ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A1715:A1971

Extra

PDB:
ATOM 1 O3' G A1714 5.048 106.466 120.380 1.00 41.00 O
ATOM 2 P G A1715 5.108 105.587 121.710 1.00 43.36 P
ATOM 3 OP1 G A1715 5.863 106.325 122.742 1.00 42.12 O
ATOM 4 OP2 G A1715 5.525 104.214 121.348 1.00 44.04 O
ATOM 5 O5' G A1715 3.581 105.528 122.144 1.00 48.28 O
ATOM 6 C5' G A1715 3.260 105.381 123.520 1.00 49.42 C
ATOM 7 C4' G A1715 1.965 106.126 123.719 1.00 50.20 C
ATOM 8 O4' G A1715 1.320 106.212 122.419 1.00 57.21 O
ATOM 9 C3' G A1715 0.958 105.469 124.642 1.00 46.25 C
ATOM 10 O3' G A1715 1.092 106.042 125.910 1.00 39.81 O
ATOM 11 C2' G A1715 -0.340 105.966 124.036 1.00 57.39 C
ATOM 12 O2' G A1715 -0.559 107.311 124.437 1.00 62.08 O
ATOM 13 C1' G A1715 -0.039 105.865 122.542 1.00 57.20 C
ATOM 14 N9 G A1715 -0.168 104.523 121.999 1.00 65.13 N
ATOM 15 C8 G A1715 0.837 103.715 121.522 1.00 68.45 C
ATOM 16 N7 G A1715 0.419 102.554 121.100 1.00 58.52 N
ATOM 17 C5 G A1715 -0.950 102.598 121.318 1.00 55.04 C
ATOM 18 C6 G A1715 -1.932 101.629 121.062 1.00 52.88 C
ATOM 19 O6 G A1715 -1.776 100.506 120.575 1.00 67.00 O
ATOM 20 N1 G A1715 -3.193 102.072 121.430 1.00 50.96 N
ATOM 21 C2 G A1715 -3.459 103.301 121.979 1.00 62.15 C
ATOM 22 N2 G A1715 -4.738 103.567 122.277 1.00 80.04 N
ATOM 23 N3 G A1715 -2.545 104.223 122.225 1.00 59.73 N
ATOM 24 C4 G A1715 -1.320 103.799 121.868 1.00 60.59 C
ATOM 25 P G A1716 1.433 105.098 127.147 1.00 37.98 P
ATOM 26 OP1 G A1716 1.367 105.899 128.397 1.00 52.90 O
ATOM 27 OP2 G A1716 2.694 104.390 126.816 1.00 35.62 O
ATOM 28 O5' G A1716 0.207 104.055 127.129 1.00 65.10 O
TER

ATOM 1 O3' U B1970 -12.658 107.368 122.099 1.00 45.39 O
ATOM 2 P A B1971 -12.271 106.570 123.427 1.00 51.62 P
ATOM 3 OP1 A B1971 -12.795 105.190 123.241 1.00 49.53 O
ATOM 4 OP2 A B1971 -12.687 107.397 124.602 1.00 44.04 O
ATOM 5 O5' A B1971 -10.664 106.553 123.381 1.00 38.36 O
ATOM 6 C5' A B1971 -9.972 105.502 122.745 1.00 38.75 C
ATOM 7 C4' A B1971 -8.571 105.926 122.352 1.00 35.60 C
ATOM 8 O4' A B1971 -8.634 107.105 121.509 1.00 54.48 O
ATOM 9 C3' A B1971 -7.656 106.300 123.501 1.00 34.73 C
ATOM 10 O3' A B1971 -6.981 105.146 123.920 1.00 29.57 O
ATOM 11 C2' A B1971 -6.681 107.235 122.798 1.00 43.57 C
ATOM 12 O2' A B1971 -5.714 106.514 122.062 1.00 39.76 O
ATOM 13 C1' A B1971 -7.582 107.993 121.825 1.00 47.13 C
ATOM 14 N9 A B1971 -8.207 109.164 122.412 1.00 36.51 N
ATOM 15 C8 A B1971 -9.533 109.323 122.677 1.00 47.72 C
ATOM 16 N7 A B1971 -9.837 110.472 123.230 1.00 48.32 N
ATOM 17 C5 A B1971 -8.618 111.113 123.338 1.00 44.60 C
ATOM 18 C6 A B1971 -8.263 112.380 123.842 1.00 40.60 C
ATOM 19 N6 A B1971 -9.152 113.237 124.348 1.00 50.17 N
ATOM 20 N1 A B1971 -6.961 112.723 123.804 1.00 37.88 N
ATOM 21 C2 A B1971 -6.088 111.841 123.292 1.00 49.44 C
ATOM 22 N3 A B1971 -6.306 110.619 122.783 1.00 43.21 N
ATOM 23 C4 A B1971 -7.606 110.315 122.838 1.00 37.03 C
ATOM 24 P A B1972 -7.000 104.779 125.461 1.00 39.86 P
ATOM 25 OP1 A B1972 -6.392 103.444 125.615 1.00 49.55 O
ATOM 26 OP2 A B1972 -8.366 105.025 125.960 1.00 49.26 O
ATOM 27 O5' A B1972 -6.059 105.876 126.142 1.00 44.51 O
TER

Atoms:
OP1: (5.863,106.325,122.742)
OP2: (5.525,104.214,121.348)
C3': (0.958,105.469,124.642)
C1': (-0.039,105.865,122.542)
C5': (3.260,105.381,123.520)
O6: (-1.776,100.506,120.575)
O4': (1.320,106.212,122.419)
C8: (0.837,103.715,121.522)
C2: (-3.459,103.301,121.979)
C6: (-1.932,101.629,121.062)
C5: (-0.950,102.598,121.318)
C4: (-1.320,103.799,121.868)
P: (5.108,105.587,121.710)
C4': (1.965,106.126,123.719)
C2': (-0.340,105.966,124.036)
O2': (-0.559,107.311,124.437)
N1: (-3.193,102.072,121.430)
N2: (-4.738,103.567,122.277)
N3: (-2.545,104.223,122.225)
N7: (0.419,102.554,121.100)
N9: (-0.168,104.523,121.999)
O5': (3.581,105.528,122.144)
O3': (1.092,106.042,125.910)
OP1: (-12.795,105.190,123.241)
OP2: (-12.687,107.397,124.602)
C3': (-7.656,106.300,123.501)
C1': (-7.582,107.993,121.825)
C5': (-9.972,105.502,122.745)
O4': (-8.634,107.105,121.509)
C8: (-9.533,109.323,122.677)
O2': (-5.714,106.514,122.062)
C6: (-8.263,112.380,123.842)
C5: (-8.618,111.113,123.338)
C4: (-7.606,110.315,122.838)
P: (-12.271,106.570,123.427)
C4': (-8.571,105.926,122.352)
C2': (-6.681,107.235,122.798)
C2: (-6.088,111.841,123.292)
N1: (-6.961,112.723,123.804)
N3: (-6.306,110.619,122.783)
N6: (-9.152,113.237,124.348)
N7: (-9.837,110.472,123.230)
N9: (-8.207,109.164,122.412)
O5': (-10.664,106.553,123.381)
O3': (-6.981,105.146,123.920)
Image (generated by PyMOL):
PyMOL image
show in jmol