Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0857:0854
Extra
PDB:
ATOM 1 O3' G A 856 88.513 122.408 63.284 1.00 31.56 O
ATOM 2 P G A 857 89.648 122.602 62.169 1.00 29.81 P
ATOM 3 OP1 G A 857 89.257 121.873 60.936 1.00 32.15 O
ATOM 4 OP2 G A 857 90.933 122.301 62.818 1.00 27.20 O
ATOM 5 O5' G A 857 89.573 124.148 61.830 1.00 29.33 O
ATOM 6 C5' G A 857 90.039 125.123 62.763 1.00 29.09 C
ATOM 7 C4' G A 857 89.714 126.500 62.263 1.00 29.63 C
ATOM 8 O4' G A 857 88.280 126.726 62.343 1.00 29.89 O
ATOM 9 C3' G A 857 90.309 127.629 63.075 1.00 30.40 C
ATOM 10 O3' G A 857 91.677 127.827 62.716 1.00 32.90 O
ATOM 11 C2' G A 857 89.380 128.778 62.705 1.00 29.89 C
ATOM 12 O2' G A 857 89.602 129.268 61.401 1.00 30.07 O
ATOM 13 C1' G A 857 88.026 128.071 62.717 1.00 27.78 C
ATOM 14 N9 G A 857 87.439 128.072 64.055 1.00 25.40 N
ATOM 15 C8 G A 857 87.274 126.993 64.890 1.00 23.65 C
ATOM 16 N7 G A 857 86.755 127.313 66.044 1.00 22.73 N
ATOM 17 C5 G A 857 86.560 128.684 65.966 1.00 22.99 C
ATOM 18 C6 G A 857 86.047 129.592 66.923 1.00 23.23 C
ATOM 19 O6 G A 857 85.653 129.360 68.073 1.00 23.20 O
ATOM 20 N1 G A 857 86.024 130.892 66.431 1.00 22.49 N
ATOM 21 C2 G A 857 86.442 131.272 65.185 1.00 23.26 C
ATOM 22 N2 G A 857 86.328 132.573 64.894 1.00 22.51 N
ATOM 23 N3 G A 857 86.933 130.437 64.285 1.00 24.81 N
ATOM 24 C4 G A 857 86.964 129.167 64.740 1.00 24.36 C
ATOM 25 P G A 858 92.751 128.258 63.837 1.00 34.31 P
ATOM 26 OP1 G A 858 94.093 127.782 63.405 1.00 34.53 O
ATOM 27 OP2 G A 858 92.233 127.866 65.170 1.00 31.70 O
ATOM 28 O5' G A 858 92.715 129.844 63.752 1.00 33.82 O
TER
ATOM 1 O3' U B 853 91.384 134.733 59.114 1.00 30.99 O
ATOM 2 P A B 854 89.996 134.265 58.471 1.00 30.01 P
ATOM 3 OP1 A B 854 90.196 132.899 57.933 1.00 30.65 O
ATOM 4 OP2 A B 854 89.500 135.339 57.580 1.00 32.87 O
ATOM 5 O5' A B 854 89.020 134.208 59.722 1.00 29.82 O
ATOM 6 C5' A B 854 89.208 133.235 60.747 1.00 28.07 C
ATOM 7 C4' A B 854 87.914 132.523 60.998 1.00 28.33 C
ATOM 8 O4' A B 854 86.990 133.447 61.639 1.00 28.37 O
ATOM 9 C3' A B 854 87.217 132.027 59.733 1.00 28.27 C
ATOM 10 O3' A B 854 86.508 130.842 60.034 1.00 27.85 O
ATOM 11 C2' A B 854 86.227 133.153 59.450 1.00 28.81 C
ATOM 12 O2' A B 854 85.081 132.761 58.725 1.00 32.06 O
ATOM 13 C1' A B 854 85.819 133.540 60.864 1.00 27.84 C
ATOM 14 N9 A B 854 85.244 134.876 60.999 1.00 26.72 N
ATOM 15 C8 A B 854 84.909 135.763 60.004 1.00 26.97 C
ATOM 16 N7 A B 854 84.302 136.840 60.439 1.00 25.47 N
ATOM 17 C5 A B 854 84.256 136.662 61.811 1.00 24.65 C
ATOM 18 C6 A B 854 83.720 137.436 62.829 1.00 24.62 C
ATOM 19 N6 A B 854 83.076 138.577 62.614 1.00 26.27 N
ATOM 20 N1 A B 854 83.857 136.993 64.095 1.00 26.31 N
ATOM 21 C2 A B 854 84.488 135.832 64.304 1.00 25.82 C
ATOM 22 N3 A B 854 85.022 135.000 63.420 1.00 25.72 N
ATOM 23 C4 A B 854 84.866 135.476 62.174 1.00 25.60 C
ATOM 24 P G B 855 86.805 129.501 59.213 1.00 28.82 P
ATOM 25 OP1 G B 855 88.257 129.230 59.256 1.00 29.04 O
ATOM 26 OP2 G B 855 86.122 129.595 57.905 1.00 24.95 O
ATOM 27 O5' G B 855 86.090 128.391 60.105 1.00 30.40 O
TER
ATOM 2 P G A 857 89.648 122.602 62.169 1.00 29.81 P
ATOM 3 OP1 G A 857 89.257 121.873 60.936 1.00 32.15 O
ATOM 4 OP2 G A 857 90.933 122.301 62.818 1.00 27.20 O
ATOM 5 O5' G A 857 89.573 124.148 61.830 1.00 29.33 O
ATOM 6 C5' G A 857 90.039 125.123 62.763 1.00 29.09 C
ATOM 7 C4' G A 857 89.714 126.500 62.263 1.00 29.63 C
ATOM 8 O4' G A 857 88.280 126.726 62.343 1.00 29.89 O
ATOM 9 C3' G A 857 90.309 127.629 63.075 1.00 30.40 C
ATOM 10 O3' G A 857 91.677 127.827 62.716 1.00 32.90 O
ATOM 11 C2' G A 857 89.380 128.778 62.705 1.00 29.89 C
ATOM 12 O2' G A 857 89.602 129.268 61.401 1.00 30.07 O
ATOM 13 C1' G A 857 88.026 128.071 62.717 1.00 27.78 C
ATOM 14 N9 G A 857 87.439 128.072 64.055 1.00 25.40 N
ATOM 15 C8 G A 857 87.274 126.993 64.890 1.00 23.65 C
ATOM 16 N7 G A 857 86.755 127.313 66.044 1.00 22.73 N
ATOM 17 C5 G A 857 86.560 128.684 65.966 1.00 22.99 C
ATOM 18 C6 G A 857 86.047 129.592 66.923 1.00 23.23 C
ATOM 19 O6 G A 857 85.653 129.360 68.073 1.00 23.20 O
ATOM 20 N1 G A 857 86.024 130.892 66.431 1.00 22.49 N
ATOM 21 C2 G A 857 86.442 131.272 65.185 1.00 23.26 C
ATOM 22 N2 G A 857 86.328 132.573 64.894 1.00 22.51 N
ATOM 23 N3 G A 857 86.933 130.437 64.285 1.00 24.81 N
ATOM 24 C4 G A 857 86.964 129.167 64.740 1.00 24.36 C
ATOM 25 P G A 858 92.751 128.258 63.837 1.00 34.31 P
ATOM 26 OP1 G A 858 94.093 127.782 63.405 1.00 34.53 O
ATOM 27 OP2 G A 858 92.233 127.866 65.170 1.00 31.70 O
ATOM 28 O5' G A 858 92.715 129.844 63.752 1.00 33.82 O
TER
ATOM 1 O3' U B 853 91.384 134.733 59.114 1.00 30.99 O
ATOM 2 P A B 854 89.996 134.265 58.471 1.00 30.01 P
ATOM 3 OP1 A B 854 90.196 132.899 57.933 1.00 30.65 O
ATOM 4 OP2 A B 854 89.500 135.339 57.580 1.00 32.87 O
ATOM 5 O5' A B 854 89.020 134.208 59.722 1.00 29.82 O
ATOM 6 C5' A B 854 89.208 133.235 60.747 1.00 28.07 C
ATOM 7 C4' A B 854 87.914 132.523 60.998 1.00 28.33 C
ATOM 8 O4' A B 854 86.990 133.447 61.639 1.00 28.37 O
ATOM 9 C3' A B 854 87.217 132.027 59.733 1.00 28.27 C
ATOM 10 O3' A B 854 86.508 130.842 60.034 1.00 27.85 O
ATOM 11 C2' A B 854 86.227 133.153 59.450 1.00 28.81 C
ATOM 12 O2' A B 854 85.081 132.761 58.725 1.00 32.06 O
ATOM 13 C1' A B 854 85.819 133.540 60.864 1.00 27.84 C
ATOM 14 N9 A B 854 85.244 134.876 60.999 1.00 26.72 N
ATOM 15 C8 A B 854 84.909 135.763 60.004 1.00 26.97 C
ATOM 16 N7 A B 854 84.302 136.840 60.439 1.00 25.47 N
ATOM 17 C5 A B 854 84.256 136.662 61.811 1.00 24.65 C
ATOM 18 C6 A B 854 83.720 137.436 62.829 1.00 24.62 C
ATOM 19 N6 A B 854 83.076 138.577 62.614 1.00 26.27 N
ATOM 20 N1 A B 854 83.857 136.993 64.095 1.00 26.31 N
ATOM 21 C2 A B 854 84.488 135.832 64.304 1.00 25.82 C
ATOM 22 N3 A B 854 85.022 135.000 63.420 1.00 25.72 N
ATOM 23 C4 A B 854 84.866 135.476 62.174 1.00 25.60 C
ATOM 24 P G B 855 86.805 129.501 59.213 1.00 28.82 P
ATOM 25 OP1 G B 855 88.257 129.230 59.256 1.00 29.04 O
ATOM 26 OP2 G B 855 86.122 129.595 57.905 1.00 24.95 O
ATOM 27 O5' G B 855 86.090 128.391 60.105 1.00 30.40 O
TER
Atoms:
OP1: (89.257,121.873,60.936)
OP2: (90.933,122.301,62.818)
C3': (90.309,127.629,63.075)
C1': (88.026,128.071,62.717)
C5': (90.039,125.123,62.763)
O6: (85.653,129.360,68.073)
O4': (88.280,126.726,62.343)
C8: (87.274,126.993,64.890)
C2: (86.442,131.272,65.185)
C6: (86.047,129.592,66.923)
C5: (86.560,128.684,65.966)
C4: (86.964,129.167,64.740)
P: (89.648,122.602,62.169)
C4': (89.714,126.500,62.263)
C2': (89.380,128.778,62.705)
O2': (89.602,129.268,61.401)
N1: (86.024,130.892,66.431)
N2: (86.328,132.573,64.894)
N3: (86.933,130.437,64.285)
N7: (86.755,127.313,66.044)
N9: (87.439,128.072,64.055)
O5': (89.573,124.148,61.830)
O3': (91.677,127.827,62.716)
OP2: (90.933,122.301,62.818)
C3': (90.309,127.629,63.075)
C1': (88.026,128.071,62.717)
C5': (90.039,125.123,62.763)
O6: (85.653,129.360,68.073)
O4': (88.280,126.726,62.343)
C8: (87.274,126.993,64.890)
C2: (86.442,131.272,65.185)
C6: (86.047,129.592,66.923)
C5: (86.560,128.684,65.966)
C4: (86.964,129.167,64.740)
P: (89.648,122.602,62.169)
C4': (89.714,126.500,62.263)
C2': (89.380,128.778,62.705)
O2': (89.602,129.268,61.401)
N1: (86.024,130.892,66.431)
N2: (86.328,132.573,64.894)
N3: (86.933,130.437,64.285)
N7: (86.755,127.313,66.044)
N9: (87.439,128.072,64.055)
O5': (89.573,124.148,61.830)
O3': (91.677,127.827,62.716)
OP1: (90.196,132.899,57.933)
OP2: (89.500,135.339,57.580)
C3': (87.217,132.027,59.733)
C1': (85.819,133.540,60.864)
C5': (89.208,133.235,60.747)
O4': (86.990,133.447,61.639)
C8: (84.909,135.763,60.004)
O2': (85.081,132.761,58.725)
C6: (83.720,137.436,62.829)
C5: (84.256,136.662,61.811)
C4: (84.866,135.476,62.174)
P: (89.996,134.265,58.471)
C4': (87.914,132.523,60.998)
C2': (86.227,133.153,59.450)
C2: (84.488,135.832,64.304)
N1: (83.857,136.993,64.095)
N3: (85.022,135.000,63.420)
N6: (83.076,138.577,62.614)
N7: (84.302,136.840,60.439)
N9: (85.244,134.876,60.999)
O5': (89.020,134.208,59.722)
O3': (86.508,130.842,60.034)
OP2: (89.500,135.339,57.580)
C3': (87.217,132.027,59.733)
C1': (85.819,133.540,60.864)
C5': (89.208,133.235,60.747)
O4': (86.990,133.447,61.639)
C8: (84.909,135.763,60.004)
O2': (85.081,132.761,58.725)
C6: (83.720,137.436,62.829)
C5: (84.256,136.662,61.811)
C4: (84.866,135.476,62.174)
P: (89.996,134.265,58.471)
C4': (87.914,132.523,60.998)
C2': (86.227,133.153,59.450)
C2: (84.488,135.832,64.304)
N1: (83.857,136.993,64.095)
N3: (85.022,135.000,63.420)
N6: (83.076,138.577,62.614)
N7: (84.302,136.840,60.439)
N9: (85.244,134.876,60.999)
O5': (89.020,134.208,59.722)
O3': (86.508,130.842,60.034)
Image (generated by PyMOL):