Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1390:A1500
Extra
PDB:
ATOM 1 O3' U A1389 -88.724 43.444 -5.309 1.00 17.20 O
ATOM 2 P G A1390 -88.238 42.928 -6.753 1.00 20.92 P
ATOM 3 OP1 G A1390 -86.808 43.328 -6.907 1.00 20.92 O
ATOM 4 OP2 G A1390 -89.228 43.417 -7.745 1.00 20.92 O
ATOM 5 O5' G A1390 -88.352 41.350 -6.629 1.00 20.92 O
ATOM 6 C5' G A1390 -87.964 40.677 -5.450 1.00 20.92 C
ATOM 7 C4' G A1390 -88.452 39.267 -5.480 1.00 20.92 C
ATOM 8 O4' G A1390 -89.746 39.179 -4.827 1.00 20.92 O
ATOM 9 C3' G A1390 -88.692 38.703 -6.863 1.00 20.92 C
ATOM 10 O3' G A1390 -87.497 38.235 -7.463 1.00 20.92 O
ATOM 11 C2' G A1390 -89.718 37.615 -6.598 1.00 20.92 C
ATOM 12 O2' G A1390 -89.094 36.462 -6.070 1.00 20.92 O
ATOM 13 C1' G A1390 -90.561 38.246 -5.493 1.00 20.92 C
ATOM 14 N9 G A1390 -91.731 38.962 -6.021 1.00 21.14 N
ATOM 15 C8 G A1390 -91.675 40.272 -6.342 1.00 21.14 C
ATOM 16 N7 G A1390 -92.799 40.742 -6.771 1.00 21.14 N
ATOM 17 C5 G A1390 -93.655 39.678 -6.737 1.00 21.14 C
ATOM 18 C6 G A1390 -95.003 39.645 -7.106 1.00 21.14 C
ATOM 19 O6 G A1390 -95.694 40.563 -7.550 1.00 21.14 O
ATOM 20 N1 G A1390 -95.530 38.395 -6.917 1.00 21.14 N
ATOM 21 C2 G A1390 -94.832 37.325 -6.451 1.00 21.14 C
ATOM 22 N2 G A1390 -95.530 36.191 -6.352 1.00 21.14 N
ATOM 23 N3 G A1390 -93.562 37.349 -6.108 1.00 21.14 N
ATOM 24 C4 G A1390 -93.027 38.565 -6.269 1.00 21.14 C
ATOM 25 P U A1391 -87.460 37.820 -9.017 1.00 10.04 P
ATOM 26 OP1 U A1391 -86.178 37.098 -9.238 1.00 10.04 O
ATOM 27 OP2 U A1391 -87.741 39.042 -9.822 1.00 10.04 O
ATOM 28 O5' U A1391 -88.691 36.819 -9.137 1.00 10.04 O
TER
ATOM 1 O3' C B1499 -89.465 31.444 -7.210 1.00 2.87 O
ATOM 2 P A B1500 -88.982 32.056 -5.816 1.00 17.15 P
ATOM 3 OP1 A B1500 -87.588 32.494 -6.011 1.00 17.15 O
ATOM 4 OP2 A B1500 -89.284 31.066 -4.762 1.00 17.15 O
ATOM 5 O5' A B1500 -89.923 33.312 -5.651 1.00 17.15 O
ATOM 6 C5' A B1500 -91.300 33.231 -5.976 1.00 17.15 C
ATOM 7 C4' A B1500 -92.122 34.027 -5.012 1.00 17.15 C
ATOM 8 O4' A B1500 -93.506 33.602 -5.100 1.00 17.15 O
ATOM 9 C3' A B1500 -91.714 33.858 -3.555 1.00 17.15 C
ATOM 10 O3' A B1500 -91.820 35.104 -2.869 1.00 17.15 O
ATOM 11 C2' A B1500 -92.736 32.876 -3.018 1.00 17.15 C
ATOM 12 O2' A B1500 -92.963 32.974 -1.637 1.00 17.15 O
ATOM 13 C1' A B1500 -93.969 33.261 -3.815 1.00 17.15 C
ATOM 14 N9 A B1500 -94.961 32.194 -3.937 1.00 17.54 N
ATOM 15 C8 A B1500 -94.921 30.893 -3.513 1.00 17.54 C
ATOM 16 N7 A B1500 -96.024 30.232 -3.767 1.00 17.54 N
ATOM 17 C5 A B1500 -96.854 31.170 -4.379 1.00 17.54 C
ATOM 18 C6 A B1500 -98.174 31.136 -4.895 1.00 17.54 C
ATOM 19 N6 A B1500 -98.995 30.074 -4.913 1.00 17.54 N
ATOM 20 N1 A B1500 -98.644 32.290 -5.421 1.00 17.54 N
ATOM 21 C2 A B1500 -97.873 33.382 -5.441 1.00 17.54 C
ATOM 22 N3 A B1500 -96.640 33.537 -4.990 1.00 17.54 N
ATOM 23 C4 A B1500 -96.196 32.385 -4.473 1.00 17.54 C
ATOM 24 P A B1501 -90.545 35.663 -2.073 1.00 5.87 P
ATOM 25 OP1 A B1501 -90.963 36.891 -1.344 1.00 5.87 O
ATOM 26 OP2 A B1501 -89.440 35.769 -3.060 1.00 5.87 O
ATOM 27 O5' A B1501 -90.269 34.476 -1.039 1.00 5.87 O
TER
ATOM 2 P G A1390 -88.238 42.928 -6.753 1.00 20.92 P
ATOM 3 OP1 G A1390 -86.808 43.328 -6.907 1.00 20.92 O
ATOM 4 OP2 G A1390 -89.228 43.417 -7.745 1.00 20.92 O
ATOM 5 O5' G A1390 -88.352 41.350 -6.629 1.00 20.92 O
ATOM 6 C5' G A1390 -87.964 40.677 -5.450 1.00 20.92 C
ATOM 7 C4' G A1390 -88.452 39.267 -5.480 1.00 20.92 C
ATOM 8 O4' G A1390 -89.746 39.179 -4.827 1.00 20.92 O
ATOM 9 C3' G A1390 -88.692 38.703 -6.863 1.00 20.92 C
ATOM 10 O3' G A1390 -87.497 38.235 -7.463 1.00 20.92 O
ATOM 11 C2' G A1390 -89.718 37.615 -6.598 1.00 20.92 C
ATOM 12 O2' G A1390 -89.094 36.462 -6.070 1.00 20.92 O
ATOM 13 C1' G A1390 -90.561 38.246 -5.493 1.00 20.92 C
ATOM 14 N9 G A1390 -91.731 38.962 -6.021 1.00 21.14 N
ATOM 15 C8 G A1390 -91.675 40.272 -6.342 1.00 21.14 C
ATOM 16 N7 G A1390 -92.799 40.742 -6.771 1.00 21.14 N
ATOM 17 C5 G A1390 -93.655 39.678 -6.737 1.00 21.14 C
ATOM 18 C6 G A1390 -95.003 39.645 -7.106 1.00 21.14 C
ATOM 19 O6 G A1390 -95.694 40.563 -7.550 1.00 21.14 O
ATOM 20 N1 G A1390 -95.530 38.395 -6.917 1.00 21.14 N
ATOM 21 C2 G A1390 -94.832 37.325 -6.451 1.00 21.14 C
ATOM 22 N2 G A1390 -95.530 36.191 -6.352 1.00 21.14 N
ATOM 23 N3 G A1390 -93.562 37.349 -6.108 1.00 21.14 N
ATOM 24 C4 G A1390 -93.027 38.565 -6.269 1.00 21.14 C
ATOM 25 P U A1391 -87.460 37.820 -9.017 1.00 10.04 P
ATOM 26 OP1 U A1391 -86.178 37.098 -9.238 1.00 10.04 O
ATOM 27 OP2 U A1391 -87.741 39.042 -9.822 1.00 10.04 O
ATOM 28 O5' U A1391 -88.691 36.819 -9.137 1.00 10.04 O
TER
ATOM 1 O3' C B1499 -89.465 31.444 -7.210 1.00 2.87 O
ATOM 2 P A B1500 -88.982 32.056 -5.816 1.00 17.15 P
ATOM 3 OP1 A B1500 -87.588 32.494 -6.011 1.00 17.15 O
ATOM 4 OP2 A B1500 -89.284 31.066 -4.762 1.00 17.15 O
ATOM 5 O5' A B1500 -89.923 33.312 -5.651 1.00 17.15 O
ATOM 6 C5' A B1500 -91.300 33.231 -5.976 1.00 17.15 C
ATOM 7 C4' A B1500 -92.122 34.027 -5.012 1.00 17.15 C
ATOM 8 O4' A B1500 -93.506 33.602 -5.100 1.00 17.15 O
ATOM 9 C3' A B1500 -91.714 33.858 -3.555 1.00 17.15 C
ATOM 10 O3' A B1500 -91.820 35.104 -2.869 1.00 17.15 O
ATOM 11 C2' A B1500 -92.736 32.876 -3.018 1.00 17.15 C
ATOM 12 O2' A B1500 -92.963 32.974 -1.637 1.00 17.15 O
ATOM 13 C1' A B1500 -93.969 33.261 -3.815 1.00 17.15 C
ATOM 14 N9 A B1500 -94.961 32.194 -3.937 1.00 17.54 N
ATOM 15 C8 A B1500 -94.921 30.893 -3.513 1.00 17.54 C
ATOM 16 N7 A B1500 -96.024 30.232 -3.767 1.00 17.54 N
ATOM 17 C5 A B1500 -96.854 31.170 -4.379 1.00 17.54 C
ATOM 18 C6 A B1500 -98.174 31.136 -4.895 1.00 17.54 C
ATOM 19 N6 A B1500 -98.995 30.074 -4.913 1.00 17.54 N
ATOM 20 N1 A B1500 -98.644 32.290 -5.421 1.00 17.54 N
ATOM 21 C2 A B1500 -97.873 33.382 -5.441 1.00 17.54 C
ATOM 22 N3 A B1500 -96.640 33.537 -4.990 1.00 17.54 N
ATOM 23 C4 A B1500 -96.196 32.385 -4.473 1.00 17.54 C
ATOM 24 P A B1501 -90.545 35.663 -2.073 1.00 5.87 P
ATOM 25 OP1 A B1501 -90.963 36.891 -1.344 1.00 5.87 O
ATOM 26 OP2 A B1501 -89.440 35.769 -3.060 1.00 5.87 O
ATOM 27 O5' A B1501 -90.269 34.476 -1.039 1.00 5.87 O
TER
Atoms:
OP1: (-86.808,43.328,-6.907)
OP2: (-89.228,43.417,-7.745)
C3': (-88.692,38.703,-6.863)
C1': (-90.561,38.246,-5.493)
C5': (-87.964,40.677,-5.450)
O6: (-95.694,40.563,-7.550)
O4': (-89.746,39.179,-4.827)
C8: (-91.675,40.272,-6.342)
C2: (-94.832,37.325,-6.451)
C6: (-95.003,39.645,-7.106)
C5: (-93.655,39.678,-6.737)
C4: (-93.027,38.565,-6.269)
P: (-88.238,42.928,-6.753)
C4': (-88.452,39.267,-5.480)
C2': (-89.718,37.615,-6.598)
O2': (-89.094,36.462,-6.070)
N1: (-95.530,38.395,-6.917)
N2: (-95.530,36.191,-6.352)
N3: (-93.562,37.349,-6.108)
N7: (-92.799,40.742,-6.771)
N9: (-91.731,38.962,-6.021)
O5': (-88.352,41.350,-6.629)
O3': (-87.497,38.235,-7.463)
OP2: (-89.228,43.417,-7.745)
C3': (-88.692,38.703,-6.863)
C1': (-90.561,38.246,-5.493)
C5': (-87.964,40.677,-5.450)
O6: (-95.694,40.563,-7.550)
O4': (-89.746,39.179,-4.827)
C8: (-91.675,40.272,-6.342)
C2: (-94.832,37.325,-6.451)
C6: (-95.003,39.645,-7.106)
C5: (-93.655,39.678,-6.737)
C4: (-93.027,38.565,-6.269)
P: (-88.238,42.928,-6.753)
C4': (-88.452,39.267,-5.480)
C2': (-89.718,37.615,-6.598)
O2': (-89.094,36.462,-6.070)
N1: (-95.530,38.395,-6.917)
N2: (-95.530,36.191,-6.352)
N3: (-93.562,37.349,-6.108)
N7: (-92.799,40.742,-6.771)
N9: (-91.731,38.962,-6.021)
O5': (-88.352,41.350,-6.629)
O3': (-87.497,38.235,-7.463)
OP1: (-87.588,32.494,-6.011)
OP2: (-89.284,31.066,-4.762)
C3': (-91.714,33.858,-3.555)
C1': (-93.969,33.261,-3.815)
C5': (-91.300,33.231,-5.976)
O4': (-93.506,33.602,-5.100)
C8: (-94.921,30.893,-3.513)
O2': (-92.963,32.974,-1.637)
C6: (-98.174,31.136,-4.895)
C5: (-96.854,31.170,-4.379)
C4: (-96.196,32.385,-4.473)
P: (-88.982,32.056,-5.816)
C4': (-92.122,34.027,-5.012)
C2': (-92.736,32.876,-3.018)
C2: (-97.873,33.382,-5.441)
N1: (-98.644,32.290,-5.421)
N3: (-96.640,33.537,-4.990)
N6: (-98.995,30.074,-4.913)
N7: (-96.024,30.232,-3.767)
N9: (-94.961,32.194,-3.937)
O5': (-89.923,33.312,-5.651)
O3': (-91.820,35.104,-2.869)
OP2: (-89.284,31.066,-4.762)
C3': (-91.714,33.858,-3.555)
C1': (-93.969,33.261,-3.815)
C5': (-91.300,33.231,-5.976)
O4': (-93.506,33.602,-5.100)
C8: (-94.921,30.893,-3.513)
O2': (-92.963,32.974,-1.637)
C6: (-98.174,31.136,-4.895)
C5: (-96.854,31.170,-4.379)
C4: (-96.196,32.385,-4.473)
P: (-88.982,32.056,-5.816)
C4': (-92.122,34.027,-5.012)
C2': (-92.736,32.876,-3.018)
C2: (-97.873,33.382,-5.441)
N1: (-98.644,32.290,-5.421)
N3: (-96.640,33.537,-4.990)
N6: (-98.995,30.074,-4.913)
N7: (-96.024,30.232,-3.767)
N9: (-94.961,32.194,-3.937)
O5': (-89.923,33.312,-5.651)
O3': (-91.820,35.104,-2.869)
Image (generated by PyMOL):