Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A54:A60
Extra
PDB:
ATOM 1 O3' U A 53 51.166 148.815 38.145 1.00 53.12 O
ATOM 2 P G A 54 52.524 148.866 37.286 1.00 52.48 P
ATOM 3 OP1 G A 54 52.712 147.584 36.564 1.00 53.48 O
ATOM 4 OP2 G A 54 53.594 149.356 38.188 1.00 53.21 O
ATOM 5 O5' G A 54 52.232 149.994 36.205 1.00 53.81 O
ATOM 6 C5' G A 54 51.117 149.881 35.305 1.00 53.51 C
ATOM 7 C4' G A 54 50.927 151.176 34.561 1.00 54.73 C
ATOM 8 O4' G A 54 50.634 152.235 35.509 1.00 55.80 O
ATOM 9 C3' G A 54 52.170 151.676 33.849 1.00 54.61 C
ATOM 10 O3' G A 54 52.370 151.075 32.594 1.00 53.14 O
ATOM 11 C2' G A 54 51.923 153.166 33.729 1.00 55.67 C
ATOM 12 O2' G A 54 51.097 153.533 32.654 1.00 56.52 O
ATOM 13 C1' G A 54 51.210 153.450 35.043 1.00 57.42 C
ATOM 14 N9 G A 54 52.146 153.958 36.034 1.00 59.90 N
ATOM 15 C8 G A 54 52.725 153.275 37.076 1.00 60.72 C
ATOM 16 N7 G A 54 53.466 154.036 37.831 1.00 60.70 N
ATOM 17 C5 G A 54 53.383 155.291 37.239 1.00 61.00 C
ATOM 18 C6 G A 54 53.943 156.520 37.627 1.00 61.88 C
ATOM 19 O6 G A 54 54.634 156.769 38.623 1.00 63.93 O
ATOM 20 N1 G A 54 53.613 157.536 36.735 1.00 61.23 N
ATOM 21 C2 G A 54 52.832 157.387 35.624 1.00 59.91 C
ATOM 22 N2 G A 54 52.646 158.482 34.879 1.00 59.90 N
ATOM 23 N3 G A 54 52.280 156.251 35.267 1.00 60.05 N
ATOM 24 C4 G A 54 52.595 155.252 36.115 1.00 60.28 C
ATOM 25 P C A 55 53.867 150.813 32.095 1.00 53.42 P
ATOM 26 OP1 C A 55 53.816 150.003 30.850 1.00 55.26 O
ATOM 27 OP2 C A 55 54.608 150.301 33.267 1.00 54.82 O
ATOM 28 O5' C A 55 54.421 152.269 31.755 1.00 55.53 O
TER
ATOM 1 O3' A B 59 53.702 160.952 31.461 1.00 52.28 O
ATOM 2 P A B 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 3 OP1 A B 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 4 OP2 A B 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 5 O5' A B 60 51.552 160.166 32.566 1.00 54.30 O
ATOM 6 C5' A B 60 50.173 160.507 32.782 1.00 55.06 C
ATOM 7 C4' A B 60 49.317 159.263 32.737 1.00 55.23 C
ATOM 8 O4' A B 60 49.806 158.328 33.715 1.00 55.20 O
ATOM 9 C3' A B 60 47.829 159.417 33.008 1.00 56.32 C
ATOM 10 O3' A B 60 47.152 158.393 32.303 1.00 58.23 O
ATOM 11 C2' A B 60 47.709 159.098 34.490 1.00 56.75 C
ATOM 12 O2' A B 60 46.438 158.522 34.765 1.00 57.19 O
ATOM 13 C1' A B 60 48.806 158.049 34.666 1.00 56.21 C
ATOM 14 N9 A B 60 49.460 158.042 35.977 1.00 57.74 N
ATOM 15 C8 A B 60 49.564 156.978 36.831 1.00 57.76 C
ATOM 16 N7 A B 60 50.262 157.230 37.909 1.00 58.36 N
ATOM 17 C5 A B 60 50.628 158.559 37.771 1.00 58.31 C
ATOM 18 C6 A B 60 51.390 159.414 38.584 1.00 57.48 C
ATOM 19 N6 A B 60 51.907 159.055 39.760 1.00 57.52 N
ATOM 20 N1 A B 60 51.599 160.667 38.149 1.00 57.49 N
ATOM 21 C2 A B 60 51.061 161.034 36.981 1.00 58.92 C
ATOM 22 N3 A B 60 50.313 160.325 36.130 1.00 59.03 N
ATOM 23 C4 A B 60 50.133 159.078 36.589 1.00 58.34 C
ATOM 24 P G B 61 46.673 158.645 30.791 1.00 60.44 P
ATOM 25 OP1 G B 61 46.146 160.042 30.627 1.00 57.78 O
ATOM 26 OP2 G B 61 45.824 157.480 30.423 1.00 59.54 O
ATOM 27 O5' G B 61 48.022 158.535 29.960 1.00 57.17 O
TER
ATOM 2 P G A 54 52.524 148.866 37.286 1.00 52.48 P
ATOM 3 OP1 G A 54 52.712 147.584 36.564 1.00 53.48 O
ATOM 4 OP2 G A 54 53.594 149.356 38.188 1.00 53.21 O
ATOM 5 O5' G A 54 52.232 149.994 36.205 1.00 53.81 O
ATOM 6 C5' G A 54 51.117 149.881 35.305 1.00 53.51 C
ATOM 7 C4' G A 54 50.927 151.176 34.561 1.00 54.73 C
ATOM 8 O4' G A 54 50.634 152.235 35.509 1.00 55.80 O
ATOM 9 C3' G A 54 52.170 151.676 33.849 1.00 54.61 C
ATOM 10 O3' G A 54 52.370 151.075 32.594 1.00 53.14 O
ATOM 11 C2' G A 54 51.923 153.166 33.729 1.00 55.67 C
ATOM 12 O2' G A 54 51.097 153.533 32.654 1.00 56.52 O
ATOM 13 C1' G A 54 51.210 153.450 35.043 1.00 57.42 C
ATOM 14 N9 G A 54 52.146 153.958 36.034 1.00 59.90 N
ATOM 15 C8 G A 54 52.725 153.275 37.076 1.00 60.72 C
ATOM 16 N7 G A 54 53.466 154.036 37.831 1.00 60.70 N
ATOM 17 C5 G A 54 53.383 155.291 37.239 1.00 61.00 C
ATOM 18 C6 G A 54 53.943 156.520 37.627 1.00 61.88 C
ATOM 19 O6 G A 54 54.634 156.769 38.623 1.00 63.93 O
ATOM 20 N1 G A 54 53.613 157.536 36.735 1.00 61.23 N
ATOM 21 C2 G A 54 52.832 157.387 35.624 1.00 59.91 C
ATOM 22 N2 G A 54 52.646 158.482 34.879 1.00 59.90 N
ATOM 23 N3 G A 54 52.280 156.251 35.267 1.00 60.05 N
ATOM 24 C4 G A 54 52.595 155.252 36.115 1.00 60.28 C
ATOM 25 P C A 55 53.867 150.813 32.095 1.00 53.42 P
ATOM 26 OP1 C A 55 53.816 150.003 30.850 1.00 55.26 O
ATOM 27 OP2 C A 55 54.608 150.301 33.267 1.00 54.82 O
ATOM 28 O5' C A 55 54.421 152.269 31.755 1.00 55.53 O
TER
ATOM 1 O3' A B 59 53.702 160.952 31.461 1.00 52.28 O
ATOM 2 P A B 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 3 OP1 A B 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 4 OP2 A B 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 5 O5' A B 60 51.552 160.166 32.566 1.00 54.30 O
ATOM 6 C5' A B 60 50.173 160.507 32.782 1.00 55.06 C
ATOM 7 C4' A B 60 49.317 159.263 32.737 1.00 55.23 C
ATOM 8 O4' A B 60 49.806 158.328 33.715 1.00 55.20 O
ATOM 9 C3' A B 60 47.829 159.417 33.008 1.00 56.32 C
ATOM 10 O3' A B 60 47.152 158.393 32.303 1.00 58.23 O
ATOM 11 C2' A B 60 47.709 159.098 34.490 1.00 56.75 C
ATOM 12 O2' A B 60 46.438 158.522 34.765 1.00 57.19 O
ATOM 13 C1' A B 60 48.806 158.049 34.666 1.00 56.21 C
ATOM 14 N9 A B 60 49.460 158.042 35.977 1.00 57.74 N
ATOM 15 C8 A B 60 49.564 156.978 36.831 1.00 57.76 C
ATOM 16 N7 A B 60 50.262 157.230 37.909 1.00 58.36 N
ATOM 17 C5 A B 60 50.628 158.559 37.771 1.00 58.31 C
ATOM 18 C6 A B 60 51.390 159.414 38.584 1.00 57.48 C
ATOM 19 N6 A B 60 51.907 159.055 39.760 1.00 57.52 N
ATOM 20 N1 A B 60 51.599 160.667 38.149 1.00 57.49 N
ATOM 21 C2 A B 60 51.061 161.034 36.981 1.00 58.92 C
ATOM 22 N3 A B 60 50.313 160.325 36.130 1.00 59.03 N
ATOM 23 C4 A B 60 50.133 159.078 36.589 1.00 58.34 C
ATOM 24 P G B 61 46.673 158.645 30.791 1.00 60.44 P
ATOM 25 OP1 G B 61 46.146 160.042 30.627 1.00 57.78 O
ATOM 26 OP2 G B 61 45.824 157.480 30.423 1.00 59.54 O
ATOM 27 O5' G B 61 48.022 158.535 29.960 1.00 57.17 O
TER
Atoms:
OP1: (52.712,147.584,36.564)
OP2: (53.594,149.356,38.188)
C3': (52.170,151.676,33.849)
C1': (51.210,153.450,35.043)
C5': (51.117,149.881,35.305)
O6: (54.634,156.769,38.623)
O4': (50.634,152.235,35.509)
C8: (52.725,153.275,37.076)
C2: (52.832,157.387,35.624)
C6: (53.943,156.520,37.627)
C5: (53.383,155.291,37.239)
C4: (52.595,155.252,36.115)
P: (52.524,148.866,37.286)
C4': (50.927,151.176,34.561)
C2': (51.923,153.166,33.729)
O2': (51.097,153.533,32.654)
N1: (53.613,157.536,36.735)
N2: (52.646,158.482,34.879)
N3: (52.280,156.251,35.267)
N7: (53.466,154.036,37.831)
N9: (52.146,153.958,36.034)
O5': (52.232,149.994,36.205)
O3': (52.370,151.075,32.594)
OP2: (53.594,149.356,38.188)
C3': (52.170,151.676,33.849)
C1': (51.210,153.450,35.043)
C5': (51.117,149.881,35.305)
O6: (54.634,156.769,38.623)
O4': (50.634,152.235,35.509)
C8: (52.725,153.275,37.076)
C2: (52.832,157.387,35.624)
C6: (53.943,156.520,37.627)
C5: (53.383,155.291,37.239)
C4: (52.595,155.252,36.115)
P: (52.524,148.866,37.286)
C4': (50.927,151.176,34.561)
C2': (51.923,153.166,33.729)
O2': (51.097,153.533,32.654)
N1: (53.613,157.536,36.735)
N2: (52.646,158.482,34.879)
N3: (52.280,156.251,35.267)
N7: (53.466,154.036,37.831)
N9: (52.146,153.958,36.034)
O5': (52.232,149.994,36.205)
O3': (52.370,151.075,32.594)
OP1: (52.027,162.574,32.450)
OP2: (53.391,161.037,33.970)
C3': (47.829,159.417,33.008)
C1': (48.806,158.049,34.666)
C5': (50.173,160.507,32.782)
O4': (49.806,158.328,33.715)
C8: (49.564,156.978,36.831)
O2': (46.438,158.522,34.765)
C6: (51.390,159.414,38.584)
C5: (50.628,158.559,37.771)
C4: (50.133,159.078,36.589)
P: (52.691,161.268,32.687)
C4': (49.317,159.263,32.737)
C2': (47.709,159.098,34.490)
C2: (51.061,161.034,36.981)
N1: (51.599,160.667,38.149)
N3: (50.313,160.325,36.130)
N6: (51.907,159.055,39.760)
N7: (50.262,157.230,37.909)
N9: (49.460,158.042,35.977)
O5': (51.552,160.166,32.566)
O3': (47.152,158.393,32.303)
OP2: (53.391,161.037,33.970)
C3': (47.829,159.417,33.008)
C1': (48.806,158.049,34.666)
C5': (50.173,160.507,32.782)
O4': (49.806,158.328,33.715)
C8: (49.564,156.978,36.831)
O2': (46.438,158.522,34.765)
C6: (51.390,159.414,38.584)
C5: (50.628,158.559,37.771)
C4: (50.133,159.078,36.589)
P: (52.691,161.268,32.687)
C4': (49.317,159.263,32.737)
C2': (47.709,159.098,34.490)
C2: (51.061,161.034,36.981)
N1: (51.599,160.667,38.149)
N3: (50.313,160.325,36.130)
N6: (51.907,159.055,39.760)
N7: (50.262,157.230,37.909)
N9: (49.460,158.042,35.977)
O5': (51.552,160.166,32.566)
O3': (47.152,158.393,32.303)
Image (generated by PyMOL):