Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:Z28:Z41
Extra
PDB:
ATOM 1 O3' G A 27 17.531 -71.260 -70.970 1.00 66.44 O
ATOM 2 P A A 28 17.243 -72.841 -70.922 1.00 61.35 P
ATOM 3 OP1 A A 28 18.422 -73.483 -70.276 1.00 65.68 O
ATOM 4 OP2 A A 28 16.857 -73.266 -72.298 1.00 61.32 O
ATOM 5 O5' A A 28 15.981 -72.932 -69.958 1.00 61.64 O
ATOM 6 C5' A A 28 15.885 -72.115 -68.802 1.00 63.00 C
ATOM 7 C4' A A 28 14.544 -72.264 -68.135 1.00 66.06 C
ATOM 8 O4' A A 28 13.513 -71.655 -68.957 1.00 63.86 O
ATOM 9 C3' A A 28 14.055 -73.688 -67.938 1.00 72.13 C
ATOM 10 O3' A A 28 14.650 -74.330 -66.827 1.00 75.88 O
ATOM 11 C2' A A 28 12.552 -73.500 -67.804 1.00 71.48 C
ATOM 12 O2' A A 28 12.220 -73.026 -66.506 1.00 71.28 O
ATOM 13 C1' A A 28 12.303 -72.372 -68.811 1.00 66.84 C
ATOM 14 N9 A A 28 11.894 -72.892 -70.132 1.00 68.64 N
ATOM 15 C8 A A 28 12.602 -72.907 -71.310 1.00 67.19 C
ATOM 16 N7 A A 28 11.953 -73.457 -72.313 1.00 70.00 N
ATOM 17 C5 A A 28 10.735 -73.830 -71.758 1.00 73.08 C
ATOM 18 C6 A A 28 9.604 -74.460 -72.297 1.00 76.49 C
ATOM 19 N6 A A 28 9.497 -74.841 -73.569 1.00 75.05 N
ATOM 20 N1 A A 28 8.566 -74.686 -71.469 1.00 80.39 N
ATOM 21 C2 A A 28 8.664 -74.304 -70.189 1.00 76.84 C
ATOM 22 N3 A A 28 9.667 -73.704 -69.565 1.00 73.23 N
ATOM 23 C4 A A 28 10.684 -73.489 -70.417 1.00 72.28 C
ATOM 24 P C A 29 14.880 -75.923 -66.839 1.00 72.21 P
ATOM 25 OP1 C A 29 15.475 -76.284 -65.524 1.00 70.42 O
ATOM 26 OP2 C A 29 15.633 -76.253 -68.078 1.00 64.66 O
ATOM 27 O5' C A 29 13.400 -76.496 -66.941 1.00 73.19 O
TER
ATOM 1 O3' G B 40 2.080 -82.287 -77.472 1.00113.13 O
ATOM 2 P G B 41 1.169 -81.054 -77.950 1.00109.07 P
ATOM 3 OP1 G B 41 -0.049 -81.627 -78.579 1.00124.42 O
ATOM 4 OP2 G B 41 2.034 -80.162 -78.757 1.00105.18 O
ATOM 5 O5' G B 41 0.789 -80.349 -76.575 1.00109.21 O
ATOM 6 C5' G B 41 0.194 -81.090 -75.520 1.00113.02 C
ATOM 7 C4' G B 41 0.348 -80.389 -74.196 1.00111.62 C
ATOM 8 O4' G B 41 1.749 -80.306 -73.846 1.00104.49 O
ATOM 9 C3' G B 41 -0.145 -78.951 -74.143 1.00104.93 C
ATOM 10 O3' G B 41 -1.542 -78.870 -73.914 1.00112.68 O
ATOM 11 C2' G B 41 0.686 -78.338 -73.019 1.00 96.51 C
ATOM 12 O2' G B 41 0.091 -78.602 -71.755 1.00 98.51 O
ATOM 13 C1' G B 41 1.997 -79.128 -73.114 1.00 98.16 C
ATOM 14 N9 G B 41 3.077 -78.372 -73.784 1.00 92.29 N
ATOM 15 C8 G B 41 3.271 -78.199 -75.136 1.00 90.02 C
ATOM 16 N7 G B 41 4.338 -77.499 -75.423 1.00 81.12 N
ATOM 17 C5 G B 41 4.897 -77.201 -74.186 1.00 78.13 C
ATOM 18 C6 G B 41 6.069 -76.466 -73.857 1.00 70.96 C
ATOM 19 O6 G B 41 6.878 -75.911 -74.623 1.00 63.69 O
ATOM 20 N1 G B 41 6.260 -76.405 -72.479 1.00 71.16 N
ATOM 21 C2 G B 41 5.438 -76.975 -71.541 1.00 75.19 C
ATOM 22 N2 G B 41 5.790 -76.808 -70.258 1.00 73.61 N
ATOM 23 N3 G B 41 4.348 -77.663 -71.835 1.00 81.95 N
ATOM 24 C4 G B 41 4.136 -77.738 -73.167 1.00 84.24 C
ATOM 25 P A B 42 -2.424 -77.742 -74.637 1.00125.90 P
ATOM 26 OP1 A B 42 -1.943 -76.430 -74.146 1.00106.93 O
ATOM 27 OP2 A B 42 -3.847 -78.104 -74.430 1.00117.19 O
ATOM 28 O5' A B 42 -2.040 -77.921 -76.166 1.00124.47 O
TER
ATOM 2 P A A 28 17.243 -72.841 -70.922 1.00 61.35 P
ATOM 3 OP1 A A 28 18.422 -73.483 -70.276 1.00 65.68 O
ATOM 4 OP2 A A 28 16.857 -73.266 -72.298 1.00 61.32 O
ATOM 5 O5' A A 28 15.981 -72.932 -69.958 1.00 61.64 O
ATOM 6 C5' A A 28 15.885 -72.115 -68.802 1.00 63.00 C
ATOM 7 C4' A A 28 14.544 -72.264 -68.135 1.00 66.06 C
ATOM 8 O4' A A 28 13.513 -71.655 -68.957 1.00 63.86 O
ATOM 9 C3' A A 28 14.055 -73.688 -67.938 1.00 72.13 C
ATOM 10 O3' A A 28 14.650 -74.330 -66.827 1.00 75.88 O
ATOM 11 C2' A A 28 12.552 -73.500 -67.804 1.00 71.48 C
ATOM 12 O2' A A 28 12.220 -73.026 -66.506 1.00 71.28 O
ATOM 13 C1' A A 28 12.303 -72.372 -68.811 1.00 66.84 C
ATOM 14 N9 A A 28 11.894 -72.892 -70.132 1.00 68.64 N
ATOM 15 C8 A A 28 12.602 -72.907 -71.310 1.00 67.19 C
ATOM 16 N7 A A 28 11.953 -73.457 -72.313 1.00 70.00 N
ATOM 17 C5 A A 28 10.735 -73.830 -71.758 1.00 73.08 C
ATOM 18 C6 A A 28 9.604 -74.460 -72.297 1.00 76.49 C
ATOM 19 N6 A A 28 9.497 -74.841 -73.569 1.00 75.05 N
ATOM 20 N1 A A 28 8.566 -74.686 -71.469 1.00 80.39 N
ATOM 21 C2 A A 28 8.664 -74.304 -70.189 1.00 76.84 C
ATOM 22 N3 A A 28 9.667 -73.704 -69.565 1.00 73.23 N
ATOM 23 C4 A A 28 10.684 -73.489 -70.417 1.00 72.28 C
ATOM 24 P C A 29 14.880 -75.923 -66.839 1.00 72.21 P
ATOM 25 OP1 C A 29 15.475 -76.284 -65.524 1.00 70.42 O
ATOM 26 OP2 C A 29 15.633 -76.253 -68.078 1.00 64.66 O
ATOM 27 O5' C A 29 13.400 -76.496 -66.941 1.00 73.19 O
TER
ATOM 1 O3' G B 40 2.080 -82.287 -77.472 1.00113.13 O
ATOM 2 P G B 41 1.169 -81.054 -77.950 1.00109.07 P
ATOM 3 OP1 G B 41 -0.049 -81.627 -78.579 1.00124.42 O
ATOM 4 OP2 G B 41 2.034 -80.162 -78.757 1.00105.18 O
ATOM 5 O5' G B 41 0.789 -80.349 -76.575 1.00109.21 O
ATOM 6 C5' G B 41 0.194 -81.090 -75.520 1.00113.02 C
ATOM 7 C4' G B 41 0.348 -80.389 -74.196 1.00111.62 C
ATOM 8 O4' G B 41 1.749 -80.306 -73.846 1.00104.49 O
ATOM 9 C3' G B 41 -0.145 -78.951 -74.143 1.00104.93 C
ATOM 10 O3' G B 41 -1.542 -78.870 -73.914 1.00112.68 O
ATOM 11 C2' G B 41 0.686 -78.338 -73.019 1.00 96.51 C
ATOM 12 O2' G B 41 0.091 -78.602 -71.755 1.00 98.51 O
ATOM 13 C1' G B 41 1.997 -79.128 -73.114 1.00 98.16 C
ATOM 14 N9 G B 41 3.077 -78.372 -73.784 1.00 92.29 N
ATOM 15 C8 G B 41 3.271 -78.199 -75.136 1.00 90.02 C
ATOM 16 N7 G B 41 4.338 -77.499 -75.423 1.00 81.12 N
ATOM 17 C5 G B 41 4.897 -77.201 -74.186 1.00 78.13 C
ATOM 18 C6 G B 41 6.069 -76.466 -73.857 1.00 70.96 C
ATOM 19 O6 G B 41 6.878 -75.911 -74.623 1.00 63.69 O
ATOM 20 N1 G B 41 6.260 -76.405 -72.479 1.00 71.16 N
ATOM 21 C2 G B 41 5.438 -76.975 -71.541 1.00 75.19 C
ATOM 22 N2 G B 41 5.790 -76.808 -70.258 1.00 73.61 N
ATOM 23 N3 G B 41 4.348 -77.663 -71.835 1.00 81.95 N
ATOM 24 C4 G B 41 4.136 -77.738 -73.167 1.00 84.24 C
ATOM 25 P A B 42 -2.424 -77.742 -74.637 1.00125.90 P
ATOM 26 OP1 A B 42 -1.943 -76.430 -74.146 1.00106.93 O
ATOM 27 OP2 A B 42 -3.847 -78.104 -74.430 1.00117.19 O
ATOM 28 O5' A B 42 -2.040 -77.921 -76.166 1.00124.47 O
TER
Atoms:
OP1: (18.422,-73.483,-70.276)
OP2: (16.857,-73.266,-72.298)
C3': (14.055,-73.688,-67.938)
C1': (12.303,-72.372,-68.811)
C5': (15.885,-72.115,-68.802)
O4': (13.513,-71.655,-68.957)
C8: (12.602,-72.907,-71.310)
O2': (12.220,-73.026,-66.506)
C6: (9.604,-74.460,-72.297)
C5: (10.735,-73.830,-71.758)
C4: (10.684,-73.489,-70.417)
P: (17.243,-72.841,-70.922)
C4': (14.544,-72.264,-68.135)
C2': (12.552,-73.500,-67.804)
C2: (8.664,-74.304,-70.189)
N1: (8.566,-74.686,-71.469)
N3: (9.667,-73.704,-69.565)
N6: (9.497,-74.841,-73.569)
N7: (11.953,-73.457,-72.313)
N9: (11.894,-72.892,-70.132)
O5': (15.981,-72.932,-69.958)
O3': (14.650,-74.330,-66.827)
OP2: (16.857,-73.266,-72.298)
C3': (14.055,-73.688,-67.938)
C1': (12.303,-72.372,-68.811)
C5': (15.885,-72.115,-68.802)
O4': (13.513,-71.655,-68.957)
C8: (12.602,-72.907,-71.310)
O2': (12.220,-73.026,-66.506)
C6: (9.604,-74.460,-72.297)
C5: (10.735,-73.830,-71.758)
C4: (10.684,-73.489,-70.417)
P: (17.243,-72.841,-70.922)
C4': (14.544,-72.264,-68.135)
C2': (12.552,-73.500,-67.804)
C2: (8.664,-74.304,-70.189)
N1: (8.566,-74.686,-71.469)
N3: (9.667,-73.704,-69.565)
N6: (9.497,-74.841,-73.569)
N7: (11.953,-73.457,-72.313)
N9: (11.894,-72.892,-70.132)
O5': (15.981,-72.932,-69.958)
O3': (14.650,-74.330,-66.827)
OP1: (-0.049,-81.627,-78.579)
OP2: (2.034,-80.162,-78.757)
C3': (-0.145,-78.951,-74.143)
C1': (1.997,-79.128,-73.114)
C5': (0.194,-81.090,-75.520)
O6: (6.878,-75.911,-74.623)
O4': (1.749,-80.306,-73.846)
C8: (3.271,-78.199,-75.136)
C2: (5.438,-76.975,-71.541)
C6: (6.069,-76.466,-73.857)
C5: (4.897,-77.201,-74.186)
C4: (4.136,-77.738,-73.167)
P: (1.169,-81.054,-77.950)
C4': (0.348,-80.389,-74.196)
C2': (0.686,-78.338,-73.019)
O2': (0.091,-78.602,-71.755)
N1: (6.260,-76.405,-72.479)
N2: (5.790,-76.808,-70.258)
N3: (4.348,-77.663,-71.835)
N7: (4.338,-77.499,-75.423)
N9: (3.077,-78.372,-73.784)
O5': (0.789,-80.349,-76.575)
O3': (-1.542,-78.870,-73.914)
OP2: (2.034,-80.162,-78.757)
C3': (-0.145,-78.951,-74.143)
C1': (1.997,-79.128,-73.114)
C5': (0.194,-81.090,-75.520)
O6: (6.878,-75.911,-74.623)
O4': (1.749,-80.306,-73.846)
C8: (3.271,-78.199,-75.136)
C2: (5.438,-76.975,-71.541)
C6: (6.069,-76.466,-73.857)
C5: (4.897,-77.201,-74.186)
C4: (4.136,-77.738,-73.167)
P: (1.169,-81.054,-77.950)
C4': (0.348,-80.389,-74.196)
C2': (0.686,-78.338,-73.019)
O2': (0.091,-78.602,-71.755)
N1: (6.260,-76.405,-72.479)
N2: (5.790,-76.808,-70.258)
N3: (4.348,-77.663,-71.835)
N7: (4.338,-77.499,-75.423)
N9: (3.077,-78.372,-73.784)
O5': (0.789,-80.349,-76.575)
O3': (-1.542,-78.870,-73.914)
Image (generated by PyMOL):