ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0998:01255

Extra

PDB:
ATOM 1 O3' G A 997 42.881 90.303 63.207 1.00 28.69 O
ATOM 2 P G A 998 43.957 90.880 64.252 1.00 30.08 P
ATOM 3 OP1 G A 998 44.769 91.896 63.538 1.00 32.22 O
ATOM 4 OP2 G A 998 44.637 89.747 64.920 1.00 30.80 O
ATOM 5 O5' G A 998 43.062 91.661 65.307 1.00 29.85 O
ATOM 6 C5' G A 998 42.385 92.871 64.916 1.00 30.41 C
ATOM 7 C4' G A 998 41.689 93.496 66.095 1.00 29.82 C
ATOM 8 O4' G A 998 40.636 92.611 66.562 1.00 29.72 O
ATOM 9 C3' G A 998 42.540 93.688 67.334 1.00 30.09 C
ATOM 10 O3' G A 998 43.422 94.790 67.252 1.00 30.30 O
ATOM 11 C2' G A 998 41.475 93.840 68.406 1.00 29.34 C
ATOM 12 O2' G A 998 40.842 95.102 68.409 1.00 32.32 O
ATOM 13 C1' G A 998 40.483 92.762 67.968 1.00 28.53 C
ATOM 14 N9 G A 998 40.854 91.515 68.628 1.00 25.65 N
ATOM 15 C8 G A 998 41.557 90.456 68.109 1.00 24.38 C
ATOM 16 N7 G A 998 41.835 89.546 69.000 1.00 23.99 N
ATOM 17 C5 G A 998 41.257 90.021 70.168 1.00 23.03 C
ATOM 18 C6 G A 998 41.254 89.485 71.473 1.00 23.91 C
ATOM 19 O6 G A 998 41.785 88.442 71.876 1.00 27.21 O
ATOM 20 N1 G A 998 40.557 90.301 72.360 1.00 21.29 N
ATOM 21 C2 G A 998 39.951 91.485 72.030 1.00 22.14 C
ATOM 22 N2 G A 998 39.342 92.149 73.018 1.00 23.67 N
ATOM 23 N3 G A 998 39.947 91.991 70.819 1.00 23.21 N
ATOM 24 C4 G A 998 40.619 91.216 69.945 1.00 23.66 C
ATOM 25 P A A 999 44.967 94.581 67.621 1.00 30.94 P
ATOM 26 OP1 A A 999 45.517 95.917 67.920 1.00 31.15 O
ATOM 27 OP2 A A 999 45.614 93.738 66.596 1.00 32.57 O
ATOM 28 O5' A A 999 44.919 93.724 68.954 1.00 29.39 O
TER

ATOM 1 O3' G B1254 40.244 98.056 73.012 1.00 27.89 O
ATOM 2 P A B1255 39.176 98.304 71.828 1.00 27.82 P
ATOM 3 OP1 A B1255 39.922 98.401 70.556 1.00 27.26 O
ATOM 4 OP2 A B1255 38.253 99.396 72.220 1.00 23.60 O
ATOM 5 O5' A B1255 38.365 96.938 71.750 1.00 29.81 O
ATOM 6 C5' A B1255 38.963 95.751 71.181 1.00 31.56 C
ATOM 7 C4' A B1255 37.948 94.634 71.126 1.00 33.57 C
ATOM 8 O4' A B1255 37.523 94.315 72.476 1.00 33.98 O
ATOM 9 C3' A B1255 36.650 94.970 70.406 1.00 34.32 C
ATOM 10 O3' A B1255 36.757 94.812 68.997 1.00 34.66 O
ATOM 11 C2' A B1255 35.674 93.985 71.024 1.00 32.93 C
ATOM 12 O2' A B1255 35.830 92.685 70.503 1.00 33.46 O
ATOM 13 C1' A B1255 36.141 93.988 72.478 1.00 33.53 C
ATOM 14 N9 A B1255 35.432 94.989 73.270 1.00 31.69 N
ATOM 15 C8 A B1255 35.851 96.241 73.626 1.00 32.13 C
ATOM 16 N7 A B1255 34.965 96.920 74.309 1.00 32.38 N
ATOM 17 C5 A B1255 33.893 96.053 74.415 1.00 31.78 C
ATOM 18 C6 A B1255 32.631 96.184 75.009 1.00 32.89 C
ATOM 19 N6 A B1255 32.216 97.287 75.623 1.00 34.21 N
ATOM 20 N1 A B1255 31.795 95.131 74.942 1.00 34.02 N
ATOM 21 C2 A B1255 32.209 94.025 74.310 1.00 34.74 C
ATOM 22 N3 A B1255 33.367 93.786 73.706 1.00 33.10 N
ATOM 23 C4 A B1255 34.173 94.854 73.793 1.00 31.99 C
ATOM 24 P U B1256 35.831 95.695 68.038 1.00 34.58 P
ATOM 25 OP1 U B1256 36.134 95.346 66.629 1.00 32.79 O
ATOM 26 OP2 U B1256 35.957 97.097 68.491 1.00 33.45 O
ATOM 27 O5' U B1256 34.354 95.211 68.388 1.00 35.97 O
TER

Atoms:
OP1: (44.769,91.896,63.538)
OP2: (44.637,89.747,64.920)
C3': (42.540,93.688,67.334)
C1': (40.483,92.762,67.968)
C5': (42.385,92.871,64.916)
O6: (41.785,88.442,71.876)
O4': (40.636,92.611,66.562)
C8: (41.557,90.456,68.109)
C2: (39.951,91.485,72.030)
C6: (41.254,89.485,71.473)
C5: (41.257,90.021,70.168)
C4: (40.619,91.216,69.945)
P: (43.957,90.880,64.252)
C4': (41.689,93.496,66.095)
C2': (41.475,93.840,68.406)
O2': (40.842,95.102,68.409)
N1: (40.557,90.301,72.360)
N2: (39.342,92.149,73.018)
N3: (39.947,91.991,70.819)
N7: (41.835,89.546,69.000)
N9: (40.854,91.515,68.628)
O5': (43.062,91.661,65.307)
O3': (43.422,94.790,67.252)
OP1: (39.922,98.401,70.556)
OP2: (38.253,99.396,72.220)
C3': (36.650,94.970,70.406)
C1': (36.141,93.988,72.478)
C5': (38.963,95.751,71.181)
O4': (37.523,94.315,72.476)
C8: (35.851,96.241,73.626)
O2': (35.830,92.685,70.503)
C6: (32.631,96.184,75.009)
C5: (33.893,96.053,74.415)
C4: (34.173,94.854,73.793)
P: (39.176,98.304,71.828)
C4': (37.948,94.634,71.126)
C2': (35.674,93.985,71.024)
C2: (32.209,94.025,74.310)
N1: (31.795,95.131,74.942)
N3: (33.367,93.786,73.706)
N6: (32.216,97.287,75.623)
N7: (34.965,96.920,74.309)
N9: (35.432,94.989,73.270)
O5': (38.365,96.938,71.750)
O3': (36.757,94.812,68.997)
Image (generated by PyMOL):
PyMOL image
show in jmol