ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0375:02110

Extra

PDB:
ATOM 1 O3' G A 374 95.600 92.180 39.768 1.00 40.86 O
ATOM 2 P G A 375 94.702 92.753 40.968 1.00 41.38 P
ATOM 3 OP1 G A 375 94.878 91.808 42.099 1.00 42.11 O
ATOM 4 OP2 G A 375 93.340 93.064 40.470 1.00 41.20 O
ATOM 5 O5' G A 375 95.400 94.128 41.351 1.00 41.22 O
ATOM 6 C5' G A 375 96.706 94.132 41.943 1.00 41.99 C
ATOM 7 C4' G A 375 97.065 95.513 42.438 1.00 41.21 C
ATOM 8 O4' G A 375 97.267 96.407 41.313 1.00 39.47 O
ATOM 9 C3' G A 375 96.030 96.249 43.271 1.00 39.90 C
ATOM 10 O3' G A 375 95.923 95.791 44.607 1.00 39.15 O
ATOM 11 C2' G A 375 96.537 97.676 43.177 1.00 38.85 C
ATOM 12 O2' G A 375 97.687 97.887 43.980 1.00 38.83 O
ATOM 13 C1' G A 375 96.927 97.732 41.701 1.00 38.58 C
ATOM 14 N9 G A 375 95.823 98.190 40.863 1.00 38.24 N
ATOM 15 C8 G A 375 95.009 97.428 40.058 1.00 38.57 C
ATOM 16 N7 G A 375 94.103 98.130 39.434 1.00 37.72 N
ATOM 17 C5 G A 375 94.333 99.432 39.851 1.00 37.68 C
ATOM 18 C6 G A 375 93.670 100.627 39.510 1.00 38.27 C
ATOM 19 O6 G A 375 92.703 100.783 38.748 1.00 39.17 O
ATOM 20 N1 G A 375 94.234 101.724 40.154 1.00 37.82 N
ATOM 21 C2 G A 375 95.298 101.675 41.022 1.00 37.92 C
ATOM 22 N2 G A 375 95.699 102.850 41.548 1.00 38.74 N
ATOM 23 N3 G A 375 95.923 100.561 41.352 1.00 37.07 N
ATOM 24 C4 G A 375 95.392 99.485 40.733 1.00 37.61 C
ATOM 25 P G A 376 94.479 95.769 45.304 1.00 38.59 P
ATOM 26 OP1 G A 376 94.606 95.127 46.637 1.00 39.27 O
ATOM 27 OP2 G A 376 93.499 95.236 44.321 1.00 37.18 O
ATOM 28 O5' G A 376 94.140 97.311 45.512 1.00 40.04 O
TER

ATOM 1 O3' G B2109 98.096 110.990 42.325 1.00 37.66 O
ATOM 2 P A B2110 97.565 110.217 43.625 1.00 37.11 P
ATOM 3 OP1 A B2110 96.086 110.326 43.574 1.00 36.48 O
ATOM 4 OP2 A B2110 98.300 110.732 44.813 1.00 35.04 O
ATOM 5 O5' A B2110 98.025 108.705 43.391 1.00 37.20 O
ATOM 6 C5' A B2110 97.367 107.864 42.418 1.00 37.20 C
ATOM 7 C4' A B2110 98.025 106.497 42.343 1.00 37.26 C
ATOM 8 O4' A B2110 99.420 106.645 41.970 1.00 37.18 O
ATOM 9 C3' A B2110 98.096 105.660 43.611 1.00 37.09 C
ATOM 10 O3' A B2110 96.868 105.007 43.907 1.00 37.97 O
ATOM 11 C2' A B2110 99.202 104.667 43.269 1.00 37.06 C
ATOM 12 O2' A B2110 98.790 103.600 42.433 1.00 38.21 O
ATOM 13 C1' A B2110 100.172 105.562 42.498 1.00 36.18 C
ATOM 14 N9 A B2110 101.222 106.091 43.366 1.00 33.93 N
ATOM 15 C8 A B2110 101.311 107.323 43.962 1.00 32.95 C
ATOM 16 N7 A B2110 102.364 107.465 44.728 1.00 32.07 N
ATOM 17 C5 A B2110 103.017 106.247 44.622 1.00 33.18 C
ATOM 18 C6 A B2110 104.190 105.753 45.210 1.00 32.39 C
ATOM 19 N6 A B2110 104.939 106.451 46.060 1.00 33.93 N
ATOM 20 N1 A B2110 104.569 104.498 44.896 1.00 32.38 N
ATOM 21 C2 A B2110 103.806 103.789 44.051 1.00 33.32 C
ATOM 22 N3 A B2110 102.677 104.140 43.442 1.00 33.65 N
ATOM 23 C4 A B2110 102.333 105.397 43.775 1.00 33.99 C
ATOM 24 P U B2111 96.435 104.778 45.442 1.00 37.23 P
ATOM 25 OP1 U B2111 95.024 104.332 45.420 1.00 39.00 O
ATOM 26 OP2 U B2111 96.815 105.974 46.232 1.00 35.93 O
ATOM 27 O5' U B2111 97.324 103.548 45.923 1.00 36.31 O
TER

Atoms:
OP1: (94.878,91.808,42.099)
OP2: (93.340,93.064,40.470)
C3': (96.030,96.249,43.271)
C1': (96.927,97.732,41.701)
C5': (96.706,94.132,41.943)
O6: (92.703,100.783,38.748)
O4': (97.267,96.407,41.313)
C8: (95.009,97.428,40.058)
C2: (95.298,101.675,41.022)
C6: (93.670,100.627,39.510)
C5: (94.333,99.432,39.851)
C4: (95.392,99.485,40.733)
P: (94.702,92.753,40.968)
C4': (97.065,95.513,42.438)
C2': (96.537,97.676,43.177)
O2': (97.687,97.887,43.980)
N1: (94.234,101.724,40.154)
N2: (95.699,102.850,41.548)
N3: (95.923,100.561,41.352)
N7: (94.103,98.130,39.434)
N9: (95.823,98.190,40.863)
O5': (95.400,94.128,41.351)
O3': (95.923,95.791,44.607)
OP1: (96.086,110.326,43.574)
OP2: (98.300,110.732,44.813)
C3': (98.096,105.660,43.611)
C1': (100.172,105.562,42.498)
C5': (97.367,107.864,42.418)
O4': (99.420,106.645,41.970)
C8: (101.311,107.323,43.962)
O2': (98.790,103.600,42.433)
C6: (104.190,105.753,45.210)
C5: (103.017,106.247,44.622)
C4: (102.333,105.397,43.775)
P: (97.565,110.217,43.625)
C4': (98.025,106.497,42.343)
C2': (99.202,104.667,43.269)
C2: (103.806,103.789,44.051)
N1: (104.569,104.498,44.896)
N3: (102.677,104.140,43.442)
N6: (104.939,106.451,46.060)
N7: (102.364,107.465,44.728)
N9: (101.222,106.091,43.366)
O5': (98.025,108.705,43.391)
O3': (96.868,105.007,43.907)
Image (generated by PyMOL):
PyMOL image
show in jmol