ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0857:0854

Extra

PDB:
ATOM 1 O3' G A 856 88.128 121.748 63.002 1.00 35.31 O
ATOM 2 P G A 857 89.257 121.991 61.892 1.00 33.12 P
ATOM 3 OP1 G A 857 88.826 121.341 60.630 1.00 35.55 O
ATOM 4 OP2 G A 857 90.571 121.630 62.492 1.00 31.73 O
ATOM 5 O5' G A 857 89.197 123.559 61.657 1.00 32.52 O
ATOM 6 C5' G A 857 89.640 124.489 62.653 1.00 29.74 C
ATOM 7 C4' G A 857 89.352 125.890 62.179 1.00 32.07 C
ATOM 8 O4' G A 857 87.917 126.124 62.198 1.00 32.30 O
ATOM 9 C3' G A 857 89.930 127.032 62.990 1.00 32.07 C
ATOM 10 O3' G A 857 91.302 127.243 62.634 1.00 34.86 O
ATOM 11 C2' G A 857 89.011 128.170 62.566 1.00 31.76 C
ATOM 12 O2' G A 857 89.257 128.608 61.251 1.00 29.68 O
ATOM 13 C1' G A 857 87.654 127.465 62.558 1.00 31.63 C
ATOM 14 N9 G A 857 87.059 127.465 63.890 1.00 32.58 N
ATOM 15 C8 G A 857 86.908 126.388 64.734 1.00 31.39 C
ATOM 16 N7 G A 857 86.387 126.709 65.886 1.00 30.90 N
ATOM 17 C5 G A 857 86.171 128.076 65.797 1.00 31.56 C
ATOM 18 C6 G A 857 85.632 128.985 66.745 1.00 30.68 C
ATOM 19 O6 G A 857 85.198 128.746 67.883 1.00 30.29 O
ATOM 20 N1 G A 857 85.613 130.287 66.252 1.00 28.69 N
ATOM 21 C2 G A 857 86.044 130.666 65.001 1.00 29.78 C
ATOM 22 N2 G A 857 85.945 131.969 64.704 1.00 26.35 N
ATOM 23 N3 G A 857 86.536 129.825 64.105 1.00 31.40 N
ATOM 24 C4 G A 857 86.572 128.557 64.567 1.00 32.32 C
ATOM 25 P G A 858 92.376 127.684 63.753 1.00 32.47 P
ATOM 26 OP1 G A 858 93.697 127.197 63.294 1.00 36.29 O
ATOM 27 OP2 G A 858 91.896 127.312 65.099 1.00 31.73 O
ATOM 28 O5' G A 858 92.352 129.269 63.652 1.00 34.55 O
TER

ATOM 1 O3' U B 853 91.079 134.128 58.876 1.00 36.47 O
ATOM 2 P A B 854 89.669 133.613 58.303 1.00 37.17 P
ATOM 3 OP1 A B 854 89.901 132.211 57.862 1.00 38.50 O
ATOM 4 OP2 A B 854 89.123 134.613 57.337 1.00 37.77 O
ATOM 5 O5' A B 854 88.716 133.604 59.577 1.00 36.79 O
ATOM 6 C5' A B 854 88.873 132.621 60.613 1.00 34.91 C
ATOM 7 C4' A B 854 87.561 131.923 60.845 1.00 34.35 C
ATOM 8 O4' A B 854 86.635 132.861 61.467 1.00 30.67 O
ATOM 9 C3' A B 854 86.877 131.427 59.567 1.00 33.76 C
ATOM 10 O3' A B 854 86.156 130.238 59.852 1.00 36.52 O
ATOM 11 C2' A B 854 85.897 132.558 59.272 1.00 30.72 C
ATOM 12 O2' A B 854 84.779 132.142 58.528 1.00 31.57 O
ATOM 13 C1' A B 854 85.470 132.941 60.684 1.00 30.74 C
ATOM 14 N9 A B 854 84.855 134.260 60.849 1.00 30.17 N
ATOM 15 C8 A B 854 84.433 135.137 59.872 1.00 28.16 C
ATOM 16 N7 A B 854 83.824 136.199 60.342 1.00 26.16 N
ATOM 17 C5 A B 854 83.872 136.028 61.720 1.00 26.47 C
ATOM 18 C6 A B 854 83.397 136.803 62.777 1.00 25.63 C
ATOM 19 N6 A B 854 82.734 137.948 62.609 1.00 28.60 N
ATOM 20 N1 A B 854 83.615 136.362 64.030 1.00 26.30 N
ATOM 21 C2 A B 854 84.260 135.207 64.199 1.00 27.89 C
ATOM 22 N3 A B 854 84.752 134.375 63.282 1.00 28.99 N
ATOM 23 C4 A B 854 84.522 134.850 62.047 1.00 27.80 C
ATOM 24 P G B 855 86.436 128.900 59.006 1.00 36.49 P
ATOM 25 OP1 G B 855 87.865 128.554 59.146 1.00 37.59 O
ATOM 26 OP2 G B 855 85.840 129.032 57.654 1.00 37.50 O
ATOM 27 O5' G B 855 85.633 127.784 59.810 1.00 39.09 O
TER

Atoms:
OP1: (88.826,121.341,60.630)
OP2: (90.571,121.630,62.492)
C3': (89.930,127.032,62.990)
C1': (87.654,127.465,62.558)
C5': (89.640,124.489,62.653)
O6: (85.198,128.746,67.883)
O4': (87.917,126.124,62.198)
C8: (86.908,126.388,64.734)
C2: (86.044,130.666,65.001)
C6: (85.632,128.985,66.745)
C5: (86.171,128.076,65.797)
C4: (86.572,128.557,64.567)
P: (89.257,121.991,61.892)
C4': (89.352,125.890,62.179)
C2': (89.011,128.170,62.566)
O2': (89.257,128.608,61.251)
N1: (85.613,130.287,66.252)
N2: (85.945,131.969,64.704)
N3: (86.536,129.825,64.105)
N7: (86.387,126.709,65.886)
N9: (87.059,127.465,63.890)
O5': (89.197,123.559,61.657)
O3': (91.302,127.243,62.634)
OP1: (89.901,132.211,57.862)
OP2: (89.123,134.613,57.337)
C3': (86.877,131.427,59.567)
C1': (85.470,132.941,60.684)
C5': (88.873,132.621,60.613)
O4': (86.635,132.861,61.467)
C8: (84.433,135.137,59.872)
O2': (84.779,132.142,58.528)
C6: (83.397,136.803,62.777)
C5: (83.872,136.028,61.720)
C4: (84.522,134.850,62.047)
P: (89.669,133.613,58.303)
C4': (87.561,131.923,60.845)
C2': (85.897,132.558,59.272)
C2: (84.260,135.207,64.199)
N1: (83.615,136.362,64.030)
N3: (84.752,134.375,63.282)
N6: (82.734,137.948,62.609)
N7: (83.824,136.199,60.342)
N9: (84.855,134.260,60.849)
O5': (88.716,133.604,59.577)
O3': (86.156,130.238,59.852)
Image (generated by PyMOL):
PyMOL image
show in jmol