Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02589:01773
Extra
PDB:
ATOM 1 O3' U A2588 75.752 175.299 108.316 1.00 56.22 O
ATOM 2 P G A2589 76.631 175.863 107.098 1.00 56.22 P
ATOM 3 OP1 G A2589 76.898 177.284 107.422 1.00 58.48 O
ATOM 4 OP2 G A2589 75.999 175.514 105.796 1.00 55.10 O
ATOM 5 O5' G A2589 78.001 175.069 107.241 1.00 52.87 O
ATOM 6 C5' G A2589 78.455 174.163 106.232 1.00 49.64 C
ATOM 7 C4' G A2589 79.929 173.919 106.408 1.00 49.65 C
ATOM 8 O4' G A2589 80.659 175.137 106.104 1.00 49.37 O
ATOM 9 C3' G A2589 80.328 173.568 107.830 1.00 49.10 C
ATOM 10 O3' G A2589 80.192 172.176 108.077 1.00 49.08 O
ATOM 11 C2' G A2589 81.767 174.053 107.894 1.00 49.49 C
ATOM 12 O2' G A2589 82.646 173.141 107.268 1.00 49.85 O
ATOM 13 C1' G A2589 81.682 175.338 107.065 1.00 49.89 C
ATOM 14 N9 G A2589 81.334 176.528 107.845 1.00 51.20 N
ATOM 15 C8 G A2589 80.076 177.062 108.013 1.00 51.41 C
ATOM 16 N7 G A2589 80.065 178.129 108.762 1.00 51.36 N
ATOM 17 C5 G A2589 81.395 178.319 109.108 1.00 51.81 C
ATOM 18 C6 G A2589 81.996 179.325 109.893 1.00 52.26 C
ATOM 19 O6 G A2589 81.458 180.288 110.456 1.00 54.10 O
ATOM 20 N1 G A2589 83.368 179.142 109.991 1.00 50.45 N
ATOM 21 C2 G A2589 84.071 178.127 109.403 1.00 50.29 C
ATOM 22 N2 G A2589 85.386 178.125 109.619 1.00 51.47 N
ATOM 23 N3 G A2589 83.527 177.186 108.658 1.00 51.30 N
ATOM 24 C4 G A2589 82.193 177.339 108.554 1.00 51.17 C
ATOM 25 P C A2590 79.897 171.656 109.565 1.00 50.20 P
ATOM 26 OP1 C A2590 79.830 170.175 109.512 1.00 50.12 O
ATOM 27 OP2 C A2590 78.762 172.417 110.127 1.00 50.68 O
ATOM 28 O5' C A2590 81.203 172.067 110.374 1.00 51.19 O
TER
ATOM 1 O3' G B1772 89.900 175.136 110.938 1.00 54.76 O
ATOM 2 P A B1773 89.701 173.820 110.045 1.00 53.93 P
ATOM 3 OP1 A B1773 89.304 172.738 110.983 1.00 54.11 O
ATOM 4 OP2 A B1773 90.889 173.631 109.171 1.00 51.89 O
ATOM 5 O5' A B1773 88.443 174.175 109.136 1.00 52.97 O
ATOM 6 C5' A B1773 87.100 174.113 109.659 1.00 51.63 C
ATOM 7 C4' A B1773 86.117 174.369 108.550 1.00 50.73 C
ATOM 8 O4' A B1773 86.304 175.722 108.072 1.00 49.28 O
ATOM 9 C3' A B1773 86.323 173.461 107.345 1.00 51.17 C
ATOM 10 O3' A B1773 85.476 172.321 107.455 1.00 51.81 O
ATOM 11 C2' A B1773 85.934 174.350 106.173 1.00 51.75 C
ATOM 12 O2' A B1773 84.543 174.390 105.952 1.00 53.71 O
ATOM 13 C1' A B1773 86.395 175.722 106.665 1.00 51.15 C
ATOM 14 N9 A B1773 87.766 176.081 106.304 1.00 52.36 N
ATOM 15 C8 A B1773 88.871 176.142 107.125 1.00 52.64 C
ATOM 16 N7 A B1773 89.959 176.545 106.518 1.00 52.65 N
ATOM 17 C5 A B1773 89.548 176.757 105.209 1.00 52.86 C
ATOM 18 C6 A B1773 90.230 177.206 104.072 1.00 54.09 C
ATOM 19 N6 A B1773 91.525 177.538 104.071 1.00 55.00 N
ATOM 20 N1 A B1773 89.530 177.308 102.920 1.00 54.27 N
ATOM 21 C2 A B1773 88.231 176.975 102.927 1.00 53.71 C
ATOM 22 N3 A B1773 87.479 176.543 103.933 1.00 51.44 N
ATOM 23 C4 A B1773 88.205 176.459 105.060 1.00 51.93 C
ATOM 24 P C B1774 85.971 170.888 106.930 1.00 52.58 P
ATOM 25 OP1 C B1774 84.747 170.051 106.846 1.00 52.11 O
ATOM 26 OP2 C B1774 87.106 170.446 107.773 1.00 52.21 O
ATOM 27 O5' C B1774 86.497 171.156 105.451 1.00 49.99 O
TER
ATOM 2 P G A2589 76.631 175.863 107.098 1.00 56.22 P
ATOM 3 OP1 G A2589 76.898 177.284 107.422 1.00 58.48 O
ATOM 4 OP2 G A2589 75.999 175.514 105.796 1.00 55.10 O
ATOM 5 O5' G A2589 78.001 175.069 107.241 1.00 52.87 O
ATOM 6 C5' G A2589 78.455 174.163 106.232 1.00 49.64 C
ATOM 7 C4' G A2589 79.929 173.919 106.408 1.00 49.65 C
ATOM 8 O4' G A2589 80.659 175.137 106.104 1.00 49.37 O
ATOM 9 C3' G A2589 80.328 173.568 107.830 1.00 49.10 C
ATOM 10 O3' G A2589 80.192 172.176 108.077 1.00 49.08 O
ATOM 11 C2' G A2589 81.767 174.053 107.894 1.00 49.49 C
ATOM 12 O2' G A2589 82.646 173.141 107.268 1.00 49.85 O
ATOM 13 C1' G A2589 81.682 175.338 107.065 1.00 49.89 C
ATOM 14 N9 G A2589 81.334 176.528 107.845 1.00 51.20 N
ATOM 15 C8 G A2589 80.076 177.062 108.013 1.00 51.41 C
ATOM 16 N7 G A2589 80.065 178.129 108.762 1.00 51.36 N
ATOM 17 C5 G A2589 81.395 178.319 109.108 1.00 51.81 C
ATOM 18 C6 G A2589 81.996 179.325 109.893 1.00 52.26 C
ATOM 19 O6 G A2589 81.458 180.288 110.456 1.00 54.10 O
ATOM 20 N1 G A2589 83.368 179.142 109.991 1.00 50.45 N
ATOM 21 C2 G A2589 84.071 178.127 109.403 1.00 50.29 C
ATOM 22 N2 G A2589 85.386 178.125 109.619 1.00 51.47 N
ATOM 23 N3 G A2589 83.527 177.186 108.658 1.00 51.30 N
ATOM 24 C4 G A2589 82.193 177.339 108.554 1.00 51.17 C
ATOM 25 P C A2590 79.897 171.656 109.565 1.00 50.20 P
ATOM 26 OP1 C A2590 79.830 170.175 109.512 1.00 50.12 O
ATOM 27 OP2 C A2590 78.762 172.417 110.127 1.00 50.68 O
ATOM 28 O5' C A2590 81.203 172.067 110.374 1.00 51.19 O
TER
ATOM 1 O3' G B1772 89.900 175.136 110.938 1.00 54.76 O
ATOM 2 P A B1773 89.701 173.820 110.045 1.00 53.93 P
ATOM 3 OP1 A B1773 89.304 172.738 110.983 1.00 54.11 O
ATOM 4 OP2 A B1773 90.889 173.631 109.171 1.00 51.89 O
ATOM 5 O5' A B1773 88.443 174.175 109.136 1.00 52.97 O
ATOM 6 C5' A B1773 87.100 174.113 109.659 1.00 51.63 C
ATOM 7 C4' A B1773 86.117 174.369 108.550 1.00 50.73 C
ATOM 8 O4' A B1773 86.304 175.722 108.072 1.00 49.28 O
ATOM 9 C3' A B1773 86.323 173.461 107.345 1.00 51.17 C
ATOM 10 O3' A B1773 85.476 172.321 107.455 1.00 51.81 O
ATOM 11 C2' A B1773 85.934 174.350 106.173 1.00 51.75 C
ATOM 12 O2' A B1773 84.543 174.390 105.952 1.00 53.71 O
ATOM 13 C1' A B1773 86.395 175.722 106.665 1.00 51.15 C
ATOM 14 N9 A B1773 87.766 176.081 106.304 1.00 52.36 N
ATOM 15 C8 A B1773 88.871 176.142 107.125 1.00 52.64 C
ATOM 16 N7 A B1773 89.959 176.545 106.518 1.00 52.65 N
ATOM 17 C5 A B1773 89.548 176.757 105.209 1.00 52.86 C
ATOM 18 C6 A B1773 90.230 177.206 104.072 1.00 54.09 C
ATOM 19 N6 A B1773 91.525 177.538 104.071 1.00 55.00 N
ATOM 20 N1 A B1773 89.530 177.308 102.920 1.00 54.27 N
ATOM 21 C2 A B1773 88.231 176.975 102.927 1.00 53.71 C
ATOM 22 N3 A B1773 87.479 176.543 103.933 1.00 51.44 N
ATOM 23 C4 A B1773 88.205 176.459 105.060 1.00 51.93 C
ATOM 24 P C B1774 85.971 170.888 106.930 1.00 52.58 P
ATOM 25 OP1 C B1774 84.747 170.051 106.846 1.00 52.11 O
ATOM 26 OP2 C B1774 87.106 170.446 107.773 1.00 52.21 O
ATOM 27 O5' C B1774 86.497 171.156 105.451 1.00 49.99 O
TER
Atoms:
OP1: (76.898,177.284,107.422)
OP2: (75.999,175.514,105.796)
C3': (80.328,173.568,107.830)
C1': (81.682,175.338,107.065)
C5': (78.455,174.163,106.232)
O6: (81.458,180.288,110.456)
O4': (80.659,175.137,106.104)
C8: (80.076,177.062,108.013)
C2: (84.071,178.127,109.403)
C6: (81.996,179.325,109.893)
C5: (81.395,178.319,109.108)
C4: (82.193,177.339,108.554)
P: (76.631,175.863,107.098)
C4': (79.929,173.919,106.408)
C2': (81.767,174.053,107.894)
O2': (82.646,173.141,107.268)
N1: (83.368,179.142,109.991)
N2: (85.386,178.125,109.619)
N3: (83.527,177.186,108.658)
N7: (80.065,178.129,108.762)
N9: (81.334,176.528,107.845)
O5': (78.001,175.069,107.241)
O3': (80.192,172.176,108.077)
OP2: (75.999,175.514,105.796)
C3': (80.328,173.568,107.830)
C1': (81.682,175.338,107.065)
C5': (78.455,174.163,106.232)
O6: (81.458,180.288,110.456)
O4': (80.659,175.137,106.104)
C8: (80.076,177.062,108.013)
C2: (84.071,178.127,109.403)
C6: (81.996,179.325,109.893)
C5: (81.395,178.319,109.108)
C4: (82.193,177.339,108.554)
P: (76.631,175.863,107.098)
C4': (79.929,173.919,106.408)
C2': (81.767,174.053,107.894)
O2': (82.646,173.141,107.268)
N1: (83.368,179.142,109.991)
N2: (85.386,178.125,109.619)
N3: (83.527,177.186,108.658)
N7: (80.065,178.129,108.762)
N9: (81.334,176.528,107.845)
O5': (78.001,175.069,107.241)
O3': (80.192,172.176,108.077)
OP1: (89.304,172.738,110.983)
OP2: (90.889,173.631,109.171)
C3': (86.323,173.461,107.345)
C1': (86.395,175.722,106.665)
C5': (87.100,174.113,109.659)
O4': (86.304,175.722,108.072)
C8: (88.871,176.142,107.125)
O2': (84.543,174.390,105.952)
C6: (90.230,177.206,104.072)
C5: (89.548,176.757,105.209)
C4: (88.205,176.459,105.060)
P: (89.701,173.820,110.045)
C4': (86.117,174.369,108.550)
C2': (85.934,174.350,106.173)
C2: (88.231,176.975,102.927)
N1: (89.530,177.308,102.920)
N3: (87.479,176.543,103.933)
N6: (91.525,177.538,104.071)
N7: (89.959,176.545,106.518)
N9: (87.766,176.081,106.304)
O5': (88.443,174.175,109.136)
O3': (85.476,172.321,107.455)
OP2: (90.889,173.631,109.171)
C3': (86.323,173.461,107.345)
C1': (86.395,175.722,106.665)
C5': (87.100,174.113,109.659)
O4': (86.304,175.722,108.072)
C8: (88.871,176.142,107.125)
O2': (84.543,174.390,105.952)
C6: (90.230,177.206,104.072)
C5: (89.548,176.757,105.209)
C4: (88.205,176.459,105.060)
P: (89.701,173.820,110.045)
C4': (86.117,174.369,108.550)
C2': (85.934,174.350,106.173)
C2: (88.231,176.975,102.927)
N1: (89.530,177.308,102.920)
N3: (87.479,176.543,103.933)
N6: (91.525,177.538,104.071)
N7: (89.959,176.545,106.518)
N9: (87.766,176.081,106.304)
O5': (88.443,174.175,109.136)
O3': (85.476,172.321,107.455)
Image (generated by PyMOL):