Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21738:21627
Extra
PDB:
ATOM 1 O3' A A1737 -53.089 -6.817 64.486 1.00 82.64 O
ATOM 2 P A A1738 -52.415 -8.271 64.362 0.55 81.07 P
ATOM 3 OP1 A A1738 -53.387 -9.239 64.956 0.55 81.72 O
ATOM 4 OP2 A A1738 -51.046 -8.182 64.945 0.55 80.52 O
ATOM 5 O5' A A1738 -52.327 -8.490 62.788 0.55 81.36 O
ATOM 6 C5' A A1738 -51.854 -9.703 62.240 0.55 81.80 C
ATOM 7 C4' A A1738 -50.931 -9.443 61.086 0.55 81.57 C
ATOM 8 O4' A A1738 -50.647 -8.021 61.004 0.55 80.90 O
ATOM 9 C3' A A1738 -49.565 -10.080 61.193 0.55 81.39 C
ATOM 10 O3' A A1738 -49.558 -11.425 60.805 0.55 82.03 O
ATOM 11 C2' A A1738 -48.707 -9.185 60.321 0.55 80.89 C
ATOM 12 O2' A A1738 -48.950 -9.440 58.942 0.55 81.31 O
ATOM 13 C1' A A1738 -49.285 -7.821 60.678 0.55 80.46 C
ATOM 14 N9 A A1738 -48.605 -7.254 61.857 0.55 79.84 N
ATOM 15 C8 A A1738 -49.034 -7.188 63.157 0.55 79.75 C
ATOM 16 N7 A A1738 -48.174 -6.650 63.976 0.55 79.18 N
ATOM 17 C5 A A1738 -47.101 -6.359 63.144 0.55 78.88 C
ATOM 18 C6 A A1738 -45.853 -5.776 63.386 0.55 78.28 C
ATOM 19 N6 A A1738 -45.476 -5.373 64.596 0.55 77.87 N
ATOM 20 N1 A A1738 -45.012 -5.623 62.340 0.55 78.15 N
ATOM 21 C2 A A1738 -45.398 -6.032 61.126 0.55 78.59 C
ATOM 22 N3 A A1738 -46.544 -6.603 60.766 0.55 79.17 N
ATOM 23 C4 A A1738 -47.350 -6.731 61.837 0.55 79.28 C
ATOM 24 P G A1739 -48.802 -12.489 61.714 1.00 88.28 P
ATOM 25 OP1 G A1739 -49.356 -13.831 61.374 1.00 89.13 O
ATOM 26 OP2 G A1739 -48.891 -12.015 63.120 1.00 87.89 O
ATOM 27 O5' G A1739 -47.291 -12.380 61.212 1.00 87.85 O
TER
ATOM 1 O3' C B1626 -33.970 -6.022 66.513 1.00 65.35 O
ATOM 2 P G B1627 -33.924 -4.669 65.676 1.00 64.49 P
ATOM 3 OP1 G B1627 -32.487 -4.371 65.433 1.00 64.17 O
ATOM 4 OP2 G B1627 -34.739 -3.683 66.396 1.00 64.25 O
ATOM 5 O5' G B1627 -34.647 -5.068 64.325 1.00 64.92 O
ATOM 6 C5' G B1627 -34.001 -5.902 63.400 1.00 65.19 C
ATOM 7 C4' G B1627 -34.878 -6.184 62.226 1.00 65.62 C
ATOM 8 O4' G B1627 -36.028 -6.952 62.648 1.00 66.06 O
ATOM 9 C3' G B1627 -35.488 -4.980 61.533 1.00 65.44 C
ATOM 10 O3' G B1627 -34.580 -4.312 60.679 1.00 65.17 O
ATOM 11 C2' G B1627 -36.642 -5.608 60.787 1.00 65.99 C
ATOM 12 O2' G B1627 -36.162 -6.273 59.632 1.00 66.30 O
ATOM 13 C1' G B1627 -37.115 -6.663 61.801 1.00 66.31 C
ATOM 14 N9 G B1627 -38.230 -6.169 62.629 1.00 66.25 N
ATOM 15 C8 G B1627 -38.167 -5.716 63.922 1.00 65.91 C
ATOM 16 N7 G B1627 -39.324 -5.328 64.383 1.00 65.97 N
ATOM 17 C5 G B1627 -40.209 -5.537 63.333 1.00 66.38 C
ATOM 18 C6 G B1627 -41.613 -5.321 63.242 1.00 66.65 C
ATOM 19 O6 G B1627 -42.377 -4.861 64.083 1.00 66.56 O
ATOM 20 N1 G B1627 -42.118 -5.670 62.012 1.00 67.07 N
ATOM 21 C2 G B1627 -41.362 -6.164 60.996 1.00 67.22 C
ATOM 22 N2 G B1627 -42.040 -6.411 59.886 1.00 67.65 N
ATOM 23 N3 G B1627 -40.065 -6.409 61.039 1.00 66.99 N
ATOM 24 C4 G B1627 -39.547 -6.059 62.238 1.00 66.57 C
ATOM 25 P C B1628 -34.862 -2.796 60.245 1.00 72.79 P
ATOM 26 OP1 C B1628 -33.620 -2.271 59.632 1.00 72.51 O
ATOM 27 OP2 C B1628 -35.421 -2.104 61.441 1.00 72.51 O
ATOM 28 O5' C B1628 -35.985 -2.949 59.137 1.00 73.24 O
TER
ATOM 2 P A A1738 -52.415 -8.271 64.362 0.55 81.07 P
ATOM 3 OP1 A A1738 -53.387 -9.239 64.956 0.55 81.72 O
ATOM 4 OP2 A A1738 -51.046 -8.182 64.945 0.55 80.52 O
ATOM 5 O5' A A1738 -52.327 -8.490 62.788 0.55 81.36 O
ATOM 6 C5' A A1738 -51.854 -9.703 62.240 0.55 81.80 C
ATOM 7 C4' A A1738 -50.931 -9.443 61.086 0.55 81.57 C
ATOM 8 O4' A A1738 -50.647 -8.021 61.004 0.55 80.90 O
ATOM 9 C3' A A1738 -49.565 -10.080 61.193 0.55 81.39 C
ATOM 10 O3' A A1738 -49.558 -11.425 60.805 0.55 82.03 O
ATOM 11 C2' A A1738 -48.707 -9.185 60.321 0.55 80.89 C
ATOM 12 O2' A A1738 -48.950 -9.440 58.942 0.55 81.31 O
ATOM 13 C1' A A1738 -49.285 -7.821 60.678 0.55 80.46 C
ATOM 14 N9 A A1738 -48.605 -7.254 61.857 0.55 79.84 N
ATOM 15 C8 A A1738 -49.034 -7.188 63.157 0.55 79.75 C
ATOM 16 N7 A A1738 -48.174 -6.650 63.976 0.55 79.18 N
ATOM 17 C5 A A1738 -47.101 -6.359 63.144 0.55 78.88 C
ATOM 18 C6 A A1738 -45.853 -5.776 63.386 0.55 78.28 C
ATOM 19 N6 A A1738 -45.476 -5.373 64.596 0.55 77.87 N
ATOM 20 N1 A A1738 -45.012 -5.623 62.340 0.55 78.15 N
ATOM 21 C2 A A1738 -45.398 -6.032 61.126 0.55 78.59 C
ATOM 22 N3 A A1738 -46.544 -6.603 60.766 0.55 79.17 N
ATOM 23 C4 A A1738 -47.350 -6.731 61.837 0.55 79.28 C
ATOM 24 P G A1739 -48.802 -12.489 61.714 1.00 88.28 P
ATOM 25 OP1 G A1739 -49.356 -13.831 61.374 1.00 89.13 O
ATOM 26 OP2 G A1739 -48.891 -12.015 63.120 1.00 87.89 O
ATOM 27 O5' G A1739 -47.291 -12.380 61.212 1.00 87.85 O
TER
ATOM 1 O3' C B1626 -33.970 -6.022 66.513 1.00 65.35 O
ATOM 2 P G B1627 -33.924 -4.669 65.676 1.00 64.49 P
ATOM 3 OP1 G B1627 -32.487 -4.371 65.433 1.00 64.17 O
ATOM 4 OP2 G B1627 -34.739 -3.683 66.396 1.00 64.25 O
ATOM 5 O5' G B1627 -34.647 -5.068 64.325 1.00 64.92 O
ATOM 6 C5' G B1627 -34.001 -5.902 63.400 1.00 65.19 C
ATOM 7 C4' G B1627 -34.878 -6.184 62.226 1.00 65.62 C
ATOM 8 O4' G B1627 -36.028 -6.952 62.648 1.00 66.06 O
ATOM 9 C3' G B1627 -35.488 -4.980 61.533 1.00 65.44 C
ATOM 10 O3' G B1627 -34.580 -4.312 60.679 1.00 65.17 O
ATOM 11 C2' G B1627 -36.642 -5.608 60.787 1.00 65.99 C
ATOM 12 O2' G B1627 -36.162 -6.273 59.632 1.00 66.30 O
ATOM 13 C1' G B1627 -37.115 -6.663 61.801 1.00 66.31 C
ATOM 14 N9 G B1627 -38.230 -6.169 62.629 1.00 66.25 N
ATOM 15 C8 G B1627 -38.167 -5.716 63.922 1.00 65.91 C
ATOM 16 N7 G B1627 -39.324 -5.328 64.383 1.00 65.97 N
ATOM 17 C5 G B1627 -40.209 -5.537 63.333 1.00 66.38 C
ATOM 18 C6 G B1627 -41.613 -5.321 63.242 1.00 66.65 C
ATOM 19 O6 G B1627 -42.377 -4.861 64.083 1.00 66.56 O
ATOM 20 N1 G B1627 -42.118 -5.670 62.012 1.00 67.07 N
ATOM 21 C2 G B1627 -41.362 -6.164 60.996 1.00 67.22 C
ATOM 22 N2 G B1627 -42.040 -6.411 59.886 1.00 67.65 N
ATOM 23 N3 G B1627 -40.065 -6.409 61.039 1.00 66.99 N
ATOM 24 C4 G B1627 -39.547 -6.059 62.238 1.00 66.57 C
ATOM 25 P C B1628 -34.862 -2.796 60.245 1.00 72.79 P
ATOM 26 OP1 C B1628 -33.620 -2.271 59.632 1.00 72.51 O
ATOM 27 OP2 C B1628 -35.421 -2.104 61.441 1.00 72.51 O
ATOM 28 O5' C B1628 -35.985 -2.949 59.137 1.00 73.24 O
TER
Atoms:
OP1: (-53.387,-9.239,64.956)
OP2: (-51.046,-8.182,64.945)
C3': (-49.565,-10.080,61.193)
C1': (-49.285,-7.821,60.678)
C5': (-51.854,-9.703,62.240)
O4': (-50.647,-8.021,61.004)
C8: (-49.034,-7.188,63.157)
O2': (-48.950,-9.440,58.942)
C6: (-45.853,-5.776,63.386)
C5: (-47.101,-6.359,63.144)
C4: (-47.350,-6.731,61.837)
P: (-52.415,-8.271,64.362)
C4': (-50.931,-9.443,61.086)
C2': (-48.707,-9.185,60.321)
C2: (-45.398,-6.032,61.126)
N1: (-45.012,-5.623,62.340)
N3: (-46.544,-6.603,60.766)
N6: (-45.476,-5.373,64.596)
N7: (-48.174,-6.650,63.976)
N9: (-48.605,-7.254,61.857)
O5': (-52.327,-8.490,62.788)
O3': (-49.558,-11.425,60.805)
OP2: (-51.046,-8.182,64.945)
C3': (-49.565,-10.080,61.193)
C1': (-49.285,-7.821,60.678)
C5': (-51.854,-9.703,62.240)
O4': (-50.647,-8.021,61.004)
C8: (-49.034,-7.188,63.157)
O2': (-48.950,-9.440,58.942)
C6: (-45.853,-5.776,63.386)
C5: (-47.101,-6.359,63.144)
C4: (-47.350,-6.731,61.837)
P: (-52.415,-8.271,64.362)
C4': (-50.931,-9.443,61.086)
C2': (-48.707,-9.185,60.321)
C2: (-45.398,-6.032,61.126)
N1: (-45.012,-5.623,62.340)
N3: (-46.544,-6.603,60.766)
N6: (-45.476,-5.373,64.596)
N7: (-48.174,-6.650,63.976)
N9: (-48.605,-7.254,61.857)
O5': (-52.327,-8.490,62.788)
O3': (-49.558,-11.425,60.805)
OP1: (-32.487,-4.371,65.433)
OP2: (-34.739,-3.683,66.396)
C3': (-35.488,-4.980,61.533)
C1': (-37.115,-6.663,61.801)
C5': (-34.001,-5.902,63.400)
O6: (-42.377,-4.861,64.083)
O4': (-36.028,-6.952,62.648)
C8: (-38.167,-5.716,63.922)
C2: (-41.362,-6.164,60.996)
C6: (-41.613,-5.321,63.242)
C5: (-40.209,-5.537,63.333)
C4: (-39.547,-6.059,62.238)
P: (-33.924,-4.669,65.676)
C4': (-34.878,-6.184,62.226)
C2': (-36.642,-5.608,60.787)
O2': (-36.162,-6.273,59.632)
N1: (-42.118,-5.670,62.012)
N2: (-42.040,-6.411,59.886)
N3: (-40.065,-6.409,61.039)
N7: (-39.324,-5.328,64.383)
N9: (-38.230,-6.169,62.629)
O5': (-34.647,-5.068,64.325)
O3': (-34.580,-4.312,60.679)
OP2: (-34.739,-3.683,66.396)
C3': (-35.488,-4.980,61.533)
C1': (-37.115,-6.663,61.801)
C5': (-34.001,-5.902,63.400)
O6: (-42.377,-4.861,64.083)
O4': (-36.028,-6.952,62.648)
C8: (-38.167,-5.716,63.922)
C2: (-41.362,-6.164,60.996)
C6: (-41.613,-5.321,63.242)
C5: (-40.209,-5.537,63.333)
C4: (-39.547,-6.059,62.238)
P: (-33.924,-4.669,65.676)
C4': (-34.878,-6.184,62.226)
C2': (-36.642,-5.608,60.787)
O2': (-36.162,-6.273,59.632)
N1: (-42.118,-5.670,62.012)
N2: (-42.040,-6.411,59.886)
N3: (-40.065,-6.409,61.039)
N7: (-39.324,-5.328,64.383)
N9: (-38.230,-6.169,62.629)
O5': (-34.647,-5.068,64.325)
O3': (-34.580,-4.312,60.679)
Image (generated by PyMOL):