Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11872:12127
Extra
PDB:
ATOM 1 O3' G A1871 -16.019 28.134 101.208 1.00 51.00 O
ATOM 2 P G A1872 -15.564 29.289 100.205 1.00 50.32 P
ATOM 3 OP1 G A1872 -15.057 30.423 101.056 1.00 50.66 O
ATOM 4 OP2 G A1872 -16.708 29.539 99.279 1.00 50.50 O
ATOM 5 O5' G A1872 -14.354 28.598 99.428 1.00 49.68 O
ATOM 6 C5' G A1872 -13.990 29.001 98.129 1.00 49.46 C
ATOM 7 C4' G A1872 -13.836 27.817 97.232 1.00 48.95 C
ATOM 8 O4' G A1872 -15.122 27.158 97.072 1.00 49.08 O
ATOM 9 C3' G A1872 -13.378 28.118 95.818 1.00 48.68 C
ATOM 10 O3' G A1872 -11.973 28.250 95.720 1.00 48.36 O
ATOM 11 C2' G A1872 -13.951 26.946 95.016 1.00 48.39 C
ATOM 12 O2' G A1872 -13.131 25.791 95.123 1.00 47.92 O
ATOM 13 C1' G A1872 -15.261 26.673 95.760 1.00 48.77 C
ATOM 14 N9 G A1872 -16.375 27.364 95.109 1.00 49.13 N
ATOM 15 C8 G A1872 -17.015 28.537 95.384 1.00 49.65 C
ATOM 16 N7 G A1872 -17.930 28.856 94.501 1.00 49.84 N
ATOM 17 C5 G A1872 -17.847 27.819 93.599 1.00 49.41 C
ATOM 18 C6 G A1872 -18.562 27.587 92.433 1.00 49.38 C
ATOM 19 O6 G A1872 -19.452 28.274 91.957 1.00 49.74 O
ATOM 20 N1 G A1872 -18.115 26.422 91.831 1.00 48.88 N
ATOM 21 C2 G A1872 -17.152 25.603 92.320 1.00 48.49 C
ATOM 22 N2 G A1872 -16.871 24.511 91.649 1.00 48.06 N
ATOM 23 N3 G A1872 -16.496 25.799 93.388 1.00 48.51 N
ATOM 24 C4 G A1872 -16.889 26.921 93.951 1.00 48.98 C
ATOM 25 P G A1873 -11.333 29.327 94.726 1.00 52.09 P
ATOM 26 OP1 G A1873 -9.876 29.100 94.723 1.00 51.69 O
ATOM 27 OP2 G A1873 -11.831 30.632 95.114 1.00 52.63 O
ATOM 28 O5' G A1873 -11.937 28.934 93.328 1.00 51.91 O
TER
ATOM 1 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 2 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 3 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 4 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 5 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
ATOM 6 C5' A B2127 -16.018 19.920 88.564 1.00 46.65 C
ATOM 7 C4' A B2127 -15.997 20.407 89.985 1.00 46.91 C
ATOM 8 O4' A B2127 -16.060 19.279 90.882 1.00 46.80 O
ATOM 9 C3' A B2127 -14.755 21.162 90.426 1.00 46.81 C
ATOM 10 O3' A B2127 -14.771 22.520 90.055 1.00 47.07 O
ATOM 11 C2' A B2127 -14.742 20.940 91.936 1.00 46.95 C
ATOM 12 O2' A B2127 -15.642 21.813 92.598 1.00 47.46 O
ATOM 13 C1' A B2127 -15.285 19.523 92.034 1.00 46.81 C
ATOM 14 N9 A B2127 -14.194 18.552 92.068 1.00 46.34 N
ATOM 15 C8 A B2127 -13.708 17.740 91.083 1.00 45.92 C
ATOM 16 N7 A B2127 -12.704 17.000 91.439 1.00 45.58 N
ATOM 17 C5 A B2127 -12.505 17.382 92.739 1.00 45.79 C
ATOM 18 C6 A B2127 -11.581 16.977 93.666 1.00 45.62 C
ATOM 19 N6 A B2127 -10.648 16.091 93.420 1.00 45.20 N
ATOM 20 N1 A B2127 -11.650 17.539 94.871 1.00 45.93 N
ATOM 21 C2 A B2127 -12.594 18.458 95.110 1.00 46.37 C
ATOM 22 N3 A B2127 -13.548 18.957 94.333 1.00 46.58 N
ATOM 23 C4 A B2127 -13.414 18.345 93.143 1.00 46.25 C
ATOM 24 P A B2128 -13.477 23.183 89.368 1.00 47.41 P
ATOM 25 OP1 A B2128 -13.795 24.627 89.142 1.00 47.80 O
ATOM 26 OP2 A B2128 -13.094 22.325 88.181 1.00 46.99 O
ATOM 27 O5' A B2128 -12.387 23.059 90.505 1.00 47.26 O
TER
ATOM 2 P G A1872 -15.564 29.289 100.205 1.00 50.32 P
ATOM 3 OP1 G A1872 -15.057 30.423 101.056 1.00 50.66 O
ATOM 4 OP2 G A1872 -16.708 29.539 99.279 1.00 50.50 O
ATOM 5 O5' G A1872 -14.354 28.598 99.428 1.00 49.68 O
ATOM 6 C5' G A1872 -13.990 29.001 98.129 1.00 49.46 C
ATOM 7 C4' G A1872 -13.836 27.817 97.232 1.00 48.95 C
ATOM 8 O4' G A1872 -15.122 27.158 97.072 1.00 49.08 O
ATOM 9 C3' G A1872 -13.378 28.118 95.818 1.00 48.68 C
ATOM 10 O3' G A1872 -11.973 28.250 95.720 1.00 48.36 O
ATOM 11 C2' G A1872 -13.951 26.946 95.016 1.00 48.39 C
ATOM 12 O2' G A1872 -13.131 25.791 95.123 1.00 47.92 O
ATOM 13 C1' G A1872 -15.261 26.673 95.760 1.00 48.77 C
ATOM 14 N9 G A1872 -16.375 27.364 95.109 1.00 49.13 N
ATOM 15 C8 G A1872 -17.015 28.537 95.384 1.00 49.65 C
ATOM 16 N7 G A1872 -17.930 28.856 94.501 1.00 49.84 N
ATOM 17 C5 G A1872 -17.847 27.819 93.599 1.00 49.41 C
ATOM 18 C6 G A1872 -18.562 27.587 92.433 1.00 49.38 C
ATOM 19 O6 G A1872 -19.452 28.274 91.957 1.00 49.74 O
ATOM 20 N1 G A1872 -18.115 26.422 91.831 1.00 48.88 N
ATOM 21 C2 G A1872 -17.152 25.603 92.320 1.00 48.49 C
ATOM 22 N2 G A1872 -16.871 24.511 91.649 1.00 48.06 N
ATOM 23 N3 G A1872 -16.496 25.799 93.388 1.00 48.51 N
ATOM 24 C4 G A1872 -16.889 26.921 93.951 1.00 48.98 C
ATOM 25 P G A1873 -11.333 29.327 94.726 1.00 52.09 P
ATOM 26 OP1 G A1873 -9.876 29.100 94.723 1.00 51.69 O
ATOM 27 OP2 G A1873 -11.831 30.632 95.114 1.00 52.63 O
ATOM 28 O5' G A1873 -11.937 28.934 93.328 1.00 51.91 O
TER
ATOM 1 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 2 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 3 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 4 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 5 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
ATOM 6 C5' A B2127 -16.018 19.920 88.564 1.00 46.65 C
ATOM 7 C4' A B2127 -15.997 20.407 89.985 1.00 46.91 C
ATOM 8 O4' A B2127 -16.060 19.279 90.882 1.00 46.80 O
ATOM 9 C3' A B2127 -14.755 21.162 90.426 1.00 46.81 C
ATOM 10 O3' A B2127 -14.771 22.520 90.055 1.00 47.07 O
ATOM 11 C2' A B2127 -14.742 20.940 91.936 1.00 46.95 C
ATOM 12 O2' A B2127 -15.642 21.813 92.598 1.00 47.46 O
ATOM 13 C1' A B2127 -15.285 19.523 92.034 1.00 46.81 C
ATOM 14 N9 A B2127 -14.194 18.552 92.068 1.00 46.34 N
ATOM 15 C8 A B2127 -13.708 17.740 91.083 1.00 45.92 C
ATOM 16 N7 A B2127 -12.704 17.000 91.439 1.00 45.58 N
ATOM 17 C5 A B2127 -12.505 17.382 92.739 1.00 45.79 C
ATOM 18 C6 A B2127 -11.581 16.977 93.666 1.00 45.62 C
ATOM 19 N6 A B2127 -10.648 16.091 93.420 1.00 45.20 N
ATOM 20 N1 A B2127 -11.650 17.539 94.871 1.00 45.93 N
ATOM 21 C2 A B2127 -12.594 18.458 95.110 1.00 46.37 C
ATOM 22 N3 A B2127 -13.548 18.957 94.333 1.00 46.58 N
ATOM 23 C4 A B2127 -13.414 18.345 93.143 1.00 46.25 C
ATOM 24 P A B2128 -13.477 23.183 89.368 1.00 47.41 P
ATOM 25 OP1 A B2128 -13.795 24.627 89.142 1.00 47.80 O
ATOM 26 OP2 A B2128 -13.094 22.325 88.181 1.00 46.99 O
ATOM 27 O5' A B2128 -12.387 23.059 90.505 1.00 47.26 O
TER
Atoms:
OP1: (-15.057,30.423,101.056)
OP2: (-16.708,29.539,99.279)
C3': (-13.378,28.118,95.818)
C1': (-15.261,26.673,95.760)
C5': (-13.990,29.001,98.129)
O6: (-19.452,28.274,91.957)
O4': (-15.122,27.158,97.072)
C8: (-17.015,28.537,95.384)
C2: (-17.152,25.603,92.320)
C6: (-18.562,27.587,92.433)
C5: (-17.847,27.819,93.599)
C4: (-16.889,26.921,93.951)
P: (-15.564,29.289,100.205)
C4': (-13.836,27.817,97.232)
C2': (-13.951,26.946,95.016)
O2': (-13.131,25.791,95.123)
N1: (-18.115,26.422,91.831)
N2: (-16.871,24.511,91.649)
N3: (-16.496,25.799,93.388)
N7: (-17.930,28.856,94.501)
N9: (-16.375,27.364,95.109)
O5': (-14.354,28.598,99.428)
O3': (-11.973,28.250,95.720)
OP2: (-16.708,29.539,99.279)
C3': (-13.378,28.118,95.818)
C1': (-15.261,26.673,95.760)
C5': (-13.990,29.001,98.129)
O6: (-19.452,28.274,91.957)
O4': (-15.122,27.158,97.072)
C8: (-17.015,28.537,95.384)
C2: (-17.152,25.603,92.320)
C6: (-18.562,27.587,92.433)
C5: (-17.847,27.819,93.599)
C4: (-16.889,26.921,93.951)
P: (-15.564,29.289,100.205)
C4': (-13.836,27.817,97.232)
C2': (-13.951,26.946,95.016)
O2': (-13.131,25.791,95.123)
N1: (-18.115,26.422,91.831)
N2: (-16.871,24.511,91.649)
N3: (-16.496,25.799,93.388)
N7: (-17.930,28.856,94.501)
N9: (-16.375,27.364,95.109)
O5': (-14.354,28.598,99.428)
O3': (-11.973,28.250,95.720)
OP1: (-15.758,18.187,86.070)
OP2: (-13.590,17.310,87.042)
C3': (-14.755,21.162,90.426)
C1': (-15.285,19.523,92.034)
C5': (-16.018,19.920,88.564)
O4': (-16.060,19.279,90.882)
C8: (-13.708,17.740,91.083)
O2': (-15.642,21.813,92.598)
C6: (-11.581,16.977,93.666)
C5: (-12.505,17.382,92.739)
C4: (-13.414,18.345,93.143)
P: (-14.923,17.895,87.261)
C4': (-15.997,20.407,89.985)
C2': (-14.742,20.940,91.936)
C2: (-12.594,18.458,95.110)
N1: (-11.650,17.539,94.871)
N3: (-13.548,18.957,94.333)
N6: (-10.648,16.091,93.420)
N7: (-12.704,17.000,91.439)
N9: (-14.194,18.552,92.068)
O5': (-14.839,19.186,88.221)
O3': (-14.771,22.520,90.055)
OP2: (-13.590,17.310,87.042)
C3': (-14.755,21.162,90.426)
C1': (-15.285,19.523,92.034)
C5': (-16.018,19.920,88.564)
O4': (-16.060,19.279,90.882)
C8: (-13.708,17.740,91.083)
O2': (-15.642,21.813,92.598)
C6: (-11.581,16.977,93.666)
C5: (-12.505,17.382,92.739)
C4: (-13.414,18.345,93.143)
P: (-14.923,17.895,87.261)
C4': (-15.997,20.407,89.985)
C2': (-14.742,20.940,91.936)
C2: (-12.594,18.458,95.110)
N1: (-11.650,17.539,94.871)
N3: (-13.548,18.957,94.333)
N6: (-10.648,16.091,93.420)
N7: (-12.704,17.000,91.439)
N9: (-14.194,18.552,92.068)
O5': (-14.839,19.186,88.221)
O3': (-14.771,22.520,90.055)
Image (generated by PyMOL):