Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0375:02110
Extra
PDB:
ATOM 1 O3' G A 374 95.670 92.182 39.712 1.00 51.13 O
ATOM 2 P G A 375 94.697 92.664 40.898 1.00 52.60 P
ATOM 3 OP1 G A 375 94.821 91.670 41.997 1.00 52.54 O
ATOM 4 OP2 G A 375 93.357 92.954 40.313 1.00 50.91 O
ATOM 5 O5' G A 375 95.345 94.035 41.383 1.00 50.01 O
ATOM 6 C5' G A 375 96.633 94.036 42.011 1.00 49.92 C
ATOM 7 C4' G A 375 97.013 95.426 42.470 1.00 49.57 C
ATOM 8 O4' G A 375 97.203 96.299 41.328 1.00 49.25 O
ATOM 9 C3' G A 375 96.012 96.201 43.307 1.00 48.97 C
ATOM 10 O3' G A 375 95.909 95.763 44.652 1.00 47.82 O
ATOM 11 C2' G A 375 96.563 97.612 43.194 1.00 47.89 C
ATOM 12 O2' G A 375 97.720 97.799 43.988 1.00 48.42 O
ATOM 13 C1' G A 375 96.948 97.644 41.716 1.00 48.05 C
ATOM 14 N9 G A 375 95.860 98.171 40.900 1.00 46.82 N
ATOM 15 C8 G A 375 94.972 97.466 40.122 1.00 46.39 C
ATOM 16 N7 G A 375 94.089 98.228 39.537 1.00 46.86 N
ATOM 17 C5 G A 375 94.420 99.512 39.946 1.00 47.65 C
ATOM 18 C6 G A 375 93.823 100.764 39.633 1.00 47.62 C
ATOM 19 O6 G A 375 92.842 100.995 38.915 1.00 46.84 O
ATOM 20 N1 G A 375 94.488 101.814 40.257 1.00 47.84 N
ATOM 21 C2 G A 375 95.584 101.684 41.077 1.00 47.85 C
ATOM 22 N2 G A 375 96.089 102.821 41.582 1.00 47.48 N
ATOM 23 N3 G A 375 96.144 100.526 41.378 1.00 47.43 N
ATOM 24 C4 G A 375 95.516 99.491 40.782 1.00 47.27 C
ATOM 25 P G A 376 94.496 95.891 45.400 1.00 45.49 P
ATOM 26 OP1 G A 376 94.641 95.357 46.778 1.00 46.16 O
ATOM 27 OP2 G A 376 93.441 95.345 44.502 1.00 43.10 O
ATOM 28 O5' G A 376 94.273 97.464 45.482 1.00 46.14 O
TER
ATOM 1 O3' G B2109 98.184 111.025 42.464 1.00 50.66 O
ATOM 2 P A B2110 97.756 110.257 43.806 1.00 50.97 P
ATOM 3 OP1 A B2110 96.281 110.359 43.886 1.00 51.71 O
ATOM 4 OP2 A B2110 98.584 110.767 44.930 1.00 50.35 O
ATOM 5 O5' A B2110 98.166 108.739 43.527 1.00 51.58 O
ATOM 6 C5' A B2110 97.448 107.940 42.560 1.00 51.57 C
ATOM 7 C4' A B2110 98.074 106.565 42.421 1.00 51.26 C
ATOM 8 O4' A B2110 99.456 106.705 42.004 1.00 52.04 O
ATOM 9 C3' A B2110 98.169 105.707 43.672 1.00 51.47 C
ATOM 10 O3' A B2110 96.946 105.052 43.968 1.00 52.45 O
ATOM 11 C2' A B2110 99.270 104.721 43.300 1.00 51.44 C
ATOM 12 O2' A B2110 98.855 103.673 42.448 1.00 51.58 O
ATOM 13 C1' A B2110 100.224 105.629 42.527 1.00 51.22 C
ATOM 14 N9 A B2110 101.270 106.172 43.389 1.00 49.43 N
ATOM 15 C8 A B2110 101.365 107.424 43.939 1.00 49.56 C
ATOM 16 N7 A B2110 102.426 107.593 44.688 1.00 49.05 N
ATOM 17 C5 A B2110 103.074 106.372 44.623 1.00 47.91 C
ATOM 18 C6 A B2110 104.253 105.910 45.203 1.00 47.65 C
ATOM 19 N6 A B2110 105.019 106.652 45.999 1.00 48.65 N
ATOM 20 N1 A B2110 104.627 104.641 44.940 1.00 48.08 N
ATOM 21 C2 A B2110 103.848 103.895 44.145 1.00 48.25 C
ATOM 22 N3 A B2110 102.709 104.219 43.542 1.00 47.56 N
ATOM 23 C4 A B2110 102.376 105.489 43.824 1.00 48.39 C
ATOM 24 P U B2111 96.565 104.725 45.495 1.00 52.92 P
ATOM 25 OP1 U B2111 95.179 104.208 45.466 1.00 54.87 O
ATOM 26 OP2 U B2111 96.889 105.905 46.340 1.00 53.01 O
ATOM 27 O5' U B2111 97.524 103.516 45.894 1.00 51.25 O
TER
ATOM 2 P G A 375 94.697 92.664 40.898 1.00 52.60 P
ATOM 3 OP1 G A 375 94.821 91.670 41.997 1.00 52.54 O
ATOM 4 OP2 G A 375 93.357 92.954 40.313 1.00 50.91 O
ATOM 5 O5' G A 375 95.345 94.035 41.383 1.00 50.01 O
ATOM 6 C5' G A 375 96.633 94.036 42.011 1.00 49.92 C
ATOM 7 C4' G A 375 97.013 95.426 42.470 1.00 49.57 C
ATOM 8 O4' G A 375 97.203 96.299 41.328 1.00 49.25 O
ATOM 9 C3' G A 375 96.012 96.201 43.307 1.00 48.97 C
ATOM 10 O3' G A 375 95.909 95.763 44.652 1.00 47.82 O
ATOM 11 C2' G A 375 96.563 97.612 43.194 1.00 47.89 C
ATOM 12 O2' G A 375 97.720 97.799 43.988 1.00 48.42 O
ATOM 13 C1' G A 375 96.948 97.644 41.716 1.00 48.05 C
ATOM 14 N9 G A 375 95.860 98.171 40.900 1.00 46.82 N
ATOM 15 C8 G A 375 94.972 97.466 40.122 1.00 46.39 C
ATOM 16 N7 G A 375 94.089 98.228 39.537 1.00 46.86 N
ATOM 17 C5 G A 375 94.420 99.512 39.946 1.00 47.65 C
ATOM 18 C6 G A 375 93.823 100.764 39.633 1.00 47.62 C
ATOM 19 O6 G A 375 92.842 100.995 38.915 1.00 46.84 O
ATOM 20 N1 G A 375 94.488 101.814 40.257 1.00 47.84 N
ATOM 21 C2 G A 375 95.584 101.684 41.077 1.00 47.85 C
ATOM 22 N2 G A 375 96.089 102.821 41.582 1.00 47.48 N
ATOM 23 N3 G A 375 96.144 100.526 41.378 1.00 47.43 N
ATOM 24 C4 G A 375 95.516 99.491 40.782 1.00 47.27 C
ATOM 25 P G A 376 94.496 95.891 45.400 1.00 45.49 P
ATOM 26 OP1 G A 376 94.641 95.357 46.778 1.00 46.16 O
ATOM 27 OP2 G A 376 93.441 95.345 44.502 1.00 43.10 O
ATOM 28 O5' G A 376 94.273 97.464 45.482 1.00 46.14 O
TER
ATOM 1 O3' G B2109 98.184 111.025 42.464 1.00 50.66 O
ATOM 2 P A B2110 97.756 110.257 43.806 1.00 50.97 P
ATOM 3 OP1 A B2110 96.281 110.359 43.886 1.00 51.71 O
ATOM 4 OP2 A B2110 98.584 110.767 44.930 1.00 50.35 O
ATOM 5 O5' A B2110 98.166 108.739 43.527 1.00 51.58 O
ATOM 6 C5' A B2110 97.448 107.940 42.560 1.00 51.57 C
ATOM 7 C4' A B2110 98.074 106.565 42.421 1.00 51.26 C
ATOM 8 O4' A B2110 99.456 106.705 42.004 1.00 52.04 O
ATOM 9 C3' A B2110 98.169 105.707 43.672 1.00 51.47 C
ATOM 10 O3' A B2110 96.946 105.052 43.968 1.00 52.45 O
ATOM 11 C2' A B2110 99.270 104.721 43.300 1.00 51.44 C
ATOM 12 O2' A B2110 98.855 103.673 42.448 1.00 51.58 O
ATOM 13 C1' A B2110 100.224 105.629 42.527 1.00 51.22 C
ATOM 14 N9 A B2110 101.270 106.172 43.389 1.00 49.43 N
ATOM 15 C8 A B2110 101.365 107.424 43.939 1.00 49.56 C
ATOM 16 N7 A B2110 102.426 107.593 44.688 1.00 49.05 N
ATOM 17 C5 A B2110 103.074 106.372 44.623 1.00 47.91 C
ATOM 18 C6 A B2110 104.253 105.910 45.203 1.00 47.65 C
ATOM 19 N6 A B2110 105.019 106.652 45.999 1.00 48.65 N
ATOM 20 N1 A B2110 104.627 104.641 44.940 1.00 48.08 N
ATOM 21 C2 A B2110 103.848 103.895 44.145 1.00 48.25 C
ATOM 22 N3 A B2110 102.709 104.219 43.542 1.00 47.56 N
ATOM 23 C4 A B2110 102.376 105.489 43.824 1.00 48.39 C
ATOM 24 P U B2111 96.565 104.725 45.495 1.00 52.92 P
ATOM 25 OP1 U B2111 95.179 104.208 45.466 1.00 54.87 O
ATOM 26 OP2 U B2111 96.889 105.905 46.340 1.00 53.01 O
ATOM 27 O5' U B2111 97.524 103.516 45.894 1.00 51.25 O
TER
Atoms:
OP1: (94.821,91.670,41.997)
OP2: (93.357,92.954,40.313)
C3': (96.012,96.201,43.307)
C1': (96.948,97.644,41.716)
C5': (96.633,94.036,42.011)
O6: (92.842,100.995,38.915)
O4': (97.203,96.299,41.328)
C8: (94.972,97.466,40.122)
C2: (95.584,101.684,41.077)
C6: (93.823,100.764,39.633)
C5: (94.420,99.512,39.946)
C4: (95.516,99.491,40.782)
P: (94.697,92.664,40.898)
C4': (97.013,95.426,42.470)
C2': (96.563,97.612,43.194)
O2': (97.720,97.799,43.988)
N1: (94.488,101.814,40.257)
N2: (96.089,102.821,41.582)
N3: (96.144,100.526,41.378)
N7: (94.089,98.228,39.537)
N9: (95.860,98.171,40.900)
O5': (95.345,94.035,41.383)
O3': (95.909,95.763,44.652)
OP2: (93.357,92.954,40.313)
C3': (96.012,96.201,43.307)
C1': (96.948,97.644,41.716)
C5': (96.633,94.036,42.011)
O6: (92.842,100.995,38.915)
O4': (97.203,96.299,41.328)
C8: (94.972,97.466,40.122)
C2: (95.584,101.684,41.077)
C6: (93.823,100.764,39.633)
C5: (94.420,99.512,39.946)
C4: (95.516,99.491,40.782)
P: (94.697,92.664,40.898)
C4': (97.013,95.426,42.470)
C2': (96.563,97.612,43.194)
O2': (97.720,97.799,43.988)
N1: (94.488,101.814,40.257)
N2: (96.089,102.821,41.582)
N3: (96.144,100.526,41.378)
N7: (94.089,98.228,39.537)
N9: (95.860,98.171,40.900)
O5': (95.345,94.035,41.383)
O3': (95.909,95.763,44.652)
OP1: (96.281,110.359,43.886)
OP2: (98.584,110.767,44.930)
C3': (98.169,105.707,43.672)
C1': (100.224,105.629,42.527)
C5': (97.448,107.940,42.560)
O4': (99.456,106.705,42.004)
C8: (101.365,107.424,43.939)
O2': (98.855,103.673,42.448)
C6: (104.253,105.910,45.203)
C5: (103.074,106.372,44.623)
C4: (102.376,105.489,43.824)
P: (97.756,110.257,43.806)
C4': (98.074,106.565,42.421)
C2': (99.270,104.721,43.300)
C2: (103.848,103.895,44.145)
N1: (104.627,104.641,44.940)
N3: (102.709,104.219,43.542)
N6: (105.019,106.652,45.999)
N7: (102.426,107.593,44.688)
N9: (101.270,106.172,43.389)
O5': (98.166,108.739,43.527)
O3': (96.946,105.052,43.968)
OP2: (98.584,110.767,44.930)
C3': (98.169,105.707,43.672)
C1': (100.224,105.629,42.527)
C5': (97.448,107.940,42.560)
O4': (99.456,106.705,42.004)
C8: (101.365,107.424,43.939)
O2': (98.855,103.673,42.448)
C6: (104.253,105.910,45.203)
C5: (103.074,106.372,44.623)
C4: (102.376,105.489,43.824)
P: (97.756,110.257,43.806)
C4': (98.074,106.565,42.421)
C2': (99.270,104.721,43.300)
C2: (103.848,103.895,44.145)
N1: (104.627,104.641,44.940)
N3: (102.709,104.219,43.542)
N6: (105.019,106.652,45.999)
N7: (102.426,107.593,44.688)
N9: (101.270,106.172,43.389)
O5': (98.166,108.739,43.527)
O3': (96.946,105.052,43.968)
Image (generated by PyMOL):