ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2BCZ:C11:D5

Extra

PDB:
ATOM 1 O3' C A 10 43.088 14.598 45.571 1.00 58.20 O
ATOM 2 P A A 11 43.637 13.087 45.594 1.00 62.46 P
ATOM 3 OP1 A A 11 45.050 13.227 46.069 1.00 59.02 O
ATOM 4 OP2 A A 11 43.338 12.456 44.274 1.00 56.63 O
ATOM 5 O5' A A 11 42.796 12.336 46.718 1.00 54.63 O
ATOM 6 C5' A A 11 43.082 12.589 48.078 1.00 52.61 C
ATOM 7 C4' A A 11 41.985 12.035 48.944 1.00 56.09 C
ATOM 8 O4' A A 11 40.704 12.517 48.460 1.00 53.70 O
ATOM 9 C3' A A 11 41.840 10.542 48.859 1.00 57.30 C
ATOM 10 O3' A A 11 42.763 9.897 49.702 1.00 63.36 O
ATOM 11 C2' A A 11 40.403 10.324 49.284 1.00 56.50 C
ATOM 12 O2' A A 11 40.230 10.361 50.689 1.00 53.76 O
ATOM 13 C1' A A 11 39.728 11.518 48.619 1.00 52.59 C
ATOM 14 N9 A A 11 39.245 11.184 47.292 1.00 52.94 N
ATOM 15 C8 A A 11 39.747 11.585 46.070 1.00 52.34 C
ATOM 16 N7 A A 11 39.039 11.149 45.044 1.00 52.20 N
ATOM 17 C5 A A 11 38.023 10.400 45.632 1.00 51.46 C
ATOM 18 C6 A A 11 36.940 9.680 45.087 1.00 53.23 C
ATOM 19 N6 A A 11 36.717 9.566 43.773 1.00 53.91 N
ATOM 20 N1 A A 11 36.088 9.067 45.950 1.00 53.06 N
ATOM 21 C2 A A 11 36.345 9.156 47.274 1.00 52.71 C
ATOM 22 N3 A A 11 37.347 9.785 47.904 1.00 50.77 N
ATOM 23 C4 A A 11 38.148 10.402 47.015 1.00 51.96 C
ATOM 24 P C A 12 43.383 8.488 49.233 1.00 67.45 P
ATOM 25 OP1 C A 12 44.320 8.120 50.334 1.00 61.31 O
ATOM 26 OP2 C A 12 43.905 8.686 47.841 1.00 63.64 O
ATOM 27 O5' C A 12 42.118 7.499 49.191 1.00 56.31 O
TER

ATOM 1 O3' G B 4 29.142 3.357 39.705 1.00 71.31 O
ATOM 2 P G B 5 28.076 4.491 40.095 1.00 71.03 P
ATOM 3 OP1 G B 5 26.756 4.127 39.501 1.00 67.11 O
ATOM 4 OP2 G B 5 28.714 5.771 39.705 1.00 73.28 O
ATOM 5 O5' G B 5 28.006 4.416 41.692 1.00 69.52 O
ATOM 6 C5' G B 5 28.142 3.169 42.374 1.00 70.23 C
ATOM 7 C4' G B 5 28.398 3.396 43.851 1.00 73.98 C
ATOM 8 O4' G B 5 29.696 3.986 44.059 1.00 72.82 O
ATOM 9 C3' G B 5 27.393 4.343 44.484 1.00 74.96 C
ATOM 10 O3' G B 5 27.131 3.833 45.800 1.00 79.08 O
ATOM 11 C2' G B 5 28.071 5.712 44.431 1.00 74.26 C
ATOM 12 O2' G B 5 27.790 6.542 45.531 1.00 78.11 O
ATOM 13 C1' G B 5 29.552 5.316 44.489 1.00 71.44 C
ATOM 14 N9 G B 5 30.555 6.138 43.824 1.00 66.14 N
ATOM 15 C8 G B 5 30.504 6.698 42.568 1.00 65.39 C
ATOM 16 N7 G B 5 31.587 7.369 42.264 1.00 65.13 N
ATOM 17 C5 G B 5 32.398 7.244 43.392 1.00 64.27 C
ATOM 18 C6 G B 5 33.708 7.755 43.655 1.00 63.89 C
ATOM 19 O6 G B 5 34.426 8.449 42.915 1.00 65.30 O
ATOM 20 N1 G B 5 34.161 7.384 44.923 1.00 61.91 N
ATOM 21 C2 G B 5 33.442 6.624 45.826 1.00 62.42 C
ATOM 22 N2 G B 5 34.034 6.374 47.022 1.00 59.91 N
ATOM 23 N3 G B 5 32.225 6.144 45.584 1.00 61.87 N
ATOM 24 C4 G B 5 31.772 6.491 44.362 1.00 63.61 C
ATOM 25 P U B 6 25.694 4.039 46.497 1.00 82.67 P
ATOM 26 OP1 U B 6 25.527 3.036 47.585 1.00 80.82 O
ATOM 27 OP2 U B 6 24.627 4.213 45.456 1.00 81.16 O
ATOM 28 O5' U B 6 25.841 5.416 47.260 1.00 84.06 O
TER

Atoms:
OP1: (45.050,13.227,46.069)
OP2: (43.338,12.456,44.274)
C3': (41.840,10.542,48.859)
C1': (39.728,11.518,48.619)
C5': (43.082,12.589,48.078)
O4': (40.704,12.517,48.460)
C8: (39.747,11.585,46.070)
O2': (40.230,10.361,50.689)
C6: (36.940,9.680,45.087)
C5: (38.023,10.400,45.632)
C4: (38.148,10.402,47.015)
P: (43.637,13.087,45.594)
C4': (41.985,12.035,48.944)
C2': (40.403,10.324,49.284)
C2: (36.345,9.156,47.274)
N1: (36.088,9.067,45.950)
N3: (37.347,9.785,47.904)
N6: (36.717,9.566,43.773)
N7: (39.039,11.149,45.044)
N9: (39.245,11.184,47.292)
O5': (42.796,12.336,46.718)
O3': (42.763,9.897,49.702)
OP1: (26.756,4.127,39.501)
OP2: (28.714,5.771,39.705)
C3': (27.393,4.343,44.484)
C1': (29.552,5.316,44.489)
C5': (28.142,3.169,42.374)
O6: (34.426,8.449,42.915)
O4': (29.696,3.986,44.059)
C8: (30.504,6.698,42.568)
C2: (33.442,6.624,45.826)
C6: (33.708,7.755,43.655)
C5: (32.398,7.244,43.392)
C4: (31.772,6.491,44.362)
P: (28.076,4.491,40.095)
C4': (28.398,3.396,43.851)
C2': (28.071,5.712,44.431)
O2': (27.790,6.542,45.531)
N1: (34.161,7.384,44.923)
N2: (34.034,6.374,47.022)
N3: (32.225,6.144,45.584)
N7: (31.587,7.369,42.264)
N9: (30.555,6.138,43.824)
O5': (28.006,4.416,41.692)
O3': (27.131,3.833,45.800)
Image (generated by PyMOL):
PyMOL image
show in jmol