Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2NPY:C11:D5
Extra
PDB:
ATOM 1 O3' C A 10 43.543 14.057 46.262 1.00 67.55 O
ATOM 2 P A A 11 44.024 12.524 46.249 1.00 65.95 P
ATOM 3 OP1 A A 11 45.472 12.519 46.582 1.00 68.89 O
ATOM 4 OP2 A A 11 43.546 11.882 44.993 1.00 67.08 O
ATOM 5 O5' A A 11 43.239 11.859 47.462 1.00 66.45 O
ATOM 6 C5' A A 11 43.610 12.128 48.807 1.00 64.94 C
ATOM 7 C4' A A 11 42.625 11.487 49.744 1.00 63.71 C
ATOM 8 O4' A A 11 41.304 11.956 49.379 1.00 61.52 O
ATOM 9 C3' A A 11 42.501 9.979 49.625 1.00 67.37 C
ATOM 10 O3' A A 11 43.469 9.263 50.371 1.00 69.97 O
ATOM 11 C2' A A 11 41.101 9.731 50.157 1.00 65.66 C
ATOM 12 O2' A A 11 41.064 9.826 51.566 1.00 66.66 O
ATOM 13 C1' A A 11 40.356 10.915 49.555 1.00 60.75 C
ATOM 14 N9 A A 11 39.749 10.627 48.251 1.00 57.68 N
ATOM 15 C8 A A 11 40.182 11.051 47.016 1.00 57.45 C
ATOM 16 N7 A A 11 39.393 10.702 46.027 1.00 55.75 N
ATOM 17 C5 A A 11 38.380 9.989 46.649 1.00 55.11 C
ATOM 18 C6 A A 11 37.225 9.372 46.149 1.00 54.91 C
ATOM 19 N6 A A 11 36.883 9.386 44.851 1.00 54.69 N
ATOM 20 N1 A A 11 36.421 8.736 47.032 1.00 54.70 N
ATOM 21 C2 A A 11 36.768 8.731 48.331 1.00 55.85 C
ATOM 22 N3 A A 11 37.826 9.283 48.924 1.00 56.31 N
ATOM 23 C4 A A 11 38.599 9.908 48.017 1.00 56.09 C
ATOM 24 P C A 12 43.994 7.848 49.814 1.00 67.89 P
ATOM 25 OP1 C A 12 45.087 7.402 50.712 1.00 71.84 O
ATOM 26 OP2 C A 12 44.253 8.024 48.360 1.00 69.77 O
ATOM 27 O5' C A 12 42.740 6.865 49.938 1.00 68.02 O
TER
ATOM 1 O3' G B 4 29.107 2.966 41.106 1.00 75.39 O
ATOM 2 P G B 5 28.036 4.092 41.526 1.00 77.13 P
ATOM 3 OP1 G B 5 26.692 3.657 41.066 1.00 77.03 O
ATOM 4 OP2 G B 5 28.586 5.391 41.054 1.00 77.73 O
ATOM 5 O5' G B 5 28.046 4.049 43.123 1.00 77.23 O
ATOM 6 C5' G B 5 28.052 2.800 43.810 1.00 75.05 C
ATOM 7 C4' G B 5 28.494 2.981 45.243 1.00 76.19 C
ATOM 8 O4' G B 5 29.796 3.604 45.280 1.00 73.97 O
ATOM 9 C3' G B 5 27.560 3.893 46.033 1.00 75.64 C
ATOM 10 O3' G B 5 27.463 3.320 47.347 1.00 78.69 O
ATOM 11 C2' G B 5 28.214 5.277 45.964 1.00 73.16 C
ATOM 12 O2' G B 5 28.080 6.062 47.127 1.00 77.48 O
ATOM 13 C1' G B 5 29.688 4.896 45.820 1.00 69.16 C
ATOM 14 N9 G B 5 30.558 5.833 45.121 1.00 63.03 N
ATOM 15 C8 G B 5 30.362 6.364 43.875 1.00 62.39 C
ATOM 16 N7 G B 5 31.375 7.076 43.459 1.00 62.29 N
ATOM 17 C5 G B 5 32.292 7.012 44.501 1.00 60.03 C
ATOM 18 C6 G B 5 33.586 7.591 44.630 1.00 60.20 C
ATOM 19 O6 G B 5 34.201 8.302 43.813 1.00 59.19 O
ATOM 20 N1 G B 5 34.169 7.274 45.857 1.00 59.41 N
ATOM 21 C2 G B 5 33.585 6.506 46.835 1.00 58.63 C
ATOM 22 N2 G B 5 34.306 6.326 47.957 1.00 58.40 N
ATOM 23 N3 G B 5 32.382 5.957 46.723 1.00 58.24 N
ATOM 24 C4 G B 5 31.799 6.253 45.538 1.00 59.92 C
ATOM 25 P U B 6 26.119 3.430 48.221 1.00 81.18 P
ATOM 26 OP1 U B 6 26.243 2.404 49.296 1.00 78.98 O
ATOM 27 OP2 U B 6 24.943 3.409 47.308 1.00 78.05 O
ATOM 28 O5' U B 6 26.227 4.835 48.967 1.00 83.12 O
TER
ATOM 2 P A A 11 44.024 12.524 46.249 1.00 65.95 P
ATOM 3 OP1 A A 11 45.472 12.519 46.582 1.00 68.89 O
ATOM 4 OP2 A A 11 43.546 11.882 44.993 1.00 67.08 O
ATOM 5 O5' A A 11 43.239 11.859 47.462 1.00 66.45 O
ATOM 6 C5' A A 11 43.610 12.128 48.807 1.00 64.94 C
ATOM 7 C4' A A 11 42.625 11.487 49.744 1.00 63.71 C
ATOM 8 O4' A A 11 41.304 11.956 49.379 1.00 61.52 O
ATOM 9 C3' A A 11 42.501 9.979 49.625 1.00 67.37 C
ATOM 10 O3' A A 11 43.469 9.263 50.371 1.00 69.97 O
ATOM 11 C2' A A 11 41.101 9.731 50.157 1.00 65.66 C
ATOM 12 O2' A A 11 41.064 9.826 51.566 1.00 66.66 O
ATOM 13 C1' A A 11 40.356 10.915 49.555 1.00 60.75 C
ATOM 14 N9 A A 11 39.749 10.627 48.251 1.00 57.68 N
ATOM 15 C8 A A 11 40.182 11.051 47.016 1.00 57.45 C
ATOM 16 N7 A A 11 39.393 10.702 46.027 1.00 55.75 N
ATOM 17 C5 A A 11 38.380 9.989 46.649 1.00 55.11 C
ATOM 18 C6 A A 11 37.225 9.372 46.149 1.00 54.91 C
ATOM 19 N6 A A 11 36.883 9.386 44.851 1.00 54.69 N
ATOM 20 N1 A A 11 36.421 8.736 47.032 1.00 54.70 N
ATOM 21 C2 A A 11 36.768 8.731 48.331 1.00 55.85 C
ATOM 22 N3 A A 11 37.826 9.283 48.924 1.00 56.31 N
ATOM 23 C4 A A 11 38.599 9.908 48.017 1.00 56.09 C
ATOM 24 P C A 12 43.994 7.848 49.814 1.00 67.89 P
ATOM 25 OP1 C A 12 45.087 7.402 50.712 1.00 71.84 O
ATOM 26 OP2 C A 12 44.253 8.024 48.360 1.00 69.77 O
ATOM 27 O5' C A 12 42.740 6.865 49.938 1.00 68.02 O
TER
ATOM 1 O3' G B 4 29.107 2.966 41.106 1.00 75.39 O
ATOM 2 P G B 5 28.036 4.092 41.526 1.00 77.13 P
ATOM 3 OP1 G B 5 26.692 3.657 41.066 1.00 77.03 O
ATOM 4 OP2 G B 5 28.586 5.391 41.054 1.00 77.73 O
ATOM 5 O5' G B 5 28.046 4.049 43.123 1.00 77.23 O
ATOM 6 C5' G B 5 28.052 2.800 43.810 1.00 75.05 C
ATOM 7 C4' G B 5 28.494 2.981 45.243 1.00 76.19 C
ATOM 8 O4' G B 5 29.796 3.604 45.280 1.00 73.97 O
ATOM 9 C3' G B 5 27.560 3.893 46.033 1.00 75.64 C
ATOM 10 O3' G B 5 27.463 3.320 47.347 1.00 78.69 O
ATOM 11 C2' G B 5 28.214 5.277 45.964 1.00 73.16 C
ATOM 12 O2' G B 5 28.080 6.062 47.127 1.00 77.48 O
ATOM 13 C1' G B 5 29.688 4.896 45.820 1.00 69.16 C
ATOM 14 N9 G B 5 30.558 5.833 45.121 1.00 63.03 N
ATOM 15 C8 G B 5 30.362 6.364 43.875 1.00 62.39 C
ATOM 16 N7 G B 5 31.375 7.076 43.459 1.00 62.29 N
ATOM 17 C5 G B 5 32.292 7.012 44.501 1.00 60.03 C
ATOM 18 C6 G B 5 33.586 7.591 44.630 1.00 60.20 C
ATOM 19 O6 G B 5 34.201 8.302 43.813 1.00 59.19 O
ATOM 20 N1 G B 5 34.169 7.274 45.857 1.00 59.41 N
ATOM 21 C2 G B 5 33.585 6.506 46.835 1.00 58.63 C
ATOM 22 N2 G B 5 34.306 6.326 47.957 1.00 58.40 N
ATOM 23 N3 G B 5 32.382 5.957 46.723 1.00 58.24 N
ATOM 24 C4 G B 5 31.799 6.253 45.538 1.00 59.92 C
ATOM 25 P U B 6 26.119 3.430 48.221 1.00 81.18 P
ATOM 26 OP1 U B 6 26.243 2.404 49.296 1.00 78.98 O
ATOM 27 OP2 U B 6 24.943 3.409 47.308 1.00 78.05 O
ATOM 28 O5' U B 6 26.227 4.835 48.967 1.00 83.12 O
TER
Atoms:
OP1: (45.472,12.519,46.582)
OP2: (43.546,11.882,44.993)
C3': (42.501,9.979,49.625)
C1': (40.356,10.915,49.555)
C5': (43.610,12.128,48.807)
O4': (41.304,11.956,49.379)
C8: (40.182,11.051,47.016)
O2': (41.064,9.826,51.566)
C6: (37.225,9.372,46.149)
C5: (38.380,9.989,46.649)
C4: (38.599,9.908,48.017)
P: (44.024,12.524,46.249)
C4': (42.625,11.487,49.744)
C2': (41.101,9.731,50.157)
C2: (36.768,8.731,48.331)
N1: (36.421,8.736,47.032)
N3: (37.826,9.283,48.924)
N6: (36.883,9.386,44.851)
N7: (39.393,10.702,46.027)
N9: (39.749,10.627,48.251)
O5': (43.239,11.859,47.462)
O3': (43.469,9.263,50.371)
OP2: (43.546,11.882,44.993)
C3': (42.501,9.979,49.625)
C1': (40.356,10.915,49.555)
C5': (43.610,12.128,48.807)
O4': (41.304,11.956,49.379)
C8: (40.182,11.051,47.016)
O2': (41.064,9.826,51.566)
C6: (37.225,9.372,46.149)
C5: (38.380,9.989,46.649)
C4: (38.599,9.908,48.017)
P: (44.024,12.524,46.249)
C4': (42.625,11.487,49.744)
C2': (41.101,9.731,50.157)
C2: (36.768,8.731,48.331)
N1: (36.421,8.736,47.032)
N3: (37.826,9.283,48.924)
N6: (36.883,9.386,44.851)
N7: (39.393,10.702,46.027)
N9: (39.749,10.627,48.251)
O5': (43.239,11.859,47.462)
O3': (43.469,9.263,50.371)
OP1: (26.692,3.657,41.066)
OP2: (28.586,5.391,41.054)
C3': (27.560,3.893,46.033)
C1': (29.688,4.896,45.820)
C5': (28.052,2.800,43.810)
O6: (34.201,8.302,43.813)
O4': (29.796,3.604,45.280)
C8: (30.362,6.364,43.875)
C2: (33.585,6.506,46.835)
C6: (33.586,7.591,44.630)
C5: (32.292,7.012,44.501)
C4: (31.799,6.253,45.538)
P: (28.036,4.092,41.526)
C4': (28.494,2.981,45.243)
C2': (28.214,5.277,45.964)
O2': (28.080,6.062,47.127)
N1: (34.169,7.274,45.857)
N2: (34.306,6.326,47.957)
N3: (32.382,5.957,46.723)
N7: (31.375,7.076,43.459)
N9: (30.558,5.833,45.121)
O5': (28.046,4.049,43.123)
O3': (27.463,3.320,47.347)
OP2: (28.586,5.391,41.054)
C3': (27.560,3.893,46.033)
C1': (29.688,4.896,45.820)
C5': (28.052,2.800,43.810)
O6: (34.201,8.302,43.813)
O4': (29.796,3.604,45.280)
C8: (30.362,6.364,43.875)
C2: (33.585,6.506,46.835)
C6: (33.586,7.591,44.630)
C5: (32.292,7.012,44.501)
C4: (31.799,6.253,45.538)
P: (28.036,4.092,41.526)
C4': (28.494,2.981,45.243)
C2': (28.214,5.277,45.964)
O2': (28.080,6.062,47.127)
N1: (34.169,7.274,45.857)
N2: (34.306,6.326,47.957)
N3: (32.382,5.957,46.723)
N7: (31.375,7.076,43.459)
N9: (30.558,5.833,45.121)
O5': (28.046,4.049,43.123)
O3': (27.463,3.320,47.347)
Image (generated by PyMOL):