ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A1080:A1207

Extra

PDB:
ATOM 1 O3' U A1079 40.044 103.003 133.074 1.00 39.80 O
ATOM 2 P G A1080 39.919 103.602 131.596 1.00 38.19 P
ATOM 3 OP1 G A1080 41.021 102.954 130.880 1.00 39.40 O
ATOM 4 OP2 G A1080 39.884 105.066 131.679 1.00 39.09 O
ATOM 5 O5' G A1080 38.493 103.080 131.094 1.00 38.11 O
ATOM 6 C5' G A1080 38.168 101.662 131.094 1.00 37.58 C
ATOM 7 C4' G A1080 36.667 101.443 131.041 1.00 36.91 C
ATOM 8 O4' G A1080 36.029 101.983 132.220 1.00 37.56 O
ATOM 9 C3' G A1080 35.955 102.112 129.886 1.00 36.07 C
ATOM 10 O3' G A1080 36.057 101.312 128.739 1.00 37.25 O
ATOM 11 C2' G A1080 34.534 102.273 130.400 1.00 35.08 C
ATOM 12 O2' G A1080 33.709 101.140 130.274 1.00 35.54 O
ATOM 13 C1' G A1080 34.807 102.602 131.864 1.00 35.39 C
ATOM 14 N9 G A1080 34.980 104.040 131.991 1.00 35.20 N
ATOM 15 C8 G A1080 36.148 104.772 131.981 1.00 35.95 C
ATOM 16 N7 G A1080 35.941 106.060 132.018 1.00 37.36 N
ATOM 17 C5 G A1080 34.560 106.173 132.075 1.00 36.72 C
ATOM 18 C6 G A1080 33.731 107.317 132.109 1.00 37.23 C
ATOM 19 O6 G A1080 34.066 108.510 132.092 1.00 36.45 O
ATOM 20 N1 G A1080 32.378 106.969 132.156 1.00 35.66 N
ATOM 21 C2 G A1080 31.897 105.689 132.162 1.00 35.60 C
ATOM 22 N2 G A1080 30.579 105.547 132.169 1.00 34.82 N
ATOM 23 N3 G A1080 32.659 104.621 132.147 1.00 37.11 N
ATOM 24 C4 G A1080 33.966 104.932 132.091 1.00 36.08 C
ATOM 25 P U A1081 35.946 101.980 127.299 1.00 38.91 P
ATOM 26 OP1 U A1081 35.849 100.820 126.388 1.00 38.72 O
ATOM 27 OP2 U A1081 37.018 102.977 127.116 1.00 36.60 O
ATOM 28 O5' U A1081 34.534 102.707 127.345 1.00 37.82 O
TER

ATOM 1 O3' A B1206 25.656 104.349 130.187 1.00 35.36 O
ATOM 2 P A B1207 26.139 102.895 129.786 1.00 36.62 P
ATOM 3 OP1 A B1207 26.451 102.931 128.353 1.00 35.94 O
ATOM 4 OP2 A B1207 25.091 101.981 130.293 1.00 36.88 O
ATOM 5 O5' A B1207 27.485 102.693 130.612 1.00 37.42 O
ATOM 6 C5' A B1207 28.735 103.252 130.175 1.00 38.13 C
ATOM 7 C4' A B1207 29.865 102.673 130.988 1.00 38.81 C
ATOM 8 O4' A B1207 29.579 102.904 132.388 1.00 39.34 O
ATOM 9 C3' A B1207 30.010 101.166 130.893 1.00 39.39 C
ATOM 10 O3' A B1207 30.788 100.754 129.785 1.00 38.84 O
ATOM 11 C2' A B1207 30.670 100.801 132.211 1.00 40.22 C
ATOM 12 O2' A B1207 32.052 101.074 132.184 1.00 41.30 O
ATOM 13 C1' A B1207 29.990 101.786 133.161 1.00 41.10 C
ATOM 14 N9 A B1207 28.832 101.281 133.921 1.00 43.72 N
ATOM 15 C8 A B1207 27.508 101.621 133.766 1.00 42.69 C
ATOM 16 N7 A B1207 26.712 101.063 134.644 1.00 44.16 N
ATOM 17 C5 A B1207 27.559 100.286 135.424 1.00 45.71 C
ATOM 18 C6 A B1207 27.328 99.443 136.541 1.00 47.17 C
ATOM 19 N6 A B1207 26.129 99.243 137.098 1.00 48.02 N
ATOM 20 N1 A B1207 28.390 98.803 137.069 1.00 47.13 N
ATOM 21 C2 A B1207 29.594 98.994 136.515 1.00 45.09 C
ATOM 22 N3 A B1207 29.937 99.756 135.482 1.00 44.57 N
ATOM 23 C4 A B1207 28.864 100.389 134.976 1.00 44.93 C
ATOM 24 P U B1208 30.467 99.354 129.096 1.00 39.39 P
ATOM 25 OP1 U B1208 31.343 99.212 127.916 1.00 40.86 O
ATOM 26 OP2 U B1208 29.016 99.338 128.928 1.00 43.38 O
ATOM 27 O5' U B1208 30.753 98.248 130.217 1.00 43.42 O
TER

Atoms:
OP1: (41.021,102.954,130.880)
OP2: (39.884,105.066,131.679)
C3': (35.955,102.112,129.886)
C1': (34.807,102.602,131.864)
C5': (38.168,101.662,131.094)
O6: (34.066,108.510,132.092)
O4': (36.029,101.983,132.220)
C8: (36.148,104.772,131.981)
C2: (31.897,105.689,132.162)
C6: (33.731,107.317,132.109)
C5: (34.560,106.173,132.075)
C4: (33.966,104.932,132.091)
P: (39.919,103.602,131.596)
C4': (36.667,101.443,131.041)
C2': (34.534,102.273,130.400)
O2': (33.709,101.140,130.274)
N1: (32.378,106.969,132.156)
N2: (30.579,105.547,132.169)
N3: (32.659,104.621,132.147)
N7: (35.941,106.060,132.018)
N9: (34.980,104.040,131.991)
O5': (38.493,103.080,131.094)
O3': (36.057,101.312,128.739)
OP1: (26.451,102.931,128.353)
OP2: (25.091,101.981,130.293)
C3': (30.010,101.166,130.893)
C1': (29.990,101.786,133.161)
C5': (28.735,103.252,130.175)
O4': (29.579,102.904,132.388)
C8: (27.508,101.621,133.766)
O2': (32.052,101.074,132.184)
C6: (27.328,99.443,136.541)
C5: (27.559,100.286,135.424)
C4: (28.864,100.389,134.976)
P: (26.139,102.895,129.786)
C4': (29.865,102.673,130.988)
C2': (30.670,100.801,132.211)
C2: (29.594,98.994,136.515)
N1: (28.390,98.803,137.069)
N3: (29.937,99.756,135.482)
N6: (26.129,99.243,137.098)
N7: (26.712,101.063,134.644)
N9: (28.832,101.281,133.921)
O5': (27.485,102.693,130.612)
O3': (30.788,100.754,129.785)
Image (generated by PyMOL):
PyMOL image
show in jmol