Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0998:01255
Extra
PDB:
ATOM 1 O3' G A 997 42.810 89.810 63.207 1.00 22.82 O
ATOM 2 P G A 998 43.928 90.376 64.227 1.00 23.26 P
ATOM 3 OP1 G A 998 44.751 91.347 63.458 1.00 25.35 O
ATOM 4 OP2 G A 998 44.611 89.255 64.925 1.00 18.94 O
ATOM 5 O5' G A 998 43.068 91.178 65.302 1.00 17.22 O
ATOM 6 C5' G A 998 42.355 92.364 64.923 1.00 19.85 C
ATOM 7 C4' G A 998 41.650 92.962 66.119 1.00 21.11 C
ATOM 8 O4' G A 998 40.596 92.063 66.574 1.00 22.23 O
ATOM 9 C3' G A 998 42.494 93.164 67.367 1.00 20.46 C
ATOM 10 O3' G A 998 43.345 94.302 67.292 1.00 22.27 O
ATOM 11 C2' G A 998 41.410 93.290 68.425 1.00 21.48 C
ATOM 12 O2' G A 998 40.736 94.531 68.379 1.00 21.65 O
ATOM 13 C1' G A 998 40.442 92.186 67.982 1.00 19.98 C
ATOM 14 N9 G A 998 40.843 90.933 68.620 1.00 18.64 N
ATOM 15 C8 G A 998 41.584 89.908 68.080 1.00 16.50 C
ATOM 16 N7 G A 998 41.901 88.994 68.957 1.00 16.94 N
ATOM 17 C5 G A 998 41.304 89.426 70.137 1.00 14.68 C
ATOM 18 C6 G A 998 41.334 88.873 71.438 1.00 16.67 C
ATOM 19 O6 G A 998 41.897 87.842 71.826 1.00 21.37 O
ATOM 20 N1 G A 998 40.622 89.648 72.339 1.00 15.60 N
ATOM 21 C2 G A 998 39.954 90.804 72.032 1.00 16.11 C
ATOM 22 N2 G A 998 39.306 91.412 73.042 1.00 15.85 N
ATOM 23 N3 G A 998 39.918 91.329 70.827 1.00 16.58 N
ATOM 24 C4 G A 998 40.617 90.597 69.936 1.00 15.34 C
ATOM 25 P A A 999 44.930 94.132 67.541 1.00 25.68 P
ATOM 26 OP1 A A 999 45.441 95.485 67.864 1.00 26.39 O
ATOM 27 OP2 A A 999 45.527 93.374 66.411 1.00 26.28 O
ATOM 28 O5' A A 999 45.035 93.199 68.833 1.00 24.59 O
TER
ATOM 1 O3' G B1254 40.115 97.598 73.012 1.00 21.96 O
ATOM 2 P A B1255 39.013 97.911 71.873 1.00 20.63 P
ATOM 3 OP1 A B1255 39.723 98.126 70.604 1.00 21.06 O
ATOM 4 OP2 A B1255 38.051 98.946 72.352 1.00 18.26 O
ATOM 5 O5' A B1255 38.238 96.527 71.723 1.00 25.05 O
ATOM 6 C5' A B1255 38.878 95.372 71.139 1.00 23.35 C
ATOM 7 C4' A B1255 37.915 94.205 71.117 1.00 23.95 C
ATOM 8 O4' A B1255 37.543 93.861 72.481 1.00 24.53 O
ATOM 9 C3' A B1255 36.586 94.490 70.429 1.00 22.91 C
ATOM 10 O3' A B1255 36.676 94.347 69.020 1.00 21.80 O
ATOM 11 C2' A B1255 35.659 93.476 71.086 1.00 24.08 C
ATOM 12 O2' A B1255 35.809 92.162 70.585 1.00 22.79 O
ATOM 13 C1' A B1255 36.162 93.518 72.531 1.00 24.22 C
ATOM 14 N9 A B1255 35.459 94.541 73.308 1.00 23.99 N
ATOM 15 C8 A B1255 35.877 95.814 73.616 1.00 24.40 C
ATOM 16 N7 A B1255 34.998 96.508 74.301 1.00 24.29 N
ATOM 17 C5 A B1255 33.936 95.632 74.461 1.00 23.95 C
ATOM 18 C6 A B1255 32.689 95.766 75.086 1.00 25.08 C
ATOM 19 N6 A B1255 32.288 96.873 75.709 1.00 22.93 N
ATOM 20 N1 A B1255 31.853 94.705 75.052 1.00 27.36 N
ATOM 21 C2 A B1255 32.260 93.589 74.441 1.00 25.58 C
ATOM 22 N3 A B1255 33.408 93.339 73.825 1.00 25.39 N
ATOM 23 C4 A B1255 34.210 94.415 73.864 1.00 23.84 C
ATOM 24 P U B1256 35.726 95.226 68.070 1.00 26.27 P
ATOM 25 OP1 U B1256 36.070 94.840 66.676 1.00 23.61 O
ATOM 26 OP2 U B1256 35.750 96.653 68.472 1.00 23.07 O
ATOM 27 O5' U B1256 34.259 94.703 68.387 1.00 27.65 O
TER
ATOM 2 P G A 998 43.928 90.376 64.227 1.00 23.26 P
ATOM 3 OP1 G A 998 44.751 91.347 63.458 1.00 25.35 O
ATOM 4 OP2 G A 998 44.611 89.255 64.925 1.00 18.94 O
ATOM 5 O5' G A 998 43.068 91.178 65.302 1.00 17.22 O
ATOM 6 C5' G A 998 42.355 92.364 64.923 1.00 19.85 C
ATOM 7 C4' G A 998 41.650 92.962 66.119 1.00 21.11 C
ATOM 8 O4' G A 998 40.596 92.063 66.574 1.00 22.23 O
ATOM 9 C3' G A 998 42.494 93.164 67.367 1.00 20.46 C
ATOM 10 O3' G A 998 43.345 94.302 67.292 1.00 22.27 O
ATOM 11 C2' G A 998 41.410 93.290 68.425 1.00 21.48 C
ATOM 12 O2' G A 998 40.736 94.531 68.379 1.00 21.65 O
ATOM 13 C1' G A 998 40.442 92.186 67.982 1.00 19.98 C
ATOM 14 N9 G A 998 40.843 90.933 68.620 1.00 18.64 N
ATOM 15 C8 G A 998 41.584 89.908 68.080 1.00 16.50 C
ATOM 16 N7 G A 998 41.901 88.994 68.957 1.00 16.94 N
ATOM 17 C5 G A 998 41.304 89.426 70.137 1.00 14.68 C
ATOM 18 C6 G A 998 41.334 88.873 71.438 1.00 16.67 C
ATOM 19 O6 G A 998 41.897 87.842 71.826 1.00 21.37 O
ATOM 20 N1 G A 998 40.622 89.648 72.339 1.00 15.60 N
ATOM 21 C2 G A 998 39.954 90.804 72.032 1.00 16.11 C
ATOM 22 N2 G A 998 39.306 91.412 73.042 1.00 15.85 N
ATOM 23 N3 G A 998 39.918 91.329 70.827 1.00 16.58 N
ATOM 24 C4 G A 998 40.617 90.597 69.936 1.00 15.34 C
ATOM 25 P A A 999 44.930 94.132 67.541 1.00 25.68 P
ATOM 26 OP1 A A 999 45.441 95.485 67.864 1.00 26.39 O
ATOM 27 OP2 A A 999 45.527 93.374 66.411 1.00 26.28 O
ATOM 28 O5' A A 999 45.035 93.199 68.833 1.00 24.59 O
TER
ATOM 1 O3' G B1254 40.115 97.598 73.012 1.00 21.96 O
ATOM 2 P A B1255 39.013 97.911 71.873 1.00 20.63 P
ATOM 3 OP1 A B1255 39.723 98.126 70.604 1.00 21.06 O
ATOM 4 OP2 A B1255 38.051 98.946 72.352 1.00 18.26 O
ATOM 5 O5' A B1255 38.238 96.527 71.723 1.00 25.05 O
ATOM 6 C5' A B1255 38.878 95.372 71.139 1.00 23.35 C
ATOM 7 C4' A B1255 37.915 94.205 71.117 1.00 23.95 C
ATOM 8 O4' A B1255 37.543 93.861 72.481 1.00 24.53 O
ATOM 9 C3' A B1255 36.586 94.490 70.429 1.00 22.91 C
ATOM 10 O3' A B1255 36.676 94.347 69.020 1.00 21.80 O
ATOM 11 C2' A B1255 35.659 93.476 71.086 1.00 24.08 C
ATOM 12 O2' A B1255 35.809 92.162 70.585 1.00 22.79 O
ATOM 13 C1' A B1255 36.162 93.518 72.531 1.00 24.22 C
ATOM 14 N9 A B1255 35.459 94.541 73.308 1.00 23.99 N
ATOM 15 C8 A B1255 35.877 95.814 73.616 1.00 24.40 C
ATOM 16 N7 A B1255 34.998 96.508 74.301 1.00 24.29 N
ATOM 17 C5 A B1255 33.936 95.632 74.461 1.00 23.95 C
ATOM 18 C6 A B1255 32.689 95.766 75.086 1.00 25.08 C
ATOM 19 N6 A B1255 32.288 96.873 75.709 1.00 22.93 N
ATOM 20 N1 A B1255 31.853 94.705 75.052 1.00 27.36 N
ATOM 21 C2 A B1255 32.260 93.589 74.441 1.00 25.58 C
ATOM 22 N3 A B1255 33.408 93.339 73.825 1.00 25.39 N
ATOM 23 C4 A B1255 34.210 94.415 73.864 1.00 23.84 C
ATOM 24 P U B1256 35.726 95.226 68.070 1.00 26.27 P
ATOM 25 OP1 U B1256 36.070 94.840 66.676 1.00 23.61 O
ATOM 26 OP2 U B1256 35.750 96.653 68.472 1.00 23.07 O
ATOM 27 O5' U B1256 34.259 94.703 68.387 1.00 27.65 O
TER
Atoms:
OP1: (44.751,91.347,63.458)
OP2: (44.611,89.255,64.925)
C3': (42.494,93.164,67.367)
C1': (40.442,92.186,67.982)
C5': (42.355,92.364,64.923)
O6: (41.897,87.842,71.826)
O4': (40.596,92.063,66.574)
C8: (41.584,89.908,68.080)
C2: (39.954,90.804,72.032)
C6: (41.334,88.873,71.438)
C5: (41.304,89.426,70.137)
C4: (40.617,90.597,69.936)
P: (43.928,90.376,64.227)
C4': (41.650,92.962,66.119)
C2': (41.410,93.290,68.425)
O2': (40.736,94.531,68.379)
N1: (40.622,89.648,72.339)
N2: (39.306,91.412,73.042)
N3: (39.918,91.329,70.827)
N7: (41.901,88.994,68.957)
N9: (40.843,90.933,68.620)
O5': (43.068,91.178,65.302)
O3': (43.345,94.302,67.292)
OP2: (44.611,89.255,64.925)
C3': (42.494,93.164,67.367)
C1': (40.442,92.186,67.982)
C5': (42.355,92.364,64.923)
O6: (41.897,87.842,71.826)
O4': (40.596,92.063,66.574)
C8: (41.584,89.908,68.080)
C2: (39.954,90.804,72.032)
C6: (41.334,88.873,71.438)
C5: (41.304,89.426,70.137)
C4: (40.617,90.597,69.936)
P: (43.928,90.376,64.227)
C4': (41.650,92.962,66.119)
C2': (41.410,93.290,68.425)
O2': (40.736,94.531,68.379)
N1: (40.622,89.648,72.339)
N2: (39.306,91.412,73.042)
N3: (39.918,91.329,70.827)
N7: (41.901,88.994,68.957)
N9: (40.843,90.933,68.620)
O5': (43.068,91.178,65.302)
O3': (43.345,94.302,67.292)
OP1: (39.723,98.126,70.604)
OP2: (38.051,98.946,72.352)
C3': (36.586,94.490,70.429)
C1': (36.162,93.518,72.531)
C5': (38.878,95.372,71.139)
O4': (37.543,93.861,72.481)
C8: (35.877,95.814,73.616)
O2': (35.809,92.162,70.585)
C6: (32.689,95.766,75.086)
C5: (33.936,95.632,74.461)
C4: (34.210,94.415,73.864)
P: (39.013,97.911,71.873)
C4': (37.915,94.205,71.117)
C2': (35.659,93.476,71.086)
C2: (32.260,93.589,74.441)
N1: (31.853,94.705,75.052)
N3: (33.408,93.339,73.825)
N6: (32.288,96.873,75.709)
N7: (34.998,96.508,74.301)
N9: (35.459,94.541,73.308)
O5': (38.238,96.527,71.723)
O3': (36.676,94.347,69.020)
OP2: (38.051,98.946,72.352)
C3': (36.586,94.490,70.429)
C1': (36.162,93.518,72.531)
C5': (38.878,95.372,71.139)
O4': (37.543,93.861,72.481)
C8: (35.877,95.814,73.616)
O2': (35.809,92.162,70.585)
C6: (32.689,95.766,75.086)
C5: (33.936,95.632,74.461)
C4: (34.210,94.415,73.864)
P: (39.013,97.911,71.873)
C4': (37.915,94.205,71.117)
C2': (35.659,93.476,71.086)
C2: (32.260,93.589,74.441)
N1: (31.853,94.705,75.052)
N3: (33.408,93.339,73.825)
N6: (32.288,96.873,75.709)
N7: (34.998,96.508,74.301)
N9: (35.459,94.541,73.308)
O5': (38.238,96.527,71.723)
O3': (36.676,94.347,69.020)
Image (generated by PyMOL):