ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A375:A2110

Extra

PDB:
ATOM 1 O3' G A 374 95.766 92.158 40.219 1.00 57.62 O
ATOM 2 P G A 375 94.698 92.593 41.350 1.00 56.48 P
ATOM 3 OP1 G A 375 94.678 91.558 42.414 1.00 54.82 O
ATOM 4 OP2 G A 375 93.434 92.969 40.673 1.00 55.55 O
ATOM 5 O5' G A 375 95.296 93.945 41.954 1.00 57.13 O
ATOM 6 C5' G A 375 96.660 93.986 42.446 1.00 56.42 C
ATOM 7 C4' G A 375 97.063 95.384 42.907 1.00 56.23 C
ATOM 8 O4' G A 375 97.320 96.282 41.787 1.00 56.76 O
ATOM 9 C3' G A 375 96.085 96.185 43.738 1.00 55.57 C
ATOM 10 O3' G A 375 95.908 95.710 45.054 1.00 53.86 O
ATOM 11 C2' G A 375 96.690 97.583 43.665 1.00 55.65 C
ATOM 12 O2' G A 375 97.848 97.825 44.449 1.00 58.62 O
ATOM 13 C1' G A 375 97.074 97.631 42.195 1.00 55.60 C
ATOM 14 N9 G A 375 95.930 98.143 41.450 1.00 54.40 N
ATOM 15 C8 G A 375 94.990 97.413 40.767 1.00 53.28 C
ATOM 16 N7 G A 375 94.086 98.158 40.189 1.00 53.79 N
ATOM 17 C5 G A 375 94.448 99.456 40.509 1.00 53.70 C
ATOM 18 C6 G A 375 93.854 100.685 40.140 1.00 53.63 C
ATOM 19 O6 G A 375 92.898 100.887 39.384 1.00 52.93 O
ATOM 20 N1 G A 375 94.510 101.755 40.721 1.00 54.98 N
ATOM 21 C2 G A 375 95.626 101.663 41.521 1.00 55.40 C
ATOM 22 N2 G A 375 96.104 102.820 42.019 1.00 56.27 N
ATOM 23 N3 G A 375 96.225 100.524 41.825 1.00 54.37 N
ATOM 24 C4 G A 375 95.578 99.466 41.299 1.00 54.15 C
ATOM 25 P G A 376 94.437 95.783 45.713 1.00 52.22 P
ATOM 26 OP1 G A 376 94.505 95.199 47.075 1.00 50.14 O
ATOM 27 OP2 G A 376 93.463 95.244 44.723 1.00 49.10 O
ATOM 28 O5' G A 376 94.178 97.353 45.837 1.00 51.15 O
TER

ATOM 1 O3' G B2109 98.276 110.868 42.957 1.00 56.77 O
ATOM 2 P A B2110 97.743 110.089 44.287 1.00 57.06 P
ATOM 3 OP1 A B2110 96.263 110.115 44.286 1.00 56.11 O
ATOM 4 OP2 A B2110 98.468 110.620 45.472 1.00 57.27 O
ATOM 5 O5' A B2110 98.149 108.571 44.031 1.00 56.90 O
ATOM 6 C5' A B2110 97.504 107.799 42.985 1.00 57.05 C
ATOM 7 C4' A B2110 98.116 106.418 42.908 1.00 56.91 C
ATOM 8 O4' A B2110 99.499 106.569 42.480 1.00 58.07 O
ATOM 9 C3' A B2110 98.186 105.567 44.180 1.00 56.66 C
ATOM 10 O3' A B2110 96.954 104.852 44.446 1.00 56.28 O
ATOM 11 C2' A B2110 99.339 104.619 43.848 1.00 57.25 C
ATOM 12 O2' A B2110 98.960 103.491 43.090 1.00 58.38 O
ATOM 13 C1' A B2110 100.273 105.509 43.012 1.00 57.53 C
ATOM 14 N9 A B2110 101.380 106.055 43.799 1.00 56.68 N
ATOM 15 C8 A B2110 101.568 107.351 44.231 1.00 57.89 C
ATOM 16 N7 A B2110 102.629 107.505 44.989 1.00 58.59 N
ATOM 17 C5 A B2110 103.191 106.230 45.047 1.00 56.58 C
ATOM 18 C6 A B2110 104.344 105.724 45.697 1.00 54.45 C
ATOM 19 N6 A B2110 105.168 106.468 46.430 1.00 53.67 N
ATOM 20 N1 A B2110 104.622 104.420 45.555 1.00 53.50 N
ATOM 21 C2 A B2110 103.813 103.677 44.797 1.00 53.34 C
ATOM 22 N3 A B2110 102.707 104.030 44.125 1.00 54.19 N
ATOM 23 C4 A B2110 102.444 105.335 44.299 1.00 55.81 C
ATOM 24 P U B2111 96.442 104.569 45.975 1.00 54.88 P
ATOM 25 OP1 U B2111 95.031 104.125 45.849 1.00 55.33 O
ATOM 26 OP2 U B2111 96.757 105.713 46.883 1.00 56.82 O
ATOM 27 O5' U B2111 97.264 103.290 46.437 1.00 54.24 O
TER

Atoms:
OP1: (94.678,91.558,42.414)
OP2: (93.434,92.969,40.673)
C3': (96.085,96.185,43.738)
C1': (97.074,97.631,42.195)
C5': (96.660,93.986,42.446)
O6: (92.898,100.887,39.384)
O4': (97.320,96.282,41.787)
C8: (94.990,97.413,40.767)
C2: (95.626,101.663,41.521)
C6: (93.854,100.685,40.140)
C5: (94.448,99.456,40.509)
C4: (95.578,99.466,41.299)
P: (94.698,92.593,41.350)
C4': (97.063,95.384,42.907)
C2': (96.690,97.583,43.665)
O2': (97.848,97.825,44.449)
N1: (94.510,101.755,40.721)
N2: (96.104,102.820,42.019)
N3: (96.225,100.524,41.825)
N7: (94.086,98.158,40.189)
N9: (95.930,98.143,41.450)
O5': (95.296,93.945,41.954)
O3': (95.908,95.710,45.054)
OP1: (96.263,110.115,44.286)
OP2: (98.468,110.620,45.472)
C3': (98.186,105.567,44.180)
C1': (100.273,105.509,43.012)
C5': (97.504,107.799,42.985)
O4': (99.499,106.569,42.480)
C8: (101.568,107.351,44.231)
O2': (98.960,103.491,43.090)
C6: (104.344,105.724,45.697)
C5: (103.191,106.230,45.047)
C4: (102.444,105.335,44.299)
P: (97.743,110.089,44.287)
C4': (98.116,106.418,42.908)
C2': (99.339,104.619,43.848)
C2: (103.813,103.677,44.797)
N1: (104.622,104.420,45.555)
N3: (102.707,104.030,44.125)
N6: (105.168,106.468,46.430)
N7: (102.629,107.505,44.989)
N9: (101.380,106.055,43.799)
O5': (98.149,108.571,44.031)
O3': (96.954,104.852,44.446)
Image (generated by PyMOL):
PyMOL image
show in jmol