ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0998:01255

Extra

PDB:
ATOM 1 O3' G A 997 42.793 90.108 63.251 1.00 35.75 O
ATOM 2 P G A 998 43.922 90.654 64.262 1.00 37.21 P
ATOM 3 OP1 G A 998 44.748 91.613 63.504 1.00 35.59 O
ATOM 4 OP2 G A 998 44.581 89.507 64.948 1.00 34.18 O
ATOM 5 O5' G A 998 43.084 91.455 65.353 1.00 34.96 O
ATOM 6 C5' G A 998 42.346 92.629 64.986 1.00 34.74 C
ATOM 7 C4' G A 998 41.652 93.216 66.192 1.00 35.24 C
ATOM 8 O4' G A 998 40.615 92.310 66.661 1.00 36.26 O
ATOM 9 C3' G A 998 42.500 93.428 67.438 1.00 34.37 C
ATOM 10 O3' G A 998 43.340 94.567 67.361 1.00 35.09 O
ATOM 11 C2' G A 998 41.421 93.569 68.493 1.00 33.28 C
ATOM 12 O2' G A 998 40.767 94.815 68.396 1.00 31.96 O
ATOM 13 C1' G A 998 40.467 92.449 68.066 1.00 33.05 C
ATOM 14 N9 G A 998 40.914 91.215 68.702 1.00 31.66 N
ATOM 15 C8 G A 998 41.683 90.211 68.158 1.00 28.90 C
ATOM 16 N7 G A 998 42.011 89.293 69.030 1.00 26.47 N
ATOM 17 C5 G A 998 41.397 89.704 70.210 1.00 26.56 C
ATOM 18 C6 G A 998 41.420 89.134 71.502 1.00 27.35 C
ATOM 19 O6 G A 998 41.987 88.105 71.878 1.00 31.41 O
ATOM 20 N1 G A 998 40.692 89.892 72.409 1.00 27.33 N
ATOM 21 C2 G A 998 40.020 91.048 72.110 1.00 28.29 C
ATOM 22 N2 G A 998 39.365 91.644 73.123 1.00 28.56 N
ATOM 23 N3 G A 998 39.988 91.587 70.909 1.00 27.63 N
ATOM 24 C4 G A 998 40.698 90.871 70.017 1.00 28.27 C
ATOM 25 P A A 999 44.923 94.390 67.559 1.00 35.07 P
ATOM 26 OP1 A A 999 45.465 95.733 67.868 1.00 37.48 O
ATOM 27 OP2 A A 999 45.456 93.629 66.402 1.00 40.09 O
ATOM 28 O5' A A 999 45.057 93.443 68.837 1.00 38.04 O
TER

ATOM 1 O3' G B1254 40.218 97.919 73.072 1.00 31.12 O
ATOM 2 P A B1255 39.135 98.167 71.896 1.00 30.44 P
ATOM 3 OP1 A B1255 39.905 98.332 70.639 1.00 29.88 O
ATOM 4 OP2 A B1255 38.146 99.195 72.280 1.00 29.35 O
ATOM 5 O5' A B1255 38.338 96.787 71.794 1.00 32.73 O
ATOM 6 C5' A B1255 38.936 95.612 71.214 1.00 32.09 C
ATOM 7 C4' A B1255 37.939 94.467 71.206 1.00 36.27 C
ATOM 8 O4' A B1255 37.585 94.104 72.572 1.00 34.95 O
ATOM 9 C3' A B1255 36.598 94.752 70.538 1.00 34.90 C
ATOM 10 O3' A B1255 36.662 94.606 69.124 1.00 34.22 O
ATOM 11 C2' A B1255 35.689 93.725 71.200 1.00 35.75 C
ATOM 12 O2' A B1255 35.864 92.413 70.699 1.00 33.83 O
ATOM 13 C1' A B1255 36.202 93.773 72.640 1.00 34.47 C
ATOM 14 N9 A B1255 35.512 94.809 73.414 1.00 32.53 N
ATOM 15 C8 A B1255 35.954 96.074 73.730 1.00 31.64 C
ATOM 16 N7 A B1255 35.085 96.783 74.415 1.00 30.70 N
ATOM 17 C5 A B1255 34.006 95.928 74.571 1.00 30.79 C
ATOM 18 C6 A B1255 32.764 96.085 75.201 1.00 31.55 C
ATOM 19 N6 A B1255 32.387 97.197 75.827 1.00 32.52 N
ATOM 20 N1 A B1255 31.904 95.043 75.164 1.00 33.78 N
ATOM 21 C2 A B1255 32.285 93.921 74.537 1.00 31.93 C
ATOM 22 N3 A B1255 33.428 93.652 73.913 1.00 29.75 N
ATOM 23 C4 A B1255 34.253 94.708 73.961 1.00 31.21 C
ATOM 24 P U B1256 35.756 95.548 68.181 1.00 35.98 P
ATOM 25 OP1 U B1256 36.207 95.244 66.805 1.00 36.86 O
ATOM 26 OP2 U B1256 35.782 96.956 68.666 1.00 35.72 O
ATOM 27 O5' U B1256 34.268 95.027 68.398 1.00 35.13 O
TER

Atoms:
OP1: (44.748,91.613,63.504)
OP2: (44.581,89.507,64.948)
C3': (42.500,93.428,67.438)
C1': (40.467,92.449,68.066)
C5': (42.346,92.629,64.986)
O6: (41.987,88.105,71.878)
O4': (40.615,92.310,66.661)
C8: (41.683,90.211,68.158)
C2: (40.020,91.048,72.110)
C6: (41.420,89.134,71.502)
C5: (41.397,89.704,70.210)
C4: (40.698,90.871,70.017)
P: (43.922,90.654,64.262)
C4': (41.652,93.216,66.192)
C2': (41.421,93.569,68.493)
O2': (40.767,94.815,68.396)
N1: (40.692,89.892,72.409)
N2: (39.365,91.644,73.123)
N3: (39.988,91.587,70.909)
N7: (42.011,89.293,69.030)
N9: (40.914,91.215,68.702)
O5': (43.084,91.455,65.353)
O3': (43.340,94.567,67.361)
OP1: (39.905,98.332,70.639)
OP2: (38.146,99.195,72.280)
C3': (36.598,94.752,70.538)
C1': (36.202,93.773,72.640)
C5': (38.936,95.612,71.214)
O4': (37.585,94.104,72.572)
C8: (35.954,96.074,73.730)
O2': (35.864,92.413,70.699)
C6: (32.764,96.085,75.201)
C5: (34.006,95.928,74.571)
C4: (34.253,94.708,73.961)
P: (39.135,98.167,71.896)
C4': (37.939,94.467,71.206)
C2': (35.689,93.725,71.200)
C2: (32.285,93.921,74.537)
N1: (31.904,95.043,75.164)
N3: (33.428,93.652,73.913)
N6: (32.387,97.197,75.827)
N7: (35.085,96.783,74.415)
N9: (35.512,94.809,73.414)
O5': (38.338,96.787,71.794)
O3': (36.662,94.606,69.124)
Image (generated by PyMOL):
PyMOL image
show in jmol