Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1017:A1137
Extra
PDB:
ATOM 1 O3' U A1016 -105.078 -83.519 -24.825 1.00 0.01 O
ATOM 2 P G A1017 -104.386 -83.730 -23.415 1.00 0.01 P
ATOM 3 OP1 G A1017 -105.069 -82.851 -22.447 1.00 0.01 O
ATOM 4 OP2 G A1017 -102.942 -83.569 -23.619 1.00 0.01 O
ATOM 5 O5' G A1017 -104.708 -85.225 -23.095 1.00 0.01 O
ATOM 6 C5' G A1017 -105.948 -85.568 -22.576 1.00 0.01 C
ATOM 7 C4' G A1017 -105.988 -87.008 -22.250 1.00 0.01 C
ATOM 8 O4' G A1017 -105.731 -87.787 -23.435 1.00 0.01 O
ATOM 9 C3' G A1017 -104.938 -87.475 -21.302 1.00 0.01 C
ATOM 10 O3' G A1017 -105.214 -87.108 -19.968 1.00 0.01 O
ATOM 11 C2' G A1017 -104.973 -88.962 -21.563 1.00 0.01 C
ATOM 12 O2' G A1017 -106.162 -89.527 -21.032 1.00 0.01 O
ATOM 13 C1' G A1017 -105.083 -88.969 -23.082 1.00 0.01 C
ATOM 14 N9 G A1017 -103.771 -88.986 -23.751 1.00 0.01 N
ATOM 15 C8 G A1017 -103.072 -87.868 -24.081 1.00 0.01 C
ATOM 16 N7 G A1017 -101.930 -88.067 -24.672 1.00 0.01 N
ATOM 17 C5 G A1017 -101.899 -89.425 -24.750 1.00 0.01 C
ATOM 18 C6 G A1017 -100.891 -90.212 -25.325 1.00 0.01 C
ATOM 19 O6 G A1017 -99.851 -89.789 -25.850 1.00 0.01 O
ATOM 20 N1 G A1017 -101.190 -91.570 -25.250 1.00 0.01 N
ATOM 21 C2 G A1017 -102.320 -92.089 -24.695 1.00 0.01 C
ATOM 22 N2 G A1017 -102.408 -93.417 -24.723 1.00 0.01 N
ATOM 23 N3 G A1017 -103.265 -91.349 -24.150 1.00 0.01 N
ATOM 24 C4 G A1017 -103.006 -90.023 -24.208 1.00 0.01 C
ATOM 25 P G A1018 -104.149 -87.384 -18.810 1.00 0.01 P
ATOM 26 OP1 G A1018 -103.903 -88.829 -18.791 1.00 0.01 O
ATOM 27 OP2 G A1018 -104.667 -86.740 -17.599 1.00 0.01 O
ATOM 28 O5' G A1018 -102.848 -86.642 -19.316 1.00 0.01 O
TER
ATOM 1 O3' A B1136 -103.079 -98.016 -21.998 1.00 0.01 O
ATOM 2 P A B1137 -104.319 -97.441 -21.111 1.00 0.01 P
ATOM 3 OP1 A B1137 -103.786 -97.090 -19.786 1.00 0.01 O
ATOM 4 OP2 A B1137 -105.407 -98.421 -21.178 1.00 0.01 O
ATOM 5 O5' A B1137 -104.746 -96.122 -21.889 1.00 0.01 O
ATOM 6 C5' A B1137 -104.168 -94.860 -21.585 1.00 0.01 C
ATOM 7 C4' A B1137 -104.971 -93.723 -22.172 1.00 0.01 C
ATOM 8 O4' A B1137 -105.082 -93.898 -23.597 1.00 0.01 O
ATOM 9 C3' A B1137 -106.413 -93.606 -21.696 1.00 0.01 C
ATOM 10 O3' A B1137 -106.542 -92.885 -20.482 1.00 0.01 O
ATOM 11 C2' A B1137 -107.103 -92.937 -22.862 1.00 0.01 C
ATOM 12 O2' A B1137 -106.865 -91.557 -22.852 1.00 0.01 O
ATOM 13 C1' A B1137 -106.366 -93.543 -24.034 1.00 0.01 C
ATOM 14 N9 A B1137 -107.045 -94.754 -24.529 1.00 0.01 N
ATOM 15 C8 A B1137 -106.685 -96.077 -24.502 1.00 0.01 C
ATOM 16 N7 A B1137 -107.555 -96.891 -25.045 1.00 0.01 N
ATOM 17 C5 A B1137 -108.548 -96.029 -25.453 1.00 0.01 C
ATOM 18 C6 A B1137 -109.757 -96.231 -26.095 1.00 0.01 C
ATOM 19 N6 A B1137 -110.213 -97.432 -26.471 1.00 0.01 N
ATOM 20 N1 A B1137 -110.507 -95.146 -26.348 1.00 0.01 N
ATOM 21 C2 A B1137 -110.081 -93.949 -25.997 1.00 0.01 C
ATOM 22 N3 A B1137 -108.963 -93.622 -25.399 1.00 0.01 N
ATOM 23 C4 A B1137 -108.250 -94.727 -25.153 1.00 0.01 C
ATOM 24 P C B1138 -107.445 -93.464 -19.296 1.00 0.01 P
ATOM 25 OP1 C B1138 -107.042 -92.757 -18.073 1.00 0.01 O
ATOM 26 OP2 C B1138 -107.335 -94.941 -19.343 1.00 0.01 O
ATOM 27 O5' C B1138 -108.905 -93.025 -19.715 1.00 0.01 O
TER
ATOM 2 P G A1017 -104.386 -83.730 -23.415 1.00 0.01 P
ATOM 3 OP1 G A1017 -105.069 -82.851 -22.447 1.00 0.01 O
ATOM 4 OP2 G A1017 -102.942 -83.569 -23.619 1.00 0.01 O
ATOM 5 O5' G A1017 -104.708 -85.225 -23.095 1.00 0.01 O
ATOM 6 C5' G A1017 -105.948 -85.568 -22.576 1.00 0.01 C
ATOM 7 C4' G A1017 -105.988 -87.008 -22.250 1.00 0.01 C
ATOM 8 O4' G A1017 -105.731 -87.787 -23.435 1.00 0.01 O
ATOM 9 C3' G A1017 -104.938 -87.475 -21.302 1.00 0.01 C
ATOM 10 O3' G A1017 -105.214 -87.108 -19.968 1.00 0.01 O
ATOM 11 C2' G A1017 -104.973 -88.962 -21.563 1.00 0.01 C
ATOM 12 O2' G A1017 -106.162 -89.527 -21.032 1.00 0.01 O
ATOM 13 C1' G A1017 -105.083 -88.969 -23.082 1.00 0.01 C
ATOM 14 N9 G A1017 -103.771 -88.986 -23.751 1.00 0.01 N
ATOM 15 C8 G A1017 -103.072 -87.868 -24.081 1.00 0.01 C
ATOM 16 N7 G A1017 -101.930 -88.067 -24.672 1.00 0.01 N
ATOM 17 C5 G A1017 -101.899 -89.425 -24.750 1.00 0.01 C
ATOM 18 C6 G A1017 -100.891 -90.212 -25.325 1.00 0.01 C
ATOM 19 O6 G A1017 -99.851 -89.789 -25.850 1.00 0.01 O
ATOM 20 N1 G A1017 -101.190 -91.570 -25.250 1.00 0.01 N
ATOM 21 C2 G A1017 -102.320 -92.089 -24.695 1.00 0.01 C
ATOM 22 N2 G A1017 -102.408 -93.417 -24.723 1.00 0.01 N
ATOM 23 N3 G A1017 -103.265 -91.349 -24.150 1.00 0.01 N
ATOM 24 C4 G A1017 -103.006 -90.023 -24.208 1.00 0.01 C
ATOM 25 P G A1018 -104.149 -87.384 -18.810 1.00 0.01 P
ATOM 26 OP1 G A1018 -103.903 -88.829 -18.791 1.00 0.01 O
ATOM 27 OP2 G A1018 -104.667 -86.740 -17.599 1.00 0.01 O
ATOM 28 O5' G A1018 -102.848 -86.642 -19.316 1.00 0.01 O
TER
ATOM 1 O3' A B1136 -103.079 -98.016 -21.998 1.00 0.01 O
ATOM 2 P A B1137 -104.319 -97.441 -21.111 1.00 0.01 P
ATOM 3 OP1 A B1137 -103.786 -97.090 -19.786 1.00 0.01 O
ATOM 4 OP2 A B1137 -105.407 -98.421 -21.178 1.00 0.01 O
ATOM 5 O5' A B1137 -104.746 -96.122 -21.889 1.00 0.01 O
ATOM 6 C5' A B1137 -104.168 -94.860 -21.585 1.00 0.01 C
ATOM 7 C4' A B1137 -104.971 -93.723 -22.172 1.00 0.01 C
ATOM 8 O4' A B1137 -105.082 -93.898 -23.597 1.00 0.01 O
ATOM 9 C3' A B1137 -106.413 -93.606 -21.696 1.00 0.01 C
ATOM 10 O3' A B1137 -106.542 -92.885 -20.482 1.00 0.01 O
ATOM 11 C2' A B1137 -107.103 -92.937 -22.862 1.00 0.01 C
ATOM 12 O2' A B1137 -106.865 -91.557 -22.852 1.00 0.01 O
ATOM 13 C1' A B1137 -106.366 -93.543 -24.034 1.00 0.01 C
ATOM 14 N9 A B1137 -107.045 -94.754 -24.529 1.00 0.01 N
ATOM 15 C8 A B1137 -106.685 -96.077 -24.502 1.00 0.01 C
ATOM 16 N7 A B1137 -107.555 -96.891 -25.045 1.00 0.01 N
ATOM 17 C5 A B1137 -108.548 -96.029 -25.453 1.00 0.01 C
ATOM 18 C6 A B1137 -109.757 -96.231 -26.095 1.00 0.01 C
ATOM 19 N6 A B1137 -110.213 -97.432 -26.471 1.00 0.01 N
ATOM 20 N1 A B1137 -110.507 -95.146 -26.348 1.00 0.01 N
ATOM 21 C2 A B1137 -110.081 -93.949 -25.997 1.00 0.01 C
ATOM 22 N3 A B1137 -108.963 -93.622 -25.399 1.00 0.01 N
ATOM 23 C4 A B1137 -108.250 -94.727 -25.153 1.00 0.01 C
ATOM 24 P C B1138 -107.445 -93.464 -19.296 1.00 0.01 P
ATOM 25 OP1 C B1138 -107.042 -92.757 -18.073 1.00 0.01 O
ATOM 26 OP2 C B1138 -107.335 -94.941 -19.343 1.00 0.01 O
ATOM 27 O5' C B1138 -108.905 -93.025 -19.715 1.00 0.01 O
TER
Atoms:
OP1: (-105.069,-82.851,-22.447)
OP2: (-102.942,-83.569,-23.619)
C3': (-104.938,-87.475,-21.302)
C1': (-105.083,-88.969,-23.082)
C5': (-105.948,-85.568,-22.576)
O6: (-99.851,-89.789,-25.850)
O4': (-105.731,-87.787,-23.435)
C8: (-103.072,-87.868,-24.081)
C2: (-102.320,-92.089,-24.695)
C6: (-100.891,-90.212,-25.325)
C5: (-101.899,-89.425,-24.750)
C4: (-103.006,-90.023,-24.208)
P: (-104.386,-83.730,-23.415)
C4': (-105.988,-87.008,-22.250)
C2': (-104.973,-88.962,-21.563)
O2': (-106.162,-89.527,-21.032)
N1: (-101.190,-91.570,-25.250)
N2: (-102.408,-93.417,-24.723)
N3: (-103.265,-91.349,-24.150)
N7: (-101.930,-88.067,-24.672)
N9: (-103.771,-88.986,-23.751)
O5': (-104.708,-85.225,-23.095)
O3': (-105.214,-87.108,-19.968)
OP2: (-102.942,-83.569,-23.619)
C3': (-104.938,-87.475,-21.302)
C1': (-105.083,-88.969,-23.082)
C5': (-105.948,-85.568,-22.576)
O6: (-99.851,-89.789,-25.850)
O4': (-105.731,-87.787,-23.435)
C8: (-103.072,-87.868,-24.081)
C2: (-102.320,-92.089,-24.695)
C6: (-100.891,-90.212,-25.325)
C5: (-101.899,-89.425,-24.750)
C4: (-103.006,-90.023,-24.208)
P: (-104.386,-83.730,-23.415)
C4': (-105.988,-87.008,-22.250)
C2': (-104.973,-88.962,-21.563)
O2': (-106.162,-89.527,-21.032)
N1: (-101.190,-91.570,-25.250)
N2: (-102.408,-93.417,-24.723)
N3: (-103.265,-91.349,-24.150)
N7: (-101.930,-88.067,-24.672)
N9: (-103.771,-88.986,-23.751)
O5': (-104.708,-85.225,-23.095)
O3': (-105.214,-87.108,-19.968)
OP1: (-103.786,-97.090,-19.786)
OP2: (-105.407,-98.421,-21.178)
C3': (-106.413,-93.606,-21.696)
C1': (-106.366,-93.543,-24.034)
C5': (-104.168,-94.860,-21.585)
O4': (-105.082,-93.898,-23.597)
C8: (-106.685,-96.077,-24.502)
O2': (-106.865,-91.557,-22.852)
C6: (-109.757,-96.231,-26.095)
C5: (-108.548,-96.029,-25.453)
C4: (-108.250,-94.727,-25.153)
P: (-104.319,-97.441,-21.111)
C4': (-104.971,-93.723,-22.172)
C2': (-107.103,-92.937,-22.862)
C2: (-110.081,-93.949,-25.997)
N1: (-110.507,-95.146,-26.348)
N3: (-108.963,-93.622,-25.399)
N6: (-110.213,-97.432,-26.471)
N7: (-107.555,-96.891,-25.045)
N9: (-107.045,-94.754,-24.529)
O5': (-104.746,-96.122,-21.889)
O3': (-106.542,-92.885,-20.482)
OP2: (-105.407,-98.421,-21.178)
C3': (-106.413,-93.606,-21.696)
C1': (-106.366,-93.543,-24.034)
C5': (-104.168,-94.860,-21.585)
O4': (-105.082,-93.898,-23.597)
C8: (-106.685,-96.077,-24.502)
O2': (-106.865,-91.557,-22.852)
C6: (-109.757,-96.231,-26.095)
C5: (-108.548,-96.029,-25.453)
C4: (-108.250,-94.727,-25.153)
P: (-104.319,-97.441,-21.111)
C4': (-104.971,-93.723,-22.172)
C2': (-107.103,-92.937,-22.862)
C2: (-110.081,-93.949,-25.997)
N1: (-110.507,-95.146,-26.348)
N3: (-108.963,-93.622,-25.399)
N6: (-110.213,-97.432,-26.471)
N7: (-107.555,-96.891,-25.045)
N9: (-107.045,-94.754,-24.529)
O5': (-104.746,-96.122,-21.889)
O3': (-106.542,-92.885,-20.482)
Image (generated by PyMOL):