271,-12.942)
OP2: (147.485,98.575,-14.782)
C3': (148.790,103.030,-16.461)
C1': (150.513,104.378,-15.481)
C5': (148.296,101.769,-14.291)
O4': (149.990,103.488,-14.524)
C8: (152.840,104.925,-14.693)
O2': (149.005,105.377,-17.159)
C6: (155.068,102.955,-16.526)
C5: (154.062,103.661,-15.877)
C4: (152.759,103.393,-16.256)
P: (148.775,99.180,-14.402)
C4': (148.693,103.061,-14.954)
C2': (149.717,104.203,-16.788)
C2: (153.402,101.890,-17.714)
N1: (154.699,102.050,-17.455)
N3: (152.362,102.505,-17.184)
N6: (156.366,103.138,-16.282)
N7: (154.101,104.626,-14.883)
N9: (151.971,104.224,-15.494)
O5': (148.857,100.653,-14.995)
O3': (147.508,103.272,-16.907)
OP2: (147.485,98.575,-14.782)
C3': (148.790,103.030,-16.461)
C1': (150.513,104.378,-15.481)
C5': (148.296,101.769,-14.291)
O4': (149.990,103.488,-14.524)
C8: (152.840,104.925,-14.693)
O2': (149.005,105.377,-17.159)
C6: (155.068,102.955,-16.526)
C5: (154.062,103.661,-15.877)
C4: (152.759,103.393,-16.256)
P: (148.775,99.180,-14.402)
C4': (148.693,103.061,-14.954)
C2': (149.717,104.203,-16.788)
C2: (153.402,101.890,-17.714)
N1: (154.699,102.050,-17.455)
N3: (152.362,102.505,-17.184)
N6: (156.366,103.138,-16.282)
N7: (154.101,104.626,-14.883)
N9: (151.971,104.224,-15.494)
O5': (148.857,100.653,-14.995)
O3': (147.508,103.272,-16.907)
Image (generated by PyMOL):