Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01080:01207
Extra
PDB:
ATOM 1 O3' U A1079 40.181 103.697 133.126 1.00 43.72 O
ATOM 2 P G A1080 39.975 103.918 131.547 1.00 44.67 P
ATOM 3 OP1 G A1080 40.996 103.085 130.881 1.00 44.45 O
ATOM 4 OP2 G A1080 39.953 105.382 131.309 1.00 42.91 O
ATOM 5 O5' G A1080 38.529 103.326 131.212 1.00 42.92 O
ATOM 6 C5' G A1080 38.286 101.907 131.134 1.00 40.86 C
ATOM 7 C4' G A1080 36.796 101.636 131.058 1.00 41.48 C
ATOM 8 O4' G A1080 36.157 102.216 132.226 1.00 42.65 O
ATOM 9 C3' G A1080 36.043 102.249 129.885 1.00 41.15 C
ATOM 10 O3' G A1080 36.117 101.421 128.727 1.00 43.06 O
ATOM 11 C2' G A1080 34.624 102.341 130.432 1.00 40.11 C
ATOM 12 O2' G A1080 33.975 101.092 130.465 1.00 40.03 O
ATOM 13 C1' G A1080 34.893 102.760 131.874 1.00 39.74 C
ATOM 14 N9 G A1080 34.985 104.207 132.010 1.00 38.30 N
ATOM 15 C8 G A1080 36.138 104.948 132.068 1.00 38.64 C
ATOM 16 N7 G A1080 35.920 106.230 132.156 1.00 40.18 N
ATOM 17 C5 G A1080 34.538 106.342 132.168 1.00 38.51 C
ATOM 18 C6 G A1080 33.721 107.487 132.248 1.00 38.64 C
ATOM 19 O6 G A1080 34.066 108.670 132.344 1.00 38.17 O
ATOM 20 N1 G A1080 32.372 107.155 132.214 1.00 38.34 N
ATOM 21 C2 G A1080 31.876 105.881 132.125 1.00 38.61 C
ATOM 22 N2 G A1080 30.544 105.766 132.101 1.00 37.06 N
ATOM 23 N3 G A1080 32.633 104.798 132.063 1.00 39.99 N
ATOM 24 C4 G A1080 33.946 105.101 132.085 1.00 38.47 C
ATOM 25 P U A1081 35.858 102.053 127.271 1.00 45.07 P
ATOM 26 OP1 U A1081 35.714 100.928 126.307 1.00 42.55 O
ATOM 27 OP2 U A1081 36.869 103.110 127.030 1.00 43.62 O
ATOM 28 O5' U A1081 34.441 102.760 127.408 1.00 45.11 O
TER
ATOM 1 O3' A B1206 25.676 104.460 130.245 1.00 44.26 O
ATOM 2 P A B1207 26.073 103.008 129.685 1.00 45.50 P
ATOM 3 OP1 A B1207 26.435 103.214 128.260 1.00 45.29 O
ATOM 4 OP2 A B1207 25.017 102.028 130.037 1.00 46.37 O
ATOM 5 O5' A B1207 27.399 102.630 130.481 1.00 45.93 O
ATOM 6 C5' A B1207 28.659 103.243 130.141 1.00 49.35 C
ATOM 7 C4' A B1207 29.779 102.624 130.938 1.00 49.21 C
ATOM 8 O4' A B1207 29.581 102.907 132.344 1.00 49.26 O
ATOM 9 C3' A B1207 29.864 101.110 130.864 1.00 49.38 C
ATOM 10 O3' A B1207 30.564 100.703 129.701 1.00 49.75 O
ATOM 11 C2' A B1207 30.589 100.763 132.158 1.00 48.71 C
ATOM 12 O2' A B1207 31.978 101.006 132.091 1.00 48.33 O
ATOM 13 C1' A B1207 29.982 101.787 133.117 1.00 50.16 C
ATOM 14 N9 A B1207 28.818 101.300 133.863 1.00 51.29 N
ATOM 15 C8 A B1207 27.489 101.555 133.630 1.00 51.03 C
ATOM 16 N7 A B1207 26.683 100.970 134.477 1.00 51.53 N
ATOM 17 C5 A B1207 27.536 100.279 135.325 1.00 53.46 C
ATOM 18 C6 A B1207 27.300 99.443 136.426 1.00 54.35 C
ATOM 19 N6 A B1207 26.084 99.134 136.874 1.00 55.02 N
ATOM 20 N1 A B1207 28.373 98.915 137.055 1.00 55.40 N
ATOM 21 C2 A B1207 29.593 99.204 136.593 1.00 53.92 C
ATOM 22 N3 A B1207 29.942 99.964 135.562 1.00 54.01 N
ATOM 23 C4 A B1207 28.853 100.478 134.962 1.00 53.07 C
ATOM 24 P U B1208 30.268 99.265 129.059 1.00 51.74 P
ATOM 25 OP1 U B1208 31.239 99.070 127.961 1.00 54.39 O
ATOM 26 OP2 U B1208 28.822 99.132 128.792 1.00 53.98 O
ATOM 27 O5' U B1208 30.608 98.237 130.221 1.00 55.33 O
TER
ATOM 2 P G A1080 39.975 103.918 131.547 1.00 44.67 P
ATOM 3 OP1 G A1080 40.996 103.085 130.881 1.00 44.45 O
ATOM 4 OP2 G A1080 39.953 105.382 131.309 1.00 42.91 O
ATOM 5 O5' G A1080 38.529 103.326 131.212 1.00 42.92 O
ATOM 6 C5' G A1080 38.286 101.907 131.134 1.00 40.86 C
ATOM 7 C4' G A1080 36.796 101.636 131.058 1.00 41.48 C
ATOM 8 O4' G A1080 36.157 102.216 132.226 1.00 42.65 O
ATOM 9 C3' G A1080 36.043 102.249 129.885 1.00 41.15 C
ATOM 10 O3' G A1080 36.117 101.421 128.727 1.00 43.06 O
ATOM 11 C2' G A1080 34.624 102.341 130.432 1.00 40.11 C
ATOM 12 O2' G A1080 33.975 101.092 130.465 1.00 40.03 O
ATOM 13 C1' G A1080 34.893 102.760 131.874 1.00 39.74 C
ATOM 14 N9 G A1080 34.985 104.207 132.010 1.00 38.30 N
ATOM 15 C8 G A1080 36.138 104.948 132.068 1.00 38.64 C
ATOM 16 N7 G A1080 35.920 106.230 132.156 1.00 40.18 N
ATOM 17 C5 G A1080 34.538 106.342 132.168 1.00 38.51 C
ATOM 18 C6 G A1080 33.721 107.487 132.248 1.00 38.64 C
ATOM 19 O6 G A1080 34.066 108.670 132.344 1.00 38.17 O
ATOM 20 N1 G A1080 32.372 107.155 132.214 1.00 38.34 N
ATOM 21 C2 G A1080 31.876 105.881 132.125 1.00 38.61 C
ATOM 22 N2 G A1080 30.544 105.766 132.101 1.00 37.06 N
ATOM 23 N3 G A1080 32.633 104.798 132.063 1.00 39.99 N
ATOM 24 C4 G A1080 33.946 105.101 132.085 1.00 38.47 C
ATOM 25 P U A1081 35.858 102.053 127.271 1.00 45.07 P
ATOM 26 OP1 U A1081 35.714 100.928 126.307 1.00 42.55 O
ATOM 27 OP2 U A1081 36.869 103.110 127.030 1.00 43.62 O
ATOM 28 O5' U A1081 34.441 102.760 127.408 1.00 45.11 O
TER
ATOM 1 O3' A B1206 25.676 104.460 130.245 1.00 44.26 O
ATOM 2 P A B1207 26.073 103.008 129.685 1.00 45.50 P
ATOM 3 OP1 A B1207 26.435 103.214 128.260 1.00 45.29 O
ATOM 4 OP2 A B1207 25.017 102.028 130.037 1.00 46.37 O
ATOM 5 O5' A B1207 27.399 102.630 130.481 1.00 45.93 O
ATOM 6 C5' A B1207 28.659 103.243 130.141 1.00 49.35 C
ATOM 7 C4' A B1207 29.779 102.624 130.938 1.00 49.21 C
ATOM 8 O4' A B1207 29.581 102.907 132.344 1.00 49.26 O
ATOM 9 C3' A B1207 29.864 101.110 130.864 1.00 49.38 C
ATOM 10 O3' A B1207 30.564 100.703 129.701 1.00 49.75 O
ATOM 11 C2' A B1207 30.589 100.763 132.158 1.00 48.71 C
ATOM 12 O2' A B1207 31.978 101.006 132.091 1.00 48.33 O
ATOM 13 C1' A B1207 29.982 101.787 133.117 1.00 50.16 C
ATOM 14 N9 A B1207 28.818 101.300 133.863 1.00 51.29 N
ATOM 15 C8 A B1207 27.489 101.555 133.630 1.00 51.03 C
ATOM 16 N7 A B1207 26.683 100.970 134.477 1.00 51.53 N
ATOM 17 C5 A B1207 27.536 100.279 135.325 1.00 53.46 C
ATOM 18 C6 A B1207 27.300 99.443 136.426 1.00 54.35 C
ATOM 19 N6 A B1207 26.084 99.134 136.874 1.00 55.02 N
ATOM 20 N1 A B1207 28.373 98.915 137.055 1.00 55.40 N
ATOM 21 C2 A B1207 29.593 99.204 136.593 1.00 53.92 C
ATOM 22 N3 A B1207 29.942 99.964 135.562 1.00 54.01 N
ATOM 23 C4 A B1207 28.853 100.478 134.962 1.00 53.07 C
ATOM 24 P U B1208 30.268 99.265 129.059 1.00 51.74 P
ATOM 25 OP1 U B1208 31.239 99.070 127.961 1.00 54.39 O
ATOM 26 OP2 U B1208 28.822 99.132 128.792 1.00 53.98 O
ATOM 27 O5' U B1208 30.608 98.237 130.221 1.00 55.33 O
TER
Atoms:
OP1: (40.996,103.085,130.881)
OP2: (39.953,105.382,131.309)
C3': (36.043,102.249,129.885)
C1': (34.893,102.760,131.874)
C5': (38.286,101.907,131.134)
O6: (34.066,108.670,132.344)
O4': (36.157,102.216,132.226)
C8: (36.138,104.948,132.068)
C2: (31.876,105.881,132.125)
C6: (33.721,107.487,132.248)
C5: (34.538,106.342,132.168)
C4: (33.946,105.101,132.085)
P: (39.975,103.918,131.547)
C4': (36.796,101.636,131.058)
C2': (34.624,102.341,130.432)
O2': (33.975,101.092,130.465)
N1: (32.372,107.155,132.214)
N2: (30.544,105.766,132.101)
N3: (32.633,104.798,132.063)
N7: (35.920,106.230,132.156)
N9: (34.985,104.207,132.010)
O5': (38.529,103.326,131.212)
O3': (36.117,101.421,128.727)
OP2: (39.953,105.382,131.309)
C3': (36.043,102.249,129.885)
C1': (34.893,102.760,131.874)
C5': (38.286,101.907,131.134)
O6: (34.066,108.670,132.344)
O4': (36.157,102.216,132.226)
C8: (36.138,104.948,132.068)
C2: (31.876,105.881,132.125)
C6: (33.721,107.487,132.248)
C5: (34.538,106.342,132.168)
C4: (33.946,105.101,132.085)
P: (39.975,103.918,131.547)
C4': (36.796,101.636,131.058)
C2': (34.624,102.341,130.432)
O2': (33.975,101.092,130.465)
N1: (32.372,107.155,132.214)
N2: (30.544,105.766,132.101)
N3: (32.633,104.798,132.063)
N7: (35.920,106.230,132.156)
N9: (34.985,104.207,132.010)
O5': (38.529,103.326,131.212)
O3': (36.117,101.421,128.727)
OP1: (26.435,103.214,128.260)
OP2: (25.017,102.028,130.037)
C3': (29.864,101.110,130.864)
C1': (29.982,101.787,133.117)
C5': (28.659,103.243,130.141)
O4': (29.581,102.907,132.344)
C8: (27.489,101.555,133.630)
O2': (31.978,101.006,132.091)
C6: (27.300,99.443,136.426)
C5: (27.536,100.279,135.325)
C4: (28.853,100.478,134.962)
P: (26.073,103.008,129.685)
C4': (29.779,102.624,130.938)
C2': (30.589,100.763,132.158)
C2: (29.593,99.204,136.593)
N1: (28.373,98.915,137.055)
N3: (29.942,99.964,135.562)
N6: (26.084,99.134,136.874)
N7: (26.683,100.970,134.477)
N9: (28.818,101.300,133.863)
O5': (27.399,102.630,130.481)
O3': (30.564,100.703,129.701)
OP2: (25.017,102.028,130.037)
C3': (29.864,101.110,130.864)
C1': (29.982,101.787,133.117)
C5': (28.659,103.243,130.141)
O4': (29.581,102.907,132.344)
C8: (27.489,101.555,133.630)
O2': (31.978,101.006,132.091)
C6: (27.300,99.443,136.426)
C5: (27.536,100.279,135.325)
C4: (28.853,100.478,134.962)
P: (26.073,103.008,129.685)
C4': (29.779,102.624,130.938)
C2': (30.589,100.763,132.158)
C2: (29.593,99.204,136.593)
N1: (28.373,98.915,137.055)
N3: (29.942,99.964,135.562)
N6: (26.084,99.134,136.874)
N7: (26.683,100.970,134.477)
N9: (28.818,101.300,133.863)
O5': (27.399,102.630,130.481)
O3': (30.564,100.703,129.701)
Image (generated by PyMOL):