Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A544:A541
Extra
PDB:
ATOM 1 O3' U A 543 142.112 109.476 -13.885 1.00 42.02 O
ATOM 2 P G A 544 143.436 110.255 -13.423 1.00 46.27 P
ATOM 3 OP1 G A 544 143.688 109.946 -11.989 1.00 38.17 O
ATOM 4 OP2 G A 544 143.339 111.670 -13.878 1.00 38.17 O
ATOM 5 O5' G A 544 144.593 109.571 -14.268 1.00 46.27 O
ATOM 6 C5' G A 544 145.880 110.179 -14.395 1.00 46.27 C
ATOM 7 C4' G A 544 146.884 109.137 -14.797 1.00 46.27 C
ATOM 8 O4' G A 544 147.186 108.312 -13.650 1.00 46.27 O
ATOM 9 C3' G A 544 146.386 108.204 -15.889 1.00 46.27 C
ATOM 10 O3' G A 544 147.480 107.836 -16.719 1.00 46.27 O
ATOM 11 C2' G A 544 145.902 106.993 -15.093 1.00 46.27 C
ATOM 12 O2' G A 544 145.945 105.790 -15.823 1.00 46.27 O
ATOM 13 C1' G A 544 146.906 106.967 -13.946 1.00 46.27 C
ATOM 14 N9 G A 544 146.470 106.333 -12.709 1.00 38.17 N
ATOM 15 C8 G A 544 145.490 106.773 -11.864 1.00 38.17 C
ATOM 16 N7 G A 544 145.387 106.053 -10.782 1.00 38.17 N
ATOM 17 C5 G A 544 146.345 105.067 -10.930 1.00 38.17 C
ATOM 18 C6 G A 544 146.725 104.018 -10.054 1.00 38.17 C
ATOM 19 O6 G A 544 146.302 103.765 -8.907 1.00 38.17 O
ATOM 20 N1 G A 544 147.730 103.234 -10.611 1.00 38.17 N
ATOM 21 C2 G A 544 148.314 103.446 -11.831 1.00 38.17 C
ATOM 22 N2 G A 544 149.253 102.567 -12.182 1.00 38.17 N
ATOM 23 N3 G A 544 147.994 104.440 -12.640 1.00 38.17 N
ATOM 24 C4 G A 544 147.006 105.206 -12.129 1.00 38.17 C
ATOM 25 P G A 545 147.936 108.784 -17.931 1.00 54.68 P
ATOM 26 OP1 G A 545 147.693 110.185 -17.542 1.00 74.08 O
ATOM 27 OP2 G A 545 147.419 108.274 -19.230 1.00 74.08 O
ATOM 28 O5' G A 545 149.501 108.559 -17.926 1.00 41.30 O
TER
ATOM 1 O3' C B 540 149.039 97.845 -15.629 1.00 41.12 O
ATOM 2 P A B 541 147.858 98.648 -14.867 1.00 31.18 P
ATOM 3 OP1 A B 541 147.972 98.552 -13.385 1.00 46.15 O
ATOM 4 OP2 A B 541 146.584 98.253 -15.523 1.00 46.15 O
ATOM 5 O5' A B 541 148.140 100.154 -15.294 1.00 31.18 O
ATOM 6 C5' A B 541 147.308 101.205 -14.836 1.00 31.18 C
ATOM 7 C4' A B 541 147.761 102.507 -15.419 1.00 31.18 C
ATOM 8 O4' A B 541 149.084 102.821 -14.946 1.00 31.18 O
ATOM 9 C3' A B 541 147.876 102.568 -16.934 1.00 31.18 C
ATOM 10 O3' A B 541 146.618 102.967 -17.456 1.00 31.18 O
ATOM 11 C2' A B 541 148.886 103.698 -17.162 1.00 31.18 C
ATOM 12 O2' A B 541 148.277 104.934 -17.447 1.00 31.18 O
ATOM 13 C1' A B 541 149.630 103.781 -15.818 1.00 31.18 C
ATOM 14 N9 A B 541 151.077 103.619 -15.879 1.00 46.15 N
ATOM 15 C8 A B 541 151.980 104.317 -15.129 1.00 46.15 C
ATOM 16 N7 A B 541 153.228 104.034 -15.406 1.00 46.15 N
ATOM 17 C5 A B 541 153.138 103.069 -16.398 1.00 46.15 C
ATOM 18 C6 A B 541 154.107 102.368 -17.109 1.00 46.15 C
ATOM 19 N6 A B 541 155.410 102.548 -16.935 1.00 46.15 N
ATOM 20 N1 A B 541 153.690 101.467 -18.021 1.00 46.15 N
ATOM 21 C2 A B 541 152.379 101.299 -18.199 1.00 46.15 C
ATOM 22 N3 A B 541 151.368 101.903 -17.594 1.00 46.15 N
ATOM 23 C4 A B 541 151.818 102.791 -16.690 1.00 46.15 C
ATOM 24 P C B 542 146.082 102.367 -18.838 1.00 37.98 P
ATOM 25 OP1 C B 542 146.540 100.955 -18.900 1.00 49.59 O
ATOM 26 OP2 C B 542 146.394 103.300 -19.951 1.00 49.59 O
ATOM 27 O5' C B 542 144.507 102.348 -18.612 1.00 37.98 O
TER
ATOM 2 P G A 544 143.436 110.255 -13.423 1.00 46.27 P
ATOM 3 OP1 G A 544 143.688 109.946 -11.989 1.00 38.17 O
ATOM 4 OP2 G A 544 143.339 111.670 -13.878 1.00 38.17 O
ATOM 5 O5' G A 544 144.593 109.571 -14.268 1.00 46.27 O
ATOM 6 C5' G A 544 145.880 110.179 -14.395 1.00 46.27 C
ATOM 7 C4' G A 544 146.884 109.137 -14.797 1.00 46.27 C
ATOM 8 O4' G A 544 147.186 108.312 -13.650 1.00 46.27 O
ATOM 9 C3' G A 544 146.386 108.204 -15.889 1.00 46.27 C
ATOM 10 O3' G A 544 147.480 107.836 -16.719 1.00 46.27 O
ATOM 11 C2' G A 544 145.902 106.993 -15.093 1.00 46.27 C
ATOM 12 O2' G A 544 145.945 105.790 -15.823 1.00 46.27 O
ATOM 13 C1' G A 544 146.906 106.967 -13.946 1.00 46.27 C
ATOM 14 N9 G A 544 146.470 106.333 -12.709 1.00 38.17 N
ATOM 15 C8 G A 544 145.490 106.773 -11.864 1.00 38.17 C
ATOM 16 N7 G A 544 145.387 106.053 -10.782 1.00 38.17 N
ATOM 17 C5 G A 544 146.345 105.067 -10.930 1.00 38.17 C
ATOM 18 C6 G A 544 146.725 104.018 -10.054 1.00 38.17 C
ATOM 19 O6 G A 544 146.302 103.765 -8.907 1.00 38.17 O
ATOM 20 N1 G A 544 147.730 103.234 -10.611 1.00 38.17 N
ATOM 21 C2 G A 544 148.314 103.446 -11.831 1.00 38.17 C
ATOM 22 N2 G A 544 149.253 102.567 -12.182 1.00 38.17 N
ATOM 23 N3 G A 544 147.994 104.440 -12.640 1.00 38.17 N
ATOM 24 C4 G A 544 147.006 105.206 -12.129 1.00 38.17 C
ATOM 25 P G A 545 147.936 108.784 -17.931 1.00 54.68 P
ATOM 26 OP1 G A 545 147.693 110.185 -17.542 1.00 74.08 O
ATOM 27 OP2 G A 545 147.419 108.274 -19.230 1.00 74.08 O
ATOM 28 O5' G A 545 149.501 108.559 -17.926 1.00 41.30 O
TER
ATOM 1 O3' C B 540 149.039 97.845 -15.629 1.00 41.12 O
ATOM 2 P A B 541 147.858 98.648 -14.867 1.00 31.18 P
ATOM 3 OP1 A B 541 147.972 98.552 -13.385 1.00 46.15 O
ATOM 4 OP2 A B 541 146.584 98.253 -15.523 1.00 46.15 O
ATOM 5 O5' A B 541 148.140 100.154 -15.294 1.00 31.18 O
ATOM 6 C5' A B 541 147.308 101.205 -14.836 1.00 31.18 C
ATOM 7 C4' A B 541 147.761 102.507 -15.419 1.00 31.18 C
ATOM 8 O4' A B 541 149.084 102.821 -14.946 1.00 31.18 O
ATOM 9 C3' A B 541 147.876 102.568 -16.934 1.00 31.18 C
ATOM 10 O3' A B 541 146.618 102.967 -17.456 1.00 31.18 O
ATOM 11 C2' A B 541 148.886 103.698 -17.162 1.00 31.18 C
ATOM 12 O2' A B 541 148.277 104.934 -17.447 1.00 31.18 O
ATOM 13 C1' A B 541 149.630 103.781 -15.818 1.00 31.18 C
ATOM 14 N9 A B 541 151.077 103.619 -15.879 1.00 46.15 N
ATOM 15 C8 A B 541 151.980 104.317 -15.129 1.00 46.15 C
ATOM 16 N7 A B 541 153.228 104.034 -15.406 1.00 46.15 N
ATOM 17 C5 A B 541 153.138 103.069 -16.398 1.00 46.15 C
ATOM 18 C6 A B 541 154.107 102.368 -17.109 1.00 46.15 C
ATOM 19 N6 A B 541 155.410 102.548 -16.935 1.00 46.15 N
ATOM 20 N1 A B 541 153.690 101.467 -18.021 1.00 46.15 N
ATOM 21 C2 A B 541 152.379 101.299 -18.199 1.00 46.15 C
ATOM 22 N3 A B 541 151.368 101.903 -17.594 1.00 46.15 N
ATOM 23 C4 A B 541 151.818 102.791 -16.690 1.00 46.15 C
ATOM 24 P C B 542 146.082 102.367 -18.838 1.00 37.98 P
ATOM 25 OP1 C B 542 146.540 100.955 -18.900 1.00 49.59 O
ATOM 26 OP2 C B 542 146.394 103.300 -19.951 1.00 49.59 O
ATOM 27 O5' C B 542 144.507 102.348 -18.612 1.00 37.98 O
TER
Atoms:
OP1: (143.688,109.946,-11.989)
OP2: (143.339,111.670,-13.878)
C3': (146.386,108.204,-15.889)
C1': (146.906,106.967,-13.946)
C5': (145.880,110.179,-14.395)
O6: (146.302,103.765,-8.907)
O4': (147.186,108.312,-13.650)
C8: (145.490,106.773,-11.864)
C2: (148.314,103.446,-11.831)
C6: (146.725,104.018,-10.054)
C5: (146.345,105.067,-10.930)
C4: (147.006,105.206,-12.129)
P: (143.436,110.255,-13.423)
C4': (146.884,109.137,-14.797)
C2': (145.902,106.993,-15.093)
O2': (145.945,105.790,-15.823)
N1: (147.730,103.234,-10.611)
N2: (149.253,102.567,-12.182)
N3: (147.994,104.440,-12.640)
N7: (145.387,106.053,-10.782)
N9: (146.470,106.333,-12.709)
O5': (144.593,109.571,-14.268)
O3': (147.480,107.836,-16.719)
OP2: (143.339,111.670,-13.878)
C3': (146.386,108.204,-15.889)
C1': (146.906,106.967,-13.946)
C5': (145.880,110.179,-14.395)
O6: (146.302,103.765,-8.907)
O4': (147.186,108.312,-13.650)
C8: (145.490,106.773,-11.864)
C2: (148.314,103.446,-11.831)
C6: (146.725,104.018,-10.054)
C5: (146.345,105.067,-10.930)
C4: (147.006,105.206,-12.129)
P: (143.436,110.255,-13.423)
C4': (146.884,109.137,-14.797)
C2': (145.902,106.993,-15.093)
O2': (145.945,105.790,-15.823)
N1: (147.730,103.234,-10.611)
N2: (149.253,102.567,-12.182)
N3: (147.994,104.440,-12.640)
N7: (145.387,106.053,-10.782)
N9: (146.470,106.333,-12.709)
O5': (144.593,109.571,-14.268)
O3': (147.480,107.836,-16.719)
OP1: (147.972,98.552,-13.385)
OP2: (146.584,98.253,-15.523)
C3': (147.876,102.568,-16.934)
C1': (149.630,103.781,-15.818)
C5': (147.308,101.205,-14.836)
O4': (149.084,102.821,-14.946)
C8: (151.980,104.317,-15.129)
O2': (148.277,104.934,-17.447)
C6: (154.107,102.368,-17.109)
C5: (153.138,103.069,-16.398)
C4: (151.818,102.791,-16.690)
P: (147.858,98.648,-14.867)
C4': (147.761,102.507,-15.419)
C2': (148.886,103.698,-17.162)
C2: (152.379,101.299,-18.199)
N1: (153.690,101.467,-18.021)
N3: (151.368,101.903,-17.594)
N6: (155.410,102.548,-16.935)
N7: (153.228,104.034,-15.406)
N9: (151.077,103.619,-15.879)
O5': (148.140,100.154,-15.294)
O3': (146.618,102.967,-17.456)
OP2: (146.584,98.253,-15.523)
C3': (147.876,102.568,-16.934)
C1': (149.630,103.781,-15.818)
C5': (147.308,101.205,-14.836)
O4': (149.084,102.821,-14.946)
C8: (151.980,104.317,-15.129)
O2': (148.277,104.934,-17.447)
C6: (154.107,102.368,-17.109)
C5: (153.138,103.069,-16.398)
C4: (151.818,102.791,-16.690)
P: (147.858,98.648,-14.867)
C4': (147.761,102.507,-15.419)
C2': (148.886,103.698,-17.162)
C2: (152.379,101.299,-18.199)
N1: (153.690,101.467,-18.021)
N3: (151.368,101.903,-17.594)
N6: (155.410,102.548,-16.935)
N7: (153.228,104.034,-15.406)
N9: (151.077,103.619,-15.879)
O5': (148.140,100.154,-15.294)
O3': (146.618,102.967,-17.456)
Image (generated by PyMOL):