ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01219:01047

Extra

PDB:
ATOM 1 O3' A A1218 17.339 101.414 102.075 1.00 42.34 O
ATOM 2 P G A1219 16.100 101.061 101.115 1.00 41.81 P
ATOM 3 OP1 G A1219 15.423 102.347 100.811 1.00 42.86 O
ATOM 4 OP2 G A1219 15.329 99.942 101.720 1.00 45.21 O
ATOM 5 O5' G A1219 16.776 100.521 99.780 1.00 40.87 O
ATOM 6 C5' G A1219 16.006 99.827 98.787 1.00 40.44 C
ATOM 7 C4' G A1219 16.928 99.148 97.804 1.00 41.42 C
ATOM 8 O4' G A1219 17.678 100.171 97.085 1.00 41.80 O
ATOM 9 C3' G A1219 17.972 98.225 98.424 1.00 40.81 C
ATOM 10 O3' G A1219 18.303 97.222 97.465 1.00 41.72 O
ATOM 11 C2' G A1219 19.162 99.170 98.595 1.00 41.75 C
ATOM 12 O2' G A1219 20.407 98.515 98.651 1.00 40.62 O
ATOM 13 C1' G A1219 19.059 99.984 97.307 1.00 41.28 C
ATOM 14 N9 G A1219 19.709 101.291 97.307 1.00 42.25 N
ATOM 15 C8 G A1219 19.482 102.354 98.154 1.00 41.66 C
ATOM 16 N7 G A1219 20.201 103.404 97.858 1.00 40.70 N
ATOM 17 C5 G A1219 20.957 103.005 96.760 1.00 41.01 C
ATOM 18 C6 G A1219 21.923 103.716 95.989 1.00 40.83 C
ATOM 19 O6 G A1219 22.307 104.880 96.118 1.00 40.50 O
ATOM 20 N1 G A1219 22.443 102.930 94.970 1.00 40.92 N
ATOM 21 C2 G A1219 22.081 101.634 94.709 1.00 42.45 C
ATOM 22 N2 G A1219 22.693 101.044 93.660 1.00 42.45 N
ATOM 23 N3 G A1219 21.185 100.962 95.415 1.00 40.02 N
ATOM 24 C4 G A1219 20.669 101.703 96.415 1.00 39.93 C
ATOM 25 P A A1220 17.380 95.916 97.315 1.00 41.61 P
ATOM 26 OP1 A A1220 17.463 95.476 95.898 1.00 38.92 O
ATOM 27 OP2 A A1220 16.059 96.224 97.906 1.00 40.84 O
ATOM 28 O5' A A1220 18.086 94.824 98.229 1.00 38.72 O
TER

ATOM 1 O3' G B1046 23.794 93.761 95.079 1.00 40.99 O
ATOM 2 P A B1047 22.409 94.237 95.728 1.00 44.94 P
ATOM 3 OP1 A B1047 22.622 94.381 97.180 1.00 43.78 O
ATOM 4 OP2 A B1047 21.330 93.345 95.226 1.00 50.05 O
ATOM 5 O5' A B1047 22.217 95.682 95.094 1.00 44.02 O
ATOM 6 C5' A B1047 20.958 96.365 95.105 1.00 42.94 C
ATOM 7 C4' A B1047 20.805 97.167 93.827 1.00 44.21 C
ATOM 8 O4' A B1047 22.014 97.959 93.615 1.00 44.39 O
ATOM 9 C3' A B1047 20.647 96.326 92.563 1.00 44.79 C
ATOM 10 O3' A B1047 19.891 97.057 91.610 1.00 46.18 O
ATOM 11 C2' A B1047 22.079 96.176 92.081 1.00 44.60 C
ATOM 12 O2' A B1047 22.187 95.924 90.699 1.00 45.62 O
ATOM 13 C1' A B1047 22.657 97.545 92.423 1.00 43.75 C
ATOM 14 N9 A B1047 24.099 97.484 92.669 1.00 44.83 N
ATOM 15 C8 A B1047 24.808 96.455 93.248 1.00 44.51 C
ATOM 16 N7 A B1047 26.097 96.670 93.311 1.00 43.51 N
ATOM 17 C5 A B1047 26.252 97.928 92.744 1.00 43.54 C
ATOM 18 C6 A B1047 27.384 98.725 92.514 1.00 42.38 C
ATOM 19 N6 A B1047 28.633 98.351 92.824 1.00 41.87 N
ATOM 20 N1 A B1047 27.191 99.931 91.942 1.00 41.55 N
ATOM 21 C2 A B1047 25.947 100.299 91.618 1.00 40.56 C
ATOM 22 N3 A B1047 24.808 99.639 91.773 1.00 43.10 N
ATOM 23 C4 A B1047 25.029 98.444 92.351 1.00 43.54 C
ATOM 24 P G B1048 18.867 96.290 90.639 1.00 46.54 P
ATOM 25 OP1 G B1048 17.586 96.160 91.370 1.00 48.14 O
ATOM 26 OP2 G B1048 19.506 95.083 90.073 1.00 43.35 O
ATOM 27 O5' G B1048 18.637 97.343 89.472 1.00 45.75 O
TER

Atoms:
OP1: (15.423,102.347,100.811)
OP2: (15.329,99.942,101.720)
C3': (17.972,98.225,98.424)
C1': (19.059,99.984,97.307)
C5': (16.006,99.827,98.787)
O6: (22.307,104.880,96.118)
O4': (17.678,100.171,97.085)
C8: (19.482,102.354,98.154)
C2: (22.081,101.634,94.709)
C6: (21.923,103.716,95.989)
C5: (20.957,103.005,96.760)
C4: (20.669,101.703,96.415)
P: (16.100,101.061,101.115)
C4': (16.928,99.148,97.804)
C2': (19.162,99.170,98.595)
O2': (20.407,98.515,98.651)
N1: (22.443,102.930,94.970)
N2: (22.693,101.044,93.660)
N3: (21.185,100.962,95.415)
N7: (20.201,103.404,97.858)
N9: (19.709,101.291,97.307)
O5': (16.776,100.521,99.780)
O3': (18.303,97.222,97.465)
OP1: (22.622,94.381,97.180)
OP2: (21.330,93.345,95.226)
C3': (20.647,96.326,92.563)
C1': (22.657,97.545,92.423)
C5': (20.958,96.365,95.105)
O4': (22.014,97.959,93.615)
C8: (24.808,96.455,93.248)
O2': (22.187,95.924,90.699)
C6: (27.384,98.725,92.514)
C5: (26.252,97.928,92.744)
C4: (25.029,98.444,92.351)
P: (22.409,94.237,95.728)
C4': (20.805,97.167,93.827)
C2': (22.079,96.176,92.081)
C2: (25.947,100.299,91.618)
N1: (27.191,99.931,91.942)
N3: (24.808,99.639,91.773)
N6: (28.633,98.351,92.824)
N7: (26.097,96.670,93.311)
N9: (24.099,97.484,92.669)
O5': (22.217,95.682,95.094)
O3': (19.891,97.057,91.610)
Image (generated by PyMOL):
PyMOL image
show in jmol