Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12091:12115
Extra
PDB:
ATOM 1 O3' G A2090 -4.520 -0.367 66.648 1.00 44.55 O
ATOM 2 P C A2091 -3.298 0.309 65.866 1.00 50.30 P
ATOM 3 OP1 C A2091 -2.482 1.064 66.871 1.00 50.16 O
ATOM 4 OP2 C A2091 -3.884 1.058 64.686 1.00 50.52 O
ATOM 5 O5' C A2091 -2.542 -0.998 65.396 1.00 50.06 O
ATOM 6 C5' C A2091 -1.469 -0.979 64.497 1.00 49.87 C
ATOM 7 C4' C A2091 -1.355 -2.312 63.817 1.00 49.79 C
ATOM 8 O4' C A2091 -2.156 -3.294 64.534 1.00 49.88 O
ATOM 9 C3' C A2091 -1.886 -2.336 62.415 1.00 49.97 C
ATOM 10 O3' C A2091 -0.909 -1.980 61.500 1.00 49.83 O
ATOM 11 C2' C A2091 -2.412 -3.742 62.214 1.00 50.01 C
ATOM 12 O2' C A2091 -1.387 -4.580 61.751 1.00 49.79 O
ATOM 13 C1' C A2091 -2.782 -4.176 63.625 1.00 50.00 C
ATOM 14 N1 C A2091 -4.232 -4.167 63.870 1.00 50.30 N
ATOM 15 C2 C A2091 -5.093 -4.896 63.076 1.00 50.50 C
ATOM 16 O2 C A2091 -4.570 -5.483 62.153 1.00 50.41 O
ATOM 17 N3 C A2091 -6.435 -4.958 63.287 1.00 50.79 N
ATOM 18 C4 C A2091 -6.887 -4.278 64.323 1.00 50.87 C
ATOM 19 N4 C A2091 -8.173 -4.303 64.588 1.00 51.16 N
ATOM 20 C5 C A2091 -6.049 -3.531 65.182 1.00 50.68 C
ATOM 21 C6 C A2091 -4.736 -3.513 64.942 1.00 50.40 C
ATOM 22 P C A2092 -1.005 -0.566 60.792 1.00 46.54 P
ATOM 23 OP1 C A2092 0.304 -0.322 60.119 1.00 46.33 O
ATOM 24 OP2 C A2092 -1.468 0.410 61.811 1.00 46.65 O
ATOM 25 O5' C A2092 -2.151 -0.823 59.701 1.00 46.83 O
TER
ATOM 1 O3' G B2114 -10.291 -4.878 69.421 1.00 52.71 O
ATOM 2 P C B2115 -8.965 -4.756 68.518 1.00 56.84 P
ATOM 3 OP1 C B2115 -7.953 -4.099 69.322 1.00 56.62 O
ATOM 4 OP2 C B2115 -9.337 -4.150 67.228 1.00 56.98 O
ATOM 5 O5' C B2115 -8.572 -6.251 68.299 1.00 56.69 O
ATOM 6 C5' C B2115 -9.018 -6.934 67.152 1.00 56.80 C
ATOM 7 C4' C B2115 -7.891 -7.656 66.504 1.00 56.54 C
ATOM 8 O4' C B2115 -6.917 -6.708 66.006 1.00 56.36 O
ATOM 9 C3' C B2115 -7.099 -8.537 67.421 1.00 56.31 C
ATOM 10 O3' C B2115 -7.755 -9.768 67.657 1.00 56.44 O
ATOM 11 C2' C B2115 -5.792 -8.669 66.672 1.00 56.04 C
ATOM 12 O2' C B2115 -5.933 -9.598 65.622 1.00 56.09 O
ATOM 13 C1' C B2115 -5.645 -7.276 66.056 1.00 56.06 C
ATOM 14 N1 C B2115 -4.793 -6.415 66.859 1.00 55.87 N
ATOM 15 C2 C B2115 -3.429 -6.429 66.609 1.00 55.59 C
ATOM 16 O2 C B2115 -3.074 -7.170 65.701 1.00 55.52 O
ATOM 17 N3 C B2115 -2.560 -5.683 67.319 1.00 55.41 N
ATOM 18 C4 C B2115 -3.050 -4.932 68.288 1.00 55.53 C
ATOM 19 N4 C B2115 -2.226 -4.193 69.011 1.00 55.38 N
ATOM 20 C5 C B2115 -4.438 -4.896 68.575 1.00 55.82 C
ATOM 21 C6 C B2115 -5.293 -5.648 67.846 1.00 55.98 C
ATOM 22 P A B2116 -7.691 -10.460 69.108 1.00 60.60 P
ATOM 23 OP1 A B2116 -6.292 -10.959 69.284 1.00 60.29 O
ATOM 24 OP2 A B2116 -8.835 -11.412 69.185 1.00 60.86 O
ATOM 25 O5' A B2116 -7.930 -9.248 70.104 1.00 60.66 O
TER
ATOM 2 P C A2091 -3.298 0.309 65.866 1.00 50.30 P
ATOM 3 OP1 C A2091 -2.482 1.064 66.871 1.00 50.16 O
ATOM 4 OP2 C A2091 -3.884 1.058 64.686 1.00 50.52 O
ATOM 5 O5' C A2091 -2.542 -0.998 65.396 1.00 50.06 O
ATOM 6 C5' C A2091 -1.469 -0.979 64.497 1.00 49.87 C
ATOM 7 C4' C A2091 -1.355 -2.312 63.817 1.00 49.79 C
ATOM 8 O4' C A2091 -2.156 -3.294 64.534 1.00 49.88 O
ATOM 9 C3' C A2091 -1.886 -2.336 62.415 1.00 49.97 C
ATOM 10 O3' C A2091 -0.909 -1.980 61.500 1.00 49.83 O
ATOM 11 C2' C A2091 -2.412 -3.742 62.214 1.00 50.01 C
ATOM 12 O2' C A2091 -1.387 -4.580 61.751 1.00 49.79 O
ATOM 13 C1' C A2091 -2.782 -4.176 63.625 1.00 50.00 C
ATOM 14 N1 C A2091 -4.232 -4.167 63.870 1.00 50.30 N
ATOM 15 C2 C A2091 -5.093 -4.896 63.076 1.00 50.50 C
ATOM 16 O2 C A2091 -4.570 -5.483 62.153 1.00 50.41 O
ATOM 17 N3 C A2091 -6.435 -4.958 63.287 1.00 50.79 N
ATOM 18 C4 C A2091 -6.887 -4.278 64.323 1.00 50.87 C
ATOM 19 N4 C A2091 -8.173 -4.303 64.588 1.00 51.16 N
ATOM 20 C5 C A2091 -6.049 -3.531 65.182 1.00 50.68 C
ATOM 21 C6 C A2091 -4.736 -3.513 64.942 1.00 50.40 C
ATOM 22 P C A2092 -1.005 -0.566 60.792 1.00 46.54 P
ATOM 23 OP1 C A2092 0.304 -0.322 60.119 1.00 46.33 O
ATOM 24 OP2 C A2092 -1.468 0.410 61.811 1.00 46.65 O
ATOM 25 O5' C A2092 -2.151 -0.823 59.701 1.00 46.83 O
TER
ATOM 1 O3' G B2114 -10.291 -4.878 69.421 1.00 52.71 O
ATOM 2 P C B2115 -8.965 -4.756 68.518 1.00 56.84 P
ATOM 3 OP1 C B2115 -7.953 -4.099 69.322 1.00 56.62 O
ATOM 4 OP2 C B2115 -9.337 -4.150 67.228 1.00 56.98 O
ATOM 5 O5' C B2115 -8.572 -6.251 68.299 1.00 56.69 O
ATOM 6 C5' C B2115 -9.018 -6.934 67.152 1.00 56.80 C
ATOM 7 C4' C B2115 -7.891 -7.656 66.504 1.00 56.54 C
ATOM 8 O4' C B2115 -6.917 -6.708 66.006 1.00 56.36 O
ATOM 9 C3' C B2115 -7.099 -8.537 67.421 1.00 56.31 C
ATOM 10 O3' C B2115 -7.755 -9.768 67.657 1.00 56.44 O
ATOM 11 C2' C B2115 -5.792 -8.669 66.672 1.00 56.04 C
ATOM 12 O2' C B2115 -5.933 -9.598 65.622 1.00 56.09 O
ATOM 13 C1' C B2115 -5.645 -7.276 66.056 1.00 56.06 C
ATOM 14 N1 C B2115 -4.793 -6.415 66.859 1.00 55.87 N
ATOM 15 C2 C B2115 -3.429 -6.429 66.609 1.00 55.59 C
ATOM 16 O2 C B2115 -3.074 -7.170 65.701 1.00 55.52 O
ATOM 17 N3 C B2115 -2.560 -5.683 67.319 1.00 55.41 N
ATOM 18 C4 C B2115 -3.050 -4.932 68.288 1.00 55.53 C
ATOM 19 N4 C B2115 -2.226 -4.193 69.011 1.00 55.38 N
ATOM 20 C5 C B2115 -4.438 -4.896 68.575 1.00 55.82 C
ATOM 21 C6 C B2115 -5.293 -5.648 67.846 1.00 55.98 C
ATOM 22 P A B2116 -7.691 -10.460 69.108 1.00 60.60 P
ATOM 23 OP1 A B2116 -6.292 -10.959 69.284 1.00 60.29 O
ATOM 24 OP2 A B2116 -8.835 -11.412 69.185 1.00 60.86 O
ATOM 25 O5' A B2116 -7.930 -9.248 70.104 1.00 60.66 O
TER
Atoms:
C2: (-5.093,-4.896,63.076)
OP1: (-2.482,1.064,66.871)
OP2: (-3.884,1.058,64.686)
C4: (-6.887,-4.278,64.323)
O5': (-2.542,-0.998,65.396)
C3': (-1.886,-2.336,62.415)
C1': (-2.782,-4.176,63.625)
O4': (-2.156,-3.294,64.534)
C5': (-1.469,-0.979,64.497)
P: (-3.298,0.309,65.866)
O2: (-4.570,-5.483,62.153)
C4': (-1.355,-2.312,63.817)
C2': (-2.412,-3.742,62.214)
O2': (-1.387,-4.580,61.751)
N1: (-4.232,-4.167,63.870)
N3: (-6.435,-4.958,63.287)
N4: (-8.173,-4.303,64.588)
C6: (-4.736,-3.513,64.942)
C5: (-6.049,-3.531,65.182)
O3': (-0.909,-1.980,61.500)
OP1: (-2.482,1.064,66.871)
OP2: (-3.884,1.058,64.686)
C4: (-6.887,-4.278,64.323)
O5': (-2.542,-0.998,65.396)
C3': (-1.886,-2.336,62.415)
C1': (-2.782,-4.176,63.625)
O4': (-2.156,-3.294,64.534)
C5': (-1.469,-0.979,64.497)
P: (-3.298,0.309,65.866)
O2: (-4.570,-5.483,62.153)
C4': (-1.355,-2.312,63.817)
C2': (-2.412,-3.742,62.214)
O2': (-1.387,-4.580,61.751)
N1: (-4.232,-4.167,63.870)
N3: (-6.435,-4.958,63.287)
N4: (-8.173,-4.303,64.588)
C6: (-4.736,-3.513,64.942)
C5: (-6.049,-3.531,65.182)
O3': (-0.909,-1.980,61.500)
C2: (-3.429,-6.429,66.609)
OP1: (-7.953,-4.099,69.322)
OP2: (-9.337,-4.150,67.228)
C4: (-3.050,-4.932,68.288)
O5': (-8.572,-6.251,68.299)
C3': (-7.099,-8.537,67.421)
C1': (-5.645,-7.276,66.056)
O4': (-6.917,-6.708,66.006)
C5': (-9.018,-6.934,67.152)
P: (-8.965,-4.756,68.518)
O2: (-3.074,-7.170,65.701)
C4': (-7.891,-7.656,66.504)
C2': (-5.792,-8.669,66.672)
O2': (-5.933,-9.598,65.622)
N1: (-4.793,-6.415,66.859)
N3: (-2.560,-5.683,67.319)
N4: (-2.226,-4.193,69.011)
C6: (-5.293,-5.648,67.846)
C5: (-4.438,-4.896,68.575)
O3': (-7.755,-9.768,67.657)
OP1: (-7.953,-4.099,69.322)
OP2: (-9.337,-4.150,67.228)
C4: (-3.050,-4.932,68.288)
O5': (-8.572,-6.251,68.299)
C3': (-7.099,-8.537,67.421)
C1': (-5.645,-7.276,66.056)
O4': (-6.917,-6.708,66.006)
C5': (-9.018,-6.934,67.152)
P: (-8.965,-4.756,68.518)
O2: (-3.074,-7.170,65.701)
C4': (-7.891,-7.656,66.504)
C2': (-5.792,-8.669,66.672)
O2': (-5.933,-9.598,65.622)
N1: (-4.793,-6.415,66.859)
N3: (-2.560,-5.683,67.319)
N4: (-2.226,-4.193,69.011)
C6: (-5.293,-5.648,67.846)
C5: (-4.438,-4.896,68.575)
O3': (-7.755,-9.768,67.657)
Image (generated by PyMOL):